Jacob Agerbo Rasmussen

Jacob Agerbo Rasmussen

Postdoc


Publication year:
  1. 2024
  2. Published

    A zebrafish model to elucidate the impact of host genes on the microbiota

    Þormar, Eirikur Andri, Rasmussen, Jacob Agerbo, Mathiessen, Heidi, Marana, Moonika Haahr, Clausen, C. G., Hansen, M., Kodama, M., Jørgensen, Louise von Gersdorff & Limborg, Morten Tønsberg, 2024, In: Environmental DNA. 6, 1, 20 p., e513.

    Research output: Contribution to journalJournal articlepeer-review

  3. Published

    Ancient reindeer mitogenomes reveal island-hopping colonisation of the Arctic archipelagos

    Hold, K., Lord, E., Brealey, Jaelle, Le Moullec, M., Bieker, V. C., Ellegaard, M. R., Rasmussen, Jacob Agerbo, Kellner, F. L., Guschanski, K., Yannic, G., Røed, K. H., Hansen, B. B., Dalén, L., Martin, M. D. & Dussex, N., 2024, In: Scientific Reports. 14, 14 p., 4143.

    Research output: Contribution to journalJournal articlepeer-review

  4. Published

    Exploring the microbial diversity of novel misos with metagenomics

    Kothe, C. I., Rasmussen, Jacob Agerbo, Mak, Sarah Siu Tze, Gilbert, M Thomas P & Evans, J., 2024, In: Food Microbiology. 117, 9 p., 104372.

    Research output: Contribution to journalJournal articlepeer-review

  5. Published

    Host-gut microbiota interactions shape parasite infections in farmed Atlantic salmon

    Brealey, Jaelle, Kodama, M., Rasmussen, Jacob Agerbo, Hansen, Søren Blikdal, Santos-Bay, Luisa, Lecaudey, L. A., Hansen, M., Fjære, E., Myrmel, L. S., Madsen, L., Bernhard, A., Sveier, H., Kristiansen, Karsten, Gilbert, M Thomas P, Martin, M. D. & Limborg, Morten Tønsberg, 2024, In: mSystems. 9, 2, 29 p., e01043-23.

    Research output: Contribution to journalJournal articlepeer-review

  6. 2023
  7. Published

    Adaptation to the High-Arctic island environment despite long-term reduced genetic variation in Svalbard reindeer

    Dussex, N., Tørresen, O. K., van der Valk, T., Le Moullec, M., Veiberg, V., Tooming-Klunderud, A., Skage, M., Garmann-Aarhus, B., Wood, J., Rasmussen, Jacob Agerbo, Pedersen, Å. Ø., Martin, S. L. F., Røed, K. H., Jakobsen, K. S., Dalén, L., Hansen, B. B. & Martin, M. D., 2023, In: iScience. 26, 10, 16 p., 107811.

    Research output: Contribution to journalJournal articlepeer-review

  8. Published

    An ethnographic framework for identifying dog sledding in the archaeological record

    Vitale, Emma Giovanna, Rasmussen, Jacob Agerbo, Grønnow, B., Hansen, Anders Johannes, Meldgaard, Morten & Feuerborn, Tatiana Richtman, 2023, In: Journal of Archaeological Science. 159, 10 p., 105856.

    Research output: Contribution to journalJournal articlepeer-review

  9. Published

    Co-diversification of an intestinal Mycoplasma and its salmonid host

    Rasmussen, Jacob Agerbo, Kiilerich, P., Madhun, A. S., Waagbø, R., Lock, E. J. R., Madsen, L., Gilbert, M Thomas P, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2023, In: ISME Journal. 17, 5, p. 682-692 11 p.

    Research output: Contribution to journalJournal articlepeer-review

  10. Published

    Genome-resolving metagenomics reveals wild western capercaillies (Tetrao urogallus) as avian hosts for antibiotic-resistance bacteria and their interactions with the gut-virome community

    Rasmussen, Jacob Agerbo & Chua, P. Y. S., 2023, In: Microbiological Research. 271, 11 p., 127372.

    Research output: Contribution to journalJournal articlepeer-review

  11. Published

    Genomic diversity and differentiation between island and mainland populations of white-tailed eagles (Haliaeetus albicilla)

    Hansen, C. C. R., Láruson, Á. J., Rasmussen, Jacob Agerbo, Ballesteros, J. A. C., Sinding, Mikkel Holger Strander, Hallgrimsson, G. T., von Schmalensee, M., Stefansson, R. A., Skarphédinsson, K. H., Labansen, A. L., Leivits, M., Sonne, C., Dietz, R., Skelmose, K., Boertmann, D., Eulaers, I., Martin, M. D., Helgason, A. S., Gilbert, M Thomas P & Pálsson, S., 2023, In: Molecular Ecology. 32, 8, p. 1925-1942 18 p.

    Research output: Contribution to journalJournal articlepeer-review

  12. Published

    Unexpected fishy microbiomes

    Limborg, Morten Tønsberg, Chua, P. Y. S. & Rasmussen, Jacob Agerbo, 2023, In: Nature Reviews Microbiology. 21, 6, p. 346 1 p.

    Research output: Contribution to journalComment/debatepeer-review

  13. 2022
  14. Published
  15. Published

    A strategic model of a host-microbe-microbe system reveals the importance of a joint host-microbe immune response to combat stress-induced gut dysbiosis

    Scheuring, I., Rasmussen, Jacob Agerbo, Bozzi, D. & Limborg, Morten Tønsberg, 2022, In: Frontiers in Microbiology. 13, 12 p., 912806.

    Research output: Contribution to journalJournal articlepeer-review

  16. Published

    Distinctive mitogenomic lineages within populations of White-tailed Eagles: [Inkl. Corrigendum]

    Hansen, C. C. R., Baleka, S., Guðjónsdóttir, S. M., Rasmussen, Jacob Agerbo, Ballesteros, J. A. C., Hallgrimsson, G. T., Stefansson, R. A., von Schmalensee, M., Skarphedinsson, K. H., Labansen, A. L., Leivits, M., Skelmose, K., Sonne, C., Dietz, R., Boertmann, D., Eulaers, I., Martin, M. D. & Pálsson, S., 2022, In: Ornithology. 139, 2, 14 p., ukab081.

    Research output: Contribution to journalJournal articlepeer-review

  17. Published

    Genomic evidence refutes the hypothesis that the Bornean banteng is a distinct species

    Sun, Xin, Ciucani, M. M., Rasmussen, Jacob Agerbo, Gilbert, M Thomas P & Sinding, Mikkel Holger Strander, 2022, In: BMC Ecology and Evolution. 22, 4 p., 110.

    Research output: Contribution to journalJournal articlepeer-review

  18. Published

    How salmon hooked me: Host-microbe interactions in aquaculture

    Rasmussen, Jacob Agerbo, 2022, Department of Biology, Faculty of Science, University of Copenhagen. 111 p.

    Research output: Book/ReportPh.D. thesis

  19. Published
  20. Published

    Microbiome "Inception": an Intestinal Cestode Shapes a Hierarchy of Microbial Communities Nested within the Host

    Brealey, Jaelle, Lecaudey, L. A., Kodama, M., Rasmussen, Jacob Agerbo, Sveier, H., Dheilly, N. M., Martin, M. D. & Limborg, Morten Tønsberg, 2022, In: mBio. 13, 3, 14 p., e00679-22.

    Research output: Contribution to journalJournal articlepeer-review

  21. Published

    Rhizosphere bacterial communities differ among traditional maize landraces

    Lund, M., Rasmussen, Jacob Agerbo, Ramos Madrigal, Jazmin, Sawers, R., Gilbert, M Thomas P & Barnes, Christopher James, 2022, In: Environmental DNA. 4, 6, p. 1241-1249 9 p.

