Jonas Niemann

Jonas Niemann

Assistant Professor


  1. 2024
  2. Published
  3. 2023
  4. Published

    The ancestry and geographical origins of St Helena's liberated Africans

    Sandoval-Velasco, Marcela, Jagadeesan, A., Ramos Madrigal, Jazmin, Ávila-Arcos, M. C., Fortes-Lima, C. A., Watson, J., Johannesdóttir, E., Cruz-Dávalos, D. I., Gopalakrishnan, Shyam, Moreno Mayar, J. Víctor, Niemann, Jonas, Renaud, G., Brown, K. A. R., Bennett, H., Pearson, A., Helgason, A., Gilbert, M Thomas P & Schroeder, Hannes, 2023, In: American Journal of Human Genetics. 110, 9, p. 1590-1599 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  5. 2022
  6. Published

    Probing the genomic limits of de-extinction in the Christmas Island rat

    Lin, J., Duchene, David, Carøe, C., Smith, O., Ciucani, M. M., Niemann, Jonas, Richmond, D., Greenwood, A. D., MacPhee, R., KU, thw266, Gopalakrishnan, Shyam & Gilbert, M Thomas P, 2022, In: Current Biology. 32, 7, p. 1650-1656.e3

    Research output: Contribution to journalJournal articlepeer-review

  7. 2021
  8. Published

    Extended survival of Pleistocene Siberian wolves into the early 20th century on the island of Honshu

    Niemann, Jonas, Gopalakrishnan, Shyam, Yamaguchi, N., Ramos Madrigal, Jazmin, Wales, N., Gilbert, M Thomas P & Sinding, M. S., 2021, In: iScience. 24, 25 p., 101904.

    Research output: Contribution to journalJournal articlepeer-review

  9. Published

    Fungal mycelial mats used as textile by indigenous people of North America

    Blanchette, R. A., Haynes, D. T., Held, B. W., Niemann, Jonas & Wales, N., 2021, In: Mycologia. 113, 2, p. 261-267 7 p.

    Research output: Contribution to journalJournal articlepeer-review

  10. Published

    The genetic impact of an Ebola outbreak on a wild gorilla population

    Fontsere, C., Frandsen, P., Hernandez-Rodriguez, J., Niemann, Jonas, Scharff-Olsen, Camilla Hjorth, Vallet, D., Le Gouar, P., Ménard, N., Navarro, A., Siegismund, Hans Redlef, Hvilsom, C., Gilbert, M Thomas P, Kuhlwilm, M., Hughes, D. & Marques-Bonet, T., 2021, In: BMC Genomics. 22, 12 p., 735.

    Research output: Contribution to journalJournal articlepeer-review

  11. 2020
  12. Published

    Arctic-adapted dogs emerged at the Pleistocene-Holocene transition

    Sinding, M. H. S., Gopalakrishnan, S., Ramos-Madrigal, J., de Manuel, M., Pitulko, V. V., Kuderna, L., Feuerborn, T. R., Frantz, L. A. F., Vieira, F. G., Niemann, J., Samaniego Castruita, J. A., Carøe, C., Andersen-Ranberg, E. U., Jordan, P. D., Pavlova, E. Y., Nikolskiy, P. A., Kasparov, A. K., Ivanova, V. V., Willerslev, E., Skoglund, P. & 15 others, Fredholm, Merete, Wennerberg, S. E., Heide-Jørgensen, M. P., Dietz, R., Sonne, C., Meldgaard, Morten, Dalén, L., Larson, G., Petersen, Bent, Sicheritz-Pontén, Thomas, Bachmann, L., Wiig, Ø., Marques-Bonet, T., Hansen, Anders Johannes & Gilbert, M Thomas P, 2020, In: Science (New York, N.Y.). 368, 6498, p. 1495-1499 5 p.

    Research output: Contribution to journalJournal articlepeer-review

  13. Published

    Genomes of Pleistocene Siberian Wolves Uncover Multiple Extinct Wolf Lineages

    Ramos-Madrigal, J., Sinding, M-H. S., Carøe, C., Mak, S. S. T., Niemann, J., Samaniego Castruita, J. A., Fedorov, S., Kandyba, A., Germonpré, M., Bocherens, H., Feuerborn, T. R., Pitulko, V. V., Pavlova, E. Y., Nikolskiy, P. A., Kasparov, A. K., Ivanova, V. V., Larson, G., Frantz, L. A. F., Willerslev, E., Meldgaard, M. & 7 others, Petersen, Bent, Sicheritz-Pontén, Thomas, Bachmann, L., Wiig, Ø., Hansen, Anders Johannes, Gilbert, M Thomas P & Gopalakrishnan, Shyam, 2020, In: Current biology : CB. 31, p. 198-206

    Research output: Contribution to journalJournal articlepeer-review

  14. 2019
  15. Published

    A 5700 year-old human genome and oral microbiome from chewed birch pitch

    Jensen, T. Z. T., Niemann, J., Iversen, K. H., Fotakis, A. K., Gopalakrishnan, S., Vågene, Å. J., Pedersen, M. W., Sinding, M-H. S., Ellegaard, M. R., Allentoft, M. E., Lanigan, L. T., Taurozzi, A. J., Nielsen, S. H., Dee, M. W., Mortensen, M. N., Christensen, M. C., Sørensen, S. A., Collins, M. J., Gilbert, M. T. P., Sikora, M. & 2 others, Rasmussen, Simon & Schroeder, Hannes, 2019, In: Nature Communications. 10, 10 p., 5520.

    Research output: Contribution to journalJournal articlepeer-review

  16. Published

    Demographic reconstruction from ancient DNA supports rapid extinction of the great auk

    Thomas, J. E., Carvalho, G. R., Haile, J., Rawlence, N. J., Martin, M. D., Ho, S. Y. W., Sigfusson, A. P., Josefsson, V. A., Frederiksen, M., Linnebjerg, J. F., Castruita, J. A. S., Niemann, J., Sinding, M-H. S., Sandoval-Velasco, M., Soares, A. E. R., Lacy, R., Barilaro, C., Best, J., Brandis, D., Cavallo, C. & 17 others, Elorza, M., Garrett, K. L., Groot, M., Johansson, F., Lifjeld, J. T., Nilson, G., Serjeanston, D., Sweet, P., Fuller, E., Hufthammer, A. K., Meldgaard, Morten, Fjeldså, Jon, Shapiro, B., Hofreiter, M., Stewart, J. R., Gilbert, M Thomas P & Knapp, M., 2019, In: eLife. 8, 35 p., e47509.

    Research output: Contribution to journalJournal articlepeer-review

  17. Published

    Elucidating the past using ancient genomes and metagenomes

    Niemann, Jonas, 2019, Natural History Museum of Denmark, Faculty of Science, University of Copenhagen. 255 p.

    Research output: Book/ReportPh.D. thesis

  18. Published

    False-negative detections from environmental DNA collected in the presence of large numbers of killer whales (Orcinus orca)

    Pinfield, R., Dillane, E., Runge, Anne Kathrine Wiborg, Evans, A., Mirimin, L., Niemann, Jonas, Reed, T. E., Reid, D. G., Rogan, E., Samarra, F. I. P., Sigsgaard, E. E. & Foote, A. D., 2019, In: Environmental DNA. 1, 4, p. 316-328 13 p.

    Research output: Contribution to journalJournal articlepeer-review

  19. Published

    Palaeoproteomics of bird bones for taxonomic classification

    Horn, I. R., Kenens, Y., Palmblad, N. M., Van Der Plas-Duivesteijn, S. J., Langeveld, B. W., Meijer, H. J. M., Dalebout, H., Marissen, R. J., Fischer, A., Vincent Florens, F. B., Niemann, Jonas, Rijsdijk, K. F., Schulp, A. S., Laros, J. F. J. & Gravendeel, B., 2019, In: Zoological Journal of the Linnean Society. 186, 3, p. 650-665

    Research output: Contribution to journalJournal articlepeer-review

  20. 2018
  21. Published

    Interspecific Gene Flow Shaped the Evolution of the Genus Canis

    Gopalakrishnan, S., Sinding, M. H. S., Ramos-Madrigal, J., Niemann, J., Samaniego Castruita, J. A., Vieira, F. G., Carøe, C., Montero, M. D. M., Kuderna, L., Serres, A., González-Basallote, V. M., Liu, Y. H., Wang, G. D., Marques-Bonet, T., Mirarab, S., Fernandes, C., Gaubert, P., Koepfli, K. P., Budd, J., Rueness, E. K. & 7 others, Heide-Jørgensen, M. P., Petersen, Bent, Sicheritz-Ponten, T., Bachmann, L., Wiig, Ø., Hansen, Anders Johannes & Gilbert, M. T. P., 2018, In: Current Biology. 28, 21, p. 3441-3449

    Research output: Contribution to journalJournal articlepeer-review

  22. Published
  23. 2017
  24. Published

    An ‛aukward’ tale: a genetic approach to discover the whereabouts of the last Great Auks

    Thomas, J. E., Carvalho, G. R., Haile, James Seymour, Martin, M. D., Samaniego Castruita, J. A., Niemann, Jonas, Sinding, Mikkel Holger Strander, Sandoval-Velasco, Marcela, Rawlence, N. J., Fuller, E., Fjeldså, Jon, Hofreiter, M., Stewart, J. R., Gilbert, M Thomas P & Knapp, M., 15 Jun 2017, In: Genes. 8, 6, 12 p., 164.

    Research output: Contribution to journalJournal articlepeer-review

ID: 164879285