Shyam Gopalakrishnan
Associate Professor
- Published
A 5700 year-old human genome and oral microbiome from chewed birch pitch
Jensen, T. Z. T., Niemann, J., Iversen, K. H., Fotakis, A. K., Gopalakrishnan, S., Vågene, Å. J., Pedersen, M. W., Sinding, M-H. S., Ellegaard, M. R., Allentoft, M. E., Lanigan, L. T., Taurozzi, A. J., Nielsen, S. H., Dee, M. W., Mortensen, M. N., Christensen, M. C., Sørensen, S. A., Collins, M. J., Gilbert, M. T. P., Sikora, M. & 2 others, , 2019, In: Nature Communications. 10, 10 p., 5520.Research output: Contribution to journal › Journal article › Research › peer-review
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A multi-omics approach unravels metagenomic and metabolic alterations of a probiotic and synbiotic additive in rainbow trout (Oncorhynchus mykiss)
Rasmussen, Jacob Agerbo, Villumsen, Kasper Rømer, Ernst, M., Hansen, M., Forberg, T., Gopalakrishnan, Shyam, Gilbert, M Thomas P, Bojesen, Anders Miki, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2022, In: Microbiome. 10, 19 p., 21.Research output: Contribution to journal › Journal article › Research › peer-review
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Adapting Genotyping-by-Sequencing and Variant Calling for Heterogeneous Stock Rats
Gileta, A. F., Gao, J., Chitre, A. S., Bimschleger, H., St Pierre, C. L., Gopalakrishnan, Shyam & Palmer, A. A., 2020, In: G3: Genes, Genomes, Genetics (Bethesda). 10, 7, p. 2195-2205 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Agriculture shapes the trophic niche of a bat preying on multiple pest arthropods across Europe: Evidence from DNA metabarcoding
Aizpurua Arrieta, Ostaizka, Budinski, I., Georgiakakis, P., Gopalakrishnan, Shyam, Ibanez, C., Mata, V., Rebelo, H., Russo, D., Szodoray-Paradi, F., Zhelyazkova, V., Zrncic, V., Gilbert, M Thomas P & Alberdi, Antton, 2018, In: Molecular Ecology. 27, 3, p. 815-825 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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An Anthropocene map of genetic diversity
Miraldo, A., Li, Sen, Borregaard, Michael Krabbe, Florez Rodriguez, A., Gopalakrishnan, Shyam, Rizvanovic, M., Wang, Z., Rahbek, Carsten, Marske, K. A. & Nogues, David Bravo, 2016, In: Science. 353, 6307, p. 1532-1535 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Analysis of independent cohorts of outbred CFW mice reveals novel loci for behavioral and physiological traits and identifies factors determining reproducibility
Zou, J., Gopalakrishnan, Shyam, Parker, C. C., Nicod, J., Mott, R., Cai, N., Lionikas, A., Davies, R. W., Palmer, A. A. & Flint, J., 2022, In: G3: Genes, Genomes, Genetics. 12, 1, 13 p., jkab394.Research output: Contribution to journal › Journal article › Research › peer-review
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Ancient DNA reveals genetic admixture in China during tiger evolution
Sun, X., Liu, Y. C., Tiunov, M. P., Gimranov, D. O., Zhuang, Y., Han, Y., Driscoll, C. A., Pang, Y., Li, C., Pan, Y., Velasco, M. S., Gopalakrishnan, S., Yang, R. Z., Li, B. G., Jin, K., Xu, X., Uphyrkina, O., Huang, Y., Wu, X. H., Gilbert, M. T. P. & 3 others, , 2023, In: Nature Ecology and Evolution. 7, 11, p. 1914-1929 29 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Ancient Maltese genomes and the genetic geography of Neolithic Europe
Ariano, B., Mattiangeli, V., Breslin, E. M., Parkinson, E. W., McLaughlin, T. R., Thompson, J. E., Power, R. K., Stock, J. T., Mercieca-Spiteri, B., Stoddart, S., Malone, C., Gopalakrishnan, Shyam, Cassidy, L. M. & Bradley, D. G., 2022, In: Current Biology. 32, 12, p. 2668-2680.e6Research output: Contribution to journal › Journal article › Research › peer-review
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Ancient and modern genomes unravel the evolutionary history of the rhinoceros family
Liu, S., Westbury, M. V., Dussex, N., Mitchell, K. J., Sinding, M. H. S., Heintzman, P. D., Duchêne, D. A., Kapp, J. D., von Seth, J., Heiniger, H., Sánchez-Barreiro, F., Margaryan, A., André-Olsen, R., De Cahsan, B., Meng, G., Yang, C., Chen, L., van der Valk, T., Moodley, Y., Rookmaaker, K. & 19 others, , 2021, In: Cell. 184, 19, p. 4874-4885.e16Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient genomes from Iceland reveal the making of a human population
Ebenesersdóttir, S. S., Sandoval Velasco, M., Gunnarsdóttir, E. D., Jagadeesan, A., Guðmundsdóttir, V. B., Thordardóttir, E. L., Einarsdóttir, M. S., Moore, K. H. S., Sigurðsson, Á., Magnusdóttir, D. N., Jonsson, H., Snorradóttir, S., Hovