Kristine Bohmann

Kristine Bohmann

Associate Professor


  1. 2023
  2. Published

    Airborne environmental DNA captures terrestrial vertebrate diversity in nature

    Lynggaard, Christina Islas, Frøslev, Tobias Guldberg, Johnson, Matthew Stanley, Olsen, Morten Tange & Bohmann, Kristine, 27 Jul 2023, In: Molecular Ecology Resources. 24, 1, 20 p., e13840.

    Research output: Contribution to journalJournal articlepeer-review

  3. Published

    Perspectives and Future Developments Within Sedimentary DNA Research

    Holman, Luke Earl, Wang, Yi, Sawafuji, Rikai, Epp, L. S., Bohmann, Kristine & Pedersen, Mikkel Winther, 2023, Tracking Environmental Change Using Lake Sediments: Sedimentary DNA. Capo, E., Barouillet, C. & Smol, J. P. (eds.). Springer, Vol. 6. p. 393-416 (Developments in Paleoenvironmental Research, Vol. 21).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  4. Published

    Transforming terrestrial biodiversity surveys using airborne eDNA

    Bohmann, Kristine & Lynggaard, Christina Islas, 2023, In: Trends in Ecology and Evolution. 38, 2, p. 119-121 3 p.

    Research output: Contribution to journalLetterpeer-review

  5. Published

    Use of carrion fly iDNA metabarcoding to monitor invasive and native mammals

    Fernandes, Kristen Marie Rose, Bateman, P. W., Saunders, B. J., Bunce, M., Bohmann, Kristine & Nevill, P., 2023, In: Conservation Biology. 37, 5, 12 p., e14098.

    Research output: Contribution to journalJournal articlepeer-review

  6. Published

    Vertebrate environmental DNA from leaf swabs

    Lynggaard, Christina Islas, Calvignac-Spencer, S., Chapman, C. A., Kalbitzer, U., Leendertz, F. H., Omeja, P. A., Opito, E. A., Sarkar, D., Bohmann, Kristine & Gogarten, J. F., 2023, In: Current Biology. 33, 16, p. R853-R854

    Research output: Contribution to journalComment/debatepeer-review

  7. 2022
  8. Published

    A two-step metagenomics approach for the identification and mitochondrial DNA contig assembly of vertebrate prey from the blood meals of common vampire bats (Desmodus rotundus)

    Chua, Physilia, Carøe, C., Crampton-Platt, A., Reyes-Avila, C. S., Jones, G., Streicker, D. G. & Bohmann, Kristine, 2022, In: Metabarcoding and Metagenomics. 6, p. 75-87 13 p.

    Research output: Contribution to journalJournal articlepeer-review

  9. Published
  10. Published
  11. Published

    Shunning the scoop: Sidestepping the race to publish

    Lynggaard, Christina Islas, Littlefair, J. E., Bohmann, Kristine & Clare, E. L., 2022, In: iScience. 25, 4, 8 p., 104080.

    Research output: Contribution to journalComment/debatepeer-review

  12. Published

    Strategies for sample labelling and library preparation in DNA metabarcoding studies

    Bohmann, Kristine, Elbrecht, V., Carøe, C., Bista, I., Leese, F., Bunce, M., Yu, D. W., Seymour, M., Dumbrell, A. J. & Creer, S., 2022, In: Molecular Ecology Resources. 22, 4, p. 1231-1246 16 p.

    Research output: Contribution to journalJournal articlepeer-review

  13. Published

    The potential of aquatic bloodfeeding and nonbloodfeeding leeches as a tool for iDNA characterisation

    Lynggaard, Christina Islas, Oceguera-Figueroa, A., Kvist, S., Gilbert, M Thomas P & Bohmann, Kristine, 2022, In: Molecular Ecology Resources. 22, 2, p. 539-553 15 p.

    Research output: Contribution to journalJournal articlepeer-review

  14. Published

    Toward global integration of biodiversity big data: a harmonized metabarcode data generation module for terrestrial arthropods

    Arribas, P., Andújar, C., Bohmann, Kristine, deWaard, J. R., Economo, E. P., Elbrecht, V., Geisen, S., Goberna, M., Krehenwinkel, H., Novotny, V., Zinger, L., Creedy, T. J., Meramveliotakis, E., Noguerales, V., Overcast, I., Morlon, H., Papadopoulou, A., Vogler, A. P. & Emerson, B. C., 2022, In: GigaScience. 11, 12 p., giac065.

    Research output: Contribution to journalJournal articlepeer-review

  15. 2021
  16. Published

    Biodiversity Soup II: A bulk-sample metabarcoding pipeline emphasizing error reduction

    Yang, C., Bohmann, Kristine, Wang, X., Cai, W., Wales, N., Ding, Z., Gopalakrishnan, Shyam & Yu, D. W., 2021, In: Methods in Ecology and Evolution. 12, 7, p. 1252-1264 13 p.

    Research output: Contribution to journalJournal articlepeer-review

  17. Published

    Connecting high-throughput biodiversity inventories: Opportunities for a site-based genomic framework for global integration and synthesis

    Arribas, P., Andujar, C., Bidartondo, M. I., Bohmann, K., Coissac, E., Creer, S., deWaard, J. R., Elbrecht, V., Ficetola, G. F., Goberna, M., Kennedy, S., Krehenwinkel, H., Leese, F., Novotny, V., Ronquist, F., Yu, D. W., Zinger, L., Creedy, T. J., Meramveliotakis, E., Noguerales, V. & 5 others, Overcast, I., Morlon, H., Vogler, A. P., Papadopoulou, A. & Emerson, B. C., 2021, In: Molecular Ecology. 30, 5, p. 1120-1135 16 p.

    Research output: Contribution to journalReviewpeer-review

  18. Published

    DNA metabarcoding reveals that African leopard diet varies between habitats

    Havmøller, Rasmus Worsøe, Jacobsen, N. S., Havmøller, L. W., Rovero, F., Scharff, Nikolaj & Bohmann, Kristine, 2021, In: African Journal of Ecology. 59, 1, p. 37-50 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  19. Published

    DNAqua-Net conference unites participants from around the world with the quest to standardize and implement DNA-based aquatic biomonitoring

    Bohmann, Kristine, Chua, Physilia, Holman, L. E. & Lynggaard, Christina Islas, 2021, In: Environmental DNA. 3, 5, p. 884-888 5 p.

    Research output: Contribution to journalComment/debatepeer-review

  20. Published

    Labelling strategies in metabarcoding studies & how to ensure that nucleotide tags stay in place

    Bohmann, Kristine & Carøe, C., 2021. 3 p.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  21. Published

    Metagenomics: A viable tool for reconstructing herbivore diet

    Chua, Physilia, Crampton-Platt, A., Lammers, Y., Alsos, I. G., Boessenkool, S. & Bohmann, Kristine, 2021, In: Molecular Ecology Resources. 21, 7, p. 2249-2263

    Research output: Contribution to journalJournal articlepeer-review

  22. Published

    Mitochondrial genomes of Danish vertebrate species generated for the national DNA reference database, DNAmark

    Margaryan, Ashot, Noer, Christina, Richter, S. R., Restrup, M. E., Bülow‐hansen, J. L., Leerhøi, Frederik, Langkjær, Emilia Marie Rolander, Gopalakrishnan, Shyam, Carøe, C., Gilbert, M Thomas P & Bohmann, Kristine, 2021, In: Environmental DNA. 3, 2, p. 472-480

    Research output: Contribution to journalJournal articlepeer-review

  23. Published

    Molecular dietary analyses of western capercaillies (Tetrao urogallus) reveal a diverse diet

    Chua, Physilia, Lammers, Y., Menoni, E., Ekrem, T., Bohmann, Kristine, Boessenkool, S. & Alsos, I. G., 2021, In: Environmental DNA. 3, 6, p. 1156-1171 16 p.

    Research output: Contribution to journalJournal articlepeer-review

  24. Published

    Towards the extended barcode concept: Generating DNA reference data through genome skimming of danish plants

    Chua, Physilia, Leerhøi, Frederik, Langkjær, Emilia Marie Rolander, Margaryan, Ashot, Noer, Christina, Richter, S. R., Restrup, M. E., Bruun, Hans Henrik, Hartvig, Ida, Coissac, E., Boessenkool, S., Alsos, I. G. & Bohmann, Kristine, 2021, 38 p. (bioRxiv).

    Research output: Working paperPreprintResearch

  25. 2020
  26. Published

    An appetite for pests: Synanthropic insectivorous bats exploit cotton pest irruptions and consume various deleterious arthropods

    Cohen, Y., Bar-David, S., Nielsen, M., Bohmann, Kristine & Korine, C., 2020, In: Molecular Ecology. 29, 6, p. 1185-1198 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  27. Published

    Beyond DNA barcoding: The unrealized potential of genome skim data in sample identification

    Bohmann, Kristine, Mirarab, S., Bafna, V. & Gilbert, M Thomas P, 2020, In: Molecular Ecology. 29, 14, p. 2521-2534

    Research output: Contribution to journalJournal articlepeer-review

  28. Published

    DNA-Based Arthropod Diversity Assessment in Amazonian Iron Mine Lands Show Ecological Succession Towards Undisturbed Reference Sites

    Lynggaard, Christina Islas, Yu, D. W., Oliveira, G., Caldeira, C. F., Ramos, S. J., Ellegaard, M. R., Gilbert, M Thomas P, Gastauer, M. & Bohmann, Kristine, 2020, In: Frontiers in Ecology and Evolution. 8, 15 p., 590976.

    Research output: Contribution to journalJournal articlepeer-review

  29. Published

    Tagsteady: A metabarcoding library preparation protocol to avoid false assignment of sequences to samples

    Carøe, C. & Bohmann, Kristine, 2020, In: Molecular Ecology Resources. 20, 6, p. 1620-1631 12 p.

    Research output: Contribution to journalJournal articlepeer-review

  30. 2019
  31. Published

    Systematics of West African Miniopterus with the description of a new species

    Monadjem, A., Shapiro, J. T., Richards, L. R., Karabulut, H., Crawley, W., Nielsen, Ida Broman, Hansen, Anders Johannes, Bohmann, Kristine & Mourier, T., Dec 2019, In: Acta Chiropterologica. 21, 2, p. 237-256

    Research output: Contribution to journalJournal articlepeer-review

  32. Published

    Promises and pitfalls of using high-throughput sequencing for diet analysis

    Alberdi, Antton, Aizpurua Arrieta, Ostaizka, Bohmann, Kristine, Gopalakrishnan, Shyam, Lynggaard, Christina Islas, Nielsen, M. & Gilbert, M Thomas P, Mar 2019, In: Molecular Ecology Resources. 19, 2, p. 327-348

    Research output: Contribution to journalReviewpeer-review

  33. Published

    A simplified DNA extraction protocol for unsorted bulk arthropod samples that maintains exoskeletal integrity

    Nielsen, M., Gilbert, M Thomas P, Pape, Thomas & Bohmann, Kristine, 2019, In: Environmental DNA. 1, 2, p. 144-154

    Research output: Contribution to journalJournal articlepeer-review

  34. Published

    Skmer: assembly-free and alignment-free sample identification using genome skims

    Sarmashghi, S., Bohmann, Kristine, Gilbert, M Thomas P, Bafna, V. & Mirarab, S., 2019, In: Genome Biology. 20, 20 p., 34.

    Research output: Contribution to journalJournal articlepeer-review

  35. Published

    Use of emerging complete organelle DNA reference database in the diet analysis of the herbivorous wood grouse, western capercaillies (Tetrao urogallus)

    Chua, Physilia, Boessenkool, S., Alsos, I. G., Ekrem, T., Crampton-Platt, A. & Bohmann, Kristine, 2019.

    Research output: Contribution to conferencePosterResearch

  36. Published

    Using metabarcoding to compare the suitability of two blood-feeding leech species for sampling mammalian diversity in North Borneo

    Drinkwater, R., Schnell, I. B., Bohmann, Kristine, Bernard, H., Veron, G., Clare, E., Gilbert, M Thomas P & Rossiter, S. J., 2019, In: Molecular Ecology Resources. 19, 1, p. 105-117

    Research output: Contribution to journalJournal articlepeer-review

  37. Published

    Vertebrate diversity revealed by metabarcoding of bulk arthropod samples from tropical forests

    Lynggaard, Christina Islas, Nielsen, M., Santos-Bay, Luisa, Gastauer, M., Oliveira, G. & Bohmann, Kristine, 2019, In: Environmental Engineering. 1, 4, p. 329-341

    Research output: Contribution to journalJournal articlepeer-review

  38. 2018
  39. Published

    Assembly-free and alignment-free sample identification using genome skims

    Sarmashghi, S., Bohmann, Kristine, Gilbert, M Thomas P, Bafna, V. & Mirarab, S., 1 Jan 2018, In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 10812, p. 276-277 2 p.

