Antonio Fernandez Guerra

Antonio Fernandez Guerra

Tenure Track Assistant Professor


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  1. Phylogenetic ecology of widespread uncultured clades of the Kingdom Euryarchaeota

    Barberán, A., Fernandez Guerra, Antonio, Auguet, J., Galand, P. E. & Casamayor, E. O., 2011, In: Molecular Ecology. 20, 9, p. 1988-1996

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Exploration of community traits as ecological markers in microbial metagenomes

    Barberán, A., Fernandez Guerra, Antonio, Bohannan, B. J. M. & Casamayor, E. O., 2012, In: Molecular Ecology. 21, 8, p. 1909-1917

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Organic matter processing by microbial communities throughout the Atlantic water column as revealed by metaproteomics

    Bergauer, K., Fernandez Guerra, Antonio, Garcia, J. A. L., Sprenger, R. R., Stepanauskas, R., Pachiadaki, M. G., Jensen, O. N. & Herndl, G. J., 16 Jan 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 3, p. E400-E408 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Recurrent patterns of microdiversity in a temperate coastal marine environment

    Chafee, M., Fernandez Guerra, Antonio, Buttigieg, P. L., Gerdts, G., Eren, A. M., Teeling, H. & Amann, R. I., Jan 2018, In: ISME Journal. 12, 1, p. 237-252 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean

    Delmont, T. O., Gaia, M., Hinsinger, D. D., Frémont, P., Vanni, C., Fernandez-Guerra, A., Eren, A. M., Kourlaiev, A., d'Agata, L., Clayssen, Q., Villar, E., Labadie, K., Cruaud, C., Poulain, J., Da Silva, C., Wessner, M., Noel, B., Aury, J-M., Sunagawa, S., Acinas, S. G. & 30 others, Bork, P., Karsenti, E., Bowler, C., Sardet, C., Stemmann, L., de Vargas, C., Wincker, P., Lescot, M., Babin, M., Gorsky, G., Grimsley, N., Guidi, L., Hingamp, P., Jaillon, O., Kandels, S., Iudicone, D., Ogata, H., Pesant, S., Sullivan, M. B., Not, F., Lee, K. B., Boss, E., Cochrane, G., Follows, M., Poulton, N., Raes, J., Sieracki, M., Speich, S., Pelletier, E. & Tara Oceans Coordinators, T. O. C., 2022, In: Cell Genomics. 2, 5, 17 p., 100123.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Functional repertoire convergence of distantly related eukaryotic plankton lineages revealed by genome-resolved metagenomics

    Delmont, T. O., Gaia, M., Hinsinger, D. D., Fremont, P., Vanni, C., Fernandez Guerra, A., Eren, A. M., Kourlaiev, A., d'Agata, L., Clayssen, Q., Villar, E., Labadie, K., Cruaud, C., Poulain, J., Da Silva, C., Wessner, M., Noel, B., Aury, J-M., de Vargas, C., Bowler, C. & 4 others, Karsenti, E., Pelletier, E., Wincker, P. & Jaillon, O., 23 Jan 2021, 30 p. (bioRxiv).

    Research output: Working paper › Preprint › Research

  7. Published

    Community-led, integrated, reproducible multi-omics with anvi'o

    Eren, A. M., Kiefl, E., Shaiber, A., Veseli, I., Miller, S. E., Schechter, M. S., Fink, I., Pan, J. N., Yousef, M., Fogarty, E. C., Trigodet, F., Watson, A. R., Esen, O. C., Moore, R. M., Clayssen, Q., Lee, M. D., Kivenson, V., Graham, E. D., Merrill, B. D., Karkman, A. & 14 others, Blankenberg, D., Eppley, J. M., Sjodin, A., Scott, J. J., Vazquez-Campos, X., McKay, L. J., McDaniel, E. A., Stevens, S. L. R., Anderson, R. E., Fuessel, J., Fernandez Guerra, Antonio, Maignien, L., Delmont, T. O. & Willis, A. D., 2021, In: Nature Microbiology. 6, 1, p. 3-6 4 p.

    Research output: Contribution to journal › Editorial › Research › peer-review

  8. Habitat-Associated Phylogenetic Community Patterns of Microbial Ammonia Oxidizers

    Fernandez Guerra, Antonio & Casamayor, E. O., 2012, In: PLoS ONE. 7, 10, 9 p., e47330.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Patterns and architecture of genomic islands in marine bacteria

    Fernandez-Gomez, B., Fernandez Guerra, Antonio, Casamayor, E. O., Gonzalez, J. M., Pedros-Alio, C. & Acinas, S. G., 2012, In: BMC Genomics. 13, 19 p., 347.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. The genomic repertoire for cell cycle control and DNA metabolism in S. purpuratus

    Fernandez Guerra, Antonio, Aze, A., Morales, J., Mulner-Lorillon, O., Cosson, B., Cormier, P., Bradham, C., Adams, N., Robertson, A. J., Marzluff, W. F., Coffman, J. A. & Geneviere, A., 2006, In: Developmental Biology. 300, 1, p. 238-251

    Research output: Contribution to journal › Review › Research › peer-review

  11. T-RFPred: a nucleotide sequence size prediction tool for microbial community description based on terminal-restriction fragment length polymorphism chromatograms

    Fernandez Guerra, Antonio, Buchan, A., Mou, X., Casamayor, E. O. & Gonzalez, J. M., 2010, In: BMC Microbiology. 10, 7 p., 262.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Decoding the ocean's microbiological secrets for marine enzyme biodiscovery

    Ferrer, M., Mendez-Garcia, C., Bargiela, R., Chow, J., Alonso, S., Garcia-Moyano, A., Bjerga, G. E. K., Steen, I. H., Schwabe, T., Blom, C., Vester, J., Weckbecker, A., Shahgaldian, P., de Carvalho, C. C. C. R., Meskys, R., Zanaroli, G., Gloeckner, F. O., Fernandez-Guerra, A., Thambisetty, S., de la Calle, F. & 9 others, Golyshina, O. V., Yakimov, M. M., Jaeger, K., Yakunin, A. F., Streit, W. R., McMeel, O., Calewaert, J., Tonne, N. & Golyshin, P. N., 2019, In: FEMS Microbiology Letters. 366, 1

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. A close relationship between primary nucleotides sequence structure and the composition of functional genes in the genome of prokaryotes

    Garcia, J. A. L., Fernandez Guerra, Antonio & Casamayor, E. O., 2011, In: Molecular Phylogenetics and Evolution. 61, 3, p. 650-658

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Mirusviruses link herpesviruses to giant viruses

    Gaïa, M., Meng, L., Pelletier, E., Forterre, P., Vanni, C., Fernandez Guerra, Antonio, Jaillon, O., Wincker, P., Ogata, H., Krupovic, M. & Delmont, T. O., 2023, In: Nature. 616, 7958, p. 783-789 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Genomics of the Proteorhodopsin-Containing Marine Flavobacterium Dokdonia sp. Strain MED134

    Gonzalez, J. M., Pinhassi, J., Fernandez-Gomez, B., Coll-Llado, M., Gonzalez-Velazquez, M., Puigbo, P., Jaenicke, S., Gomez-Consarnau, L., Fernandez Guerra, Antonio, Goesmann, A. & Pedros-Alio, C., 2011, In: Applied and Environmental Microbiology. 77, 24, p. 8676-8686

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Genome analysis of the proteorhodopsin-containing marine bacterium Polaribacter sp. MED152 (Flavobacteria)

    Gonzalez, J. M., Fernandez-Gomez, B., Fernandez Guerra, Antonio, Gomez-Consarnau, L., Sanchez, O., Coll-Llado, M., del Campo, J., Escudero, L., Rodriguez-Martinez, R., Alonso-Sáez, L., Latasa, M., Paulsen, I., Nedashkovskaya, O., Lekunberri, I., Pinhassi, J. & Pedros-Alio, C., 2008, In: Proceedings of the National Academy of Sciences of the United States of America. 105, 25, p. 8724-8729

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Future Science Brief - Big Data in Marine Science

    Guidi, L., Fernandez Guerra, Antonio, Canchaya, C., Curry, E., Foglini, F., Irisson, J., Malde, K., Marshall, T. C., Obst, M., Ribeiro, R. P., Tjiputra, J. & Bakker, D. C. E., 2020, 52 p.

    Research output: Book/Report › Book › Research › peer-review

  18. BioVeL: a virtual laboratory for data analysis and modelling in biodiversity science and ecology

    Hardisty, A. R., Bacall, F., Beard, N., Balcazar-Vargas, M-P., Balech, B., Barcza, Z., Bourlat, S. J., De Giovanni, R., de Jong, Y., De Leo, F., Dobor, L., Donvito, G., Fellows, D., Fernandez Guerra, A., Ferreira, N., Fetyukova, Y., Fosso, B., Giddy, J., Goble, C., Guentsch, A. & 31 others, Haines, R., Ernst, V. H., Hettling, H., Hidy, D., Horvath, F., Ittzes, D., Ittzes, P., Jones, A., Kottmann, R., Kulawik, R., Leidenberger, S., Lyytikainen-Saarenmaa, P., Mathew, C., Morrison, N., Nenadic, A., de la Hidalga, A. N., Obst, M., Oostermeijer, G., Paymal, E., Pesole, G., Pinto, S., Poigne, A., Fernandez, F. Q., Santamaria, M., Saarenmaa, H., Sipos, G., Sylla, K., Tahtinen, M., Vicario, S., Vos, R. A. & BioVeL, B., 2016, In: BMC Ecology. 16, 16 p., 49.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    A 2-million-year-old ecosystem in Greenland uncovered by environmental DNA