    Research output: Contribution to journalJournal articlepeer-review

  22. Published

    Taking metagenomics under the wings

    Chua, Physilia & Rasmussen, Jacob Agerbo, 2022, In: Nature Reviews Microbiology. 20, 8, p. 447 1 p.

    Research output: Contribution to journalComment/debatepeer-review

  23. Published

    The Australian dingo is an early offshoot of modern breed dogs

    Field, M. A., Yadav, S., Dudchenko, O., Esvaran, M., Rosen, B. D., Skvortsova, K., Edwards, R. J., Keilwagen, J., Cochran, B. J., Manandhar, B., Bustamante, S., Rasmussen, J. A., Melvin, R. G., Chernoff, B., Omer, A., Colaric, Z., Chan, E. K. F., Minoche, A. E., Smith, T. P. L., Gilbert, M. T. P. & 5 others, Bogdanovic, O., Zammit, R. A., Thomas, T., Aiden, E. L. & Ballard, J. W. O., 2022, In: Science Advances. 8, 16, 14 p., eabm5944.

    Research output: Contribution to journalJournal articlepeer-review

  24. 2021
  25. Published

    Feasibility of applying shotgun metagenomic analyses to grapevine leaf, rhizosphere and soil microbiome characterisation

    Azevedo-Silva, D., Rasmussen, Jacob Agerbo, Carneiro, M., Gilbert, M Thomas P & Azevedo, H., 2021, In: Australian Journal of Grape and Wine Research. 27, 4, p. 519-526 8 p.

    Research output: Contribution to journalJournal articlepeer-review

  26. Published
  27. Published

    Kouprey (Bos sauveli) genomes unveil polytomic origin of wild Asian Bos

    Sinding, M. S., Ciucani, M. M., Ramos Madrigal, Jazmin, Carmagnini, A., Rasmussen, Jacob Agerbo, Feng, S., Chen, G., Vieira, Filipe Garrett, Mattiangeli, V., Ganjoo, R. K., Larson, G., Sicheritz-Pontén, Thomas, Petersen, Bent, Frantz, L., Gilbert, M Thomas P & Bradley, D. G., 2021, In: iScience. 24, 11, 18 p., 103226.

    Research output: Contribution to journalJournal articlepeer-review

  28. Published

    Molecular parallelisms between pigmentation in the avian iris and the integument of ectothermic vertebrates

    Andrade, P., Gazda, M. A., Araújo, P. M., Afonso, S., Rasmussen, Jacob Agerbo, Marques, C. I., Lopes, R. J., Gilbert, M Thomas P & Carneiro, M., 2021, In: PLOS Genetics. 17, 2, 16 p., 1009404.

    Research output: Contribution to journalJournal articlepeer-review

  29. Published

    Salmon gut microbiota correlates with disease infection status: potential for monitoring health in farmed animals

    Bozzi, D., Rasmussen, Jacob Agerbo, Carøe, C., Sveier, H., Nordøy, K., Gilbert, M Thomas P & Limborg, Morten Tønsberg, 2021, In: BMC Animal Microbiome. 3, 1, 17 p., 30.

    Research output: Contribution to journalJournal articlepeer-review

  30. Published

    eDNA‐based biomonitoring at an experimental German vineyard to characterize how management regimes shape ecosystem diversity

    Rasmussen, Jacob Agerbo, Nielsen, M., Mak, Sarah Siu Tze, Döring, J., Klincke, F., Gopalakrishnan, Shyam, Dunn, Rob, Kauer, R. & Gilbert, M Thomas P, 2021, In: Environmental DNA. 3, 1, p. 70-82 12 p.

    Research output: Contribution to journalJournal articlepeer-review

  31. 2020
  32. Published

    Metagenomic analysis of historical herbarium specimens reveals a postmortem microbial community

    Bieker, V. C., Barreiro, F. S., Rasmussen, Jacob Agerbo, Brunier, M., Wales, N. & Martin, M. D., 2020, In: Molecular Ecology Resources. 20, 5, p. 1206-1219 14 p.

    Research output: Contribution to journalJournal articlepeer-review

ID: 215672180