    Research output: Contribution to journalConference abstract in journalpeer-review

  40. Published

    Debugging diversity – a pan-continental exploration of the potential of terrestrial blood-feeding leeches as a vertebrate monitoring tool

    Schnell, I. B., Bohmann, K., Schultze, S. E., Richter, S. R., Murray, D. C., Sinding, M. H. S., Bass, D., Cadle, J. E., Campbell, M. J., Dolch, R., Edwards, D. P., Gray, T. N. E., Hansen, T., Hoa, A. N. Q., Noer, C. L., Heise-Pavlov, S., Sander Pedersen, A. F., Ramamonjisoa, J. C., Siddall, M. E., Tilker, A. & 7 others, Traeholt, C., Wilkinson, N., Woodcock, P., Yu, D. W., Bertelsen, Mads Frost, Bunce, M. & Gilbert, M Thomas P, 2018, In: Molecular Ecology Resources. 18, 6, p. 1282-1298 17 p.

    Research output: Contribution to journalJournal articlepeer-review

  41. Published

    Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat

    Zepeda Mendoza, M. L., Xiong, Z., Escalera-Zamudio, M., Runge, A. K. W., Thézé, J., Streicker, D., Frank, H. K., Loza-Rubio, E., Liu, S., Ryder, O. A., Castruita, J. A. S., Katzourakis, A., Pacheco, G. A., Taboada, B., Löber, U., Pybus, O. G., Li, Y., Rojas-Anaya, E., Bohmann, K., Carmona Baez, A. & 9 others, Arias, C. F., Liu, S., Greenwood, A. D., Bertelsen, Mads Frost, White, N. E., Bunce, M., KU, thw266, Sicheritz-Ponten, T. & Gilbert, M Thomas P, 2018, In: Nature Ecology & Evolution. 2, 4, p. 659-668 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  42. Published

    Scrutinizing key steps for reliable metabarcoding of environmental samples

    Alberdi, Antton, Aizpurua Arrieta, Ostaizka, Gilbert, M Thomas P & Bohmann, Kristine, 2018, In: Methods in Ecology and Evolution. 9, 1, p. 134-147 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  43. Published

    Using DNA metabarcoding for simultaneous inference of common vampire bat diet and population structure

    Bohmann, Kristine, Gopalakrishnan, Shyam, Nielsen, M., Santos-Bay, Luisa, Jones, G., Streicker, D. G. & Gilbert, M Thomas P, 2018, In: Molecular Ecology Resources. 18, 5, p. 1050-1063 14 p.

    Research output: Contribution to journalJournal articlepeer-review

  44. 2017
  45. Published

    Diet determined by next generation sequencing reveals pest consumption and opportunistic foraging by bats in macadamia orchards in South Africa

    Taylor, P. J., Matamba, E., Steyn, J. N. (., Nangammbi, T., Zepeda Mendoza, M. L. & Bohmann, Kristine, Dec 2017, In: Acta Chiropterologica. 19, 2, p. 239-254 16 p.

    Research output: Contribution to journalJournal articlepeer-review

  46. Published

    Connecting Earth observation to high-throughput biodiversity data

    Bush, A., Sollmann, R., Wilting, A., Bohmann, K., Cole, B., Balzter, H., Martius, C., Zlinszky, A., Calvignac-Spencer, S., Cobbold, C. A., Dawson, T. P., Emerson, B. C., Ferrier, S., Gilbert, T., Herold, M., Jones, L., Leendertz, F. H., Matthews, L., Millington, J. D. A., Olson, J. R. & 11 others, Ovaskainen, O., Raffaelli, D., Reeve, R., Rödel, M., Rodgers, T. W., Snape, S., Visseren-Hamakers, I., Vogler, A. P., White, P. C. L., Wooster, M. J. & Yu, D. W., 22 Jun 2017, In: Nature Ecology and Evolution. 1, 7, 0176.

    Research output: Contribution to journalReviewpeer-review

  47. 2016
  48. Published

    Do vertebrate gut metagenomes confer rapid ecological adaptation?

    Alberdi, Antton, Aizpurua Arrieta, Ostaizka, Bohmann, Kristine, Zepeda Mendoza, M. L. & Gilbert, M Thomas P, Sep 2016, In: Trends in Ecology & Evolution. 31, 9, p. 689-699 11 p.

    Research output: Contribution to journalJournal articlepeer-review

  49. Published

    DAMe: a toolkit for the initial processing of datasets with PCR replicates of double-tagged amplicons for DNA metabarcoding analyses

    Zepeda Mendoza, M. L., Bohmann, Kristine, Baez, A. C. & Gilbert, M Thomas P, 2016, In: BMC Research Notes. 9, 13 p., 255.

    Research output: Contribution to journalJournal articlepeer-review

  50. Published

    First record of Vespertilio murinus from the Arabian Peninsula

    Monadjem, A., Joubert, C., Richards, L., Nielsen, Ida Broman, Nielsen, M., Kjartansdóttir, K. R., Bohmann, Kristine, Mourier, T. & Hansen, Anders Johannes, 2016, In: Vespertilio. 18, p. 79-89 11 p.

    Research output: Contribution to journalJournal articlepeer-review

  51. 2015
  52. Published

    Ancient and modern environmental DNA

    Pedersen, Mikkel Winther, Overballe-Petersen, S., Ermini, L., Der Sarkissian, C., Haile, James Seymour, Hellström, A. M., Spens, J., Thomsen, P. F., Bohmann, Kristine, Cappellini, Enrico, Schnell, I. B., Wales, N., Carøe, C., Campos, P., Schmidt, A. M. Z., Gilbert, M Thomas P, Hansen, Anders Johannes, Orlando, L. A. A. & Willerslev, Eske, 2015, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 370, 1660, 11 p., 20130383.

    Research output: Contribution to journalReviewpeer-review

  53. Published

    Bats, Blood-Feeders and Biodiversity: Illumina Metabarcoding in Dietary Studies

    Bohmann, Kristine, 2015, Natural History Museum of Denmark, Faculty of Science, University of Copenhagen. 320 p.

    Research output: Book/ReportPh.D. thesis

  54. Published

    Tag jumps illuminated - reducing sequence-to-sample misidentifications in metabarcoding studies

    Schnell, I. B., Bohmann, Kristine & Gilbert, M Thomas P, 2015, In: Molecular Ecology Resources. 15, 6, p. 1289-1303 15 p.

    Research output: Contribution to journalJournal articlepeer-review

  55. 2014
  56. Published

    Environmental DNA for wildlife biology and biodiversity monitoring

    Bohmann, Kristine, Evans, A., Gilbert, M Thomas P, Carvalho, G. R., Creer, S., Knapp, M., Yu, D. W. & de Bruyn, M., 2014, In: Trends in Ecology & Evolution. 29, 6, p. 358-367 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  57. Published

    Second generation sequencing and morphological faecal analysis reveal unexpected foraging behaviour by Myotis nattereri (Chiroptera, Vespertilionidae) in winter

    Hope, P. R., Bohmann, Kristine, Gilbert, M Thomas P, Zepeda Mendoza, M. L., Razgour, O. & Jones, G., 2014, In: Frontiers in Zoology. 11, 15 p., 39.

    Research output: Contribution to journalJournal articlepeer-review

  58. 2013
  59. Published

    Hunting leeches in the dense forests of Madagascar

    Bohmann, Kristine, 2 Aug 2013

    Research output: Other contributionNet publication - Internet publicationCommunication

  60. Published

    When bugs reveal biodiversity

    Bohmann, Kristine, Schnell, I. B. & Gilbert, M Thomas P, 13 Feb 2013, In: Molecular Ecology. 22, 4, p. 909-911 3 p.

    Research output: Contribution to journalJournal articlepeer-review

  61. Published

    DNA detective work to solve riddles of conservation

    Bohmann, Kristine, 2013, In: Swara. 2013, 1, p. 50-53 4 p.

    Research output: Contribution to journalJournal article

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