    Kjær, K. H., Pedersen, M. W., De Sanctis, B., De Cahsan, B., Korneliussen, T. S., Michelsen, C. S., Sand, K. K., Jelavić, S., Ruter, A. H., Schmidt, A. M. A., Kjeldsen, K. K., Tesakov, A. S., Snowball, I., Gosse, J. C., Alsos, I. G., Wang, Y., Dockter, C., Rasmussen, M., Jørgensen, M. E., Skadhauge, B. & 19 others, Prohaska, Ana, Kristensen, J. Å., Bjerager, M., Allentoft, Morten Erik, Coissac, E., Rouillard, Alexandra, Simakova, A., Fernandez Guerra, Antonio, Bowler, C., Macias-Fauria, M., Vinner, Lasse, Welch, J. J., Hidy, A. J., Sikora, Martin, Collins, Matthew James, Durbin, R., Larsen, Nicolaj Krog, Willerslev, Eske & PhyloNorway Consortium, P. C., 2022, In: Nature. 612, 7939, p. 283-291 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. The ocean sampling day consortium

    Kopf, A., Bicak, M., Kottmann, R., Schnetzer, J., Kostadinov, I., Lehmann, K., Fernandez-Guerra, A., Jeanthon, C., Rahav, E., Ullrich, M., Wichels, A., Gerdts, G., Polymenakou, P., Kotoulas, G., Siam, R., Abdallah, R. Z., Sonnenschein, E. C., Cariou, T., O'Gara, F., Jackson, S. & 31 others, Orlic, S., Steinke, M., Busch, J., Duarte, B., Caçador, I., Canning-Clode, J., Bobrova, O., Marteinsson, V., Reynisson, E., Loureiro, C. M., Luna, G. M., Quero, G. M., Loescher, C. R., Kremp, A., DeLorenzo, M. E., Ovreas, L., Tolman, J., LaRoche, J., Penna, A., Frischer, M., Davis, T., Katherine, B., Meyer, C. P., Ramos, S., Magalhaes, C., Jude-Lemeilleur, F., Leopoldina Aguirre-Macedo, M., Wang, S., Poulton, N., Martin, P. & OSD, O., 2015, In: GigaScience. 4, 5 p., 27.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  21. Published

    Linking Spatial and Temporal Dynamic of Bacterioplankton Communities With Ecological Strategies Across a Coastal Frontal Area

    Lemonnier, C., Perennou, M., Eveillard, D., Fernandez Guerra, Antonio, Leynaert, A., Marie, L., Morrison, H. G., Memery, L., Paillard, C. & Maignien, L., 2020, In: Frontiers in Marine Science. 7, 13 p., 376.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Determinants and Prediction of Esterase Substrate Promiscuity Patterns

    Martinez-Martinez, M., Coscolin, C., Santiago, G., Chow, J., Stogios, P. J., Bargiela, R., Gertler, C., Navarro-Fernandez, J., Bollinger, A., Thies, S., Mendez-Garcia, C., Popovic, A., Brown, G., Chernikova, T. N., Garcia-Moyano, A., Bjerga, G. E. K., Perez-Garcia, P., Hai, T., Del Pozo, M. V., Stokke, R. & 22 others, Steen, I. H., Cui, H., Xu, X., Nocek, B. P., Alcaide, M., Distaso, M., Mesa, V., Pelaez, A. I., Sanchez, J., Buchholz, P. C. F., Pleiss, J., Fernandez Guerra, Antonio, Gloeckner, F. O., Golyshina, O. V., Yakimov, M. M., Savchenko, A., Jaeger, K., Yakunin, A. F., Streit, W. R., Golyshin, P. N., Guallar, V. & Ferrer, M., Jan 2018, In: ACS chemical biology. 13, 1, p. 225-234 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Meta-SourceTracker: application of Bayesian source tracking to shotgun metagenomics

    McGhee, J. J., Rawson, N., Bailey, B. A., Fernandez Guerra, Antonio, Sisk-Hackworth, L. & Kelley, S. T., 2020, In: PeerJ. 8, 18 p., 8783.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Genomic adaptation of giant viruses in polar oceans

    Meng, L., Delmont, T. O., Gaïa, M., Pelletier, E., Fernandez Guerra, Antonio, Chaffron, S., Neches, R. Y., Wu, J., Kaneko, H., Endo, H. & Ogata, H., 2023, In: Nature Communications. 14, 12 p., 6233.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Renewal of planktonic foraminifera diversity after the Cretaceous Paleogene mass extinction by benthic colonizers

    Morard, R., Hassenrück, C., Greco, M., Fernandez Guerra, Antonio, Rigaud, S., Douady, C. J. & Kucera, M., 2022, In: Nature Communications. 13, 9 p., 7135.

    Research output: Contribution to journal › Journal article › Research › peer-review

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ID: 235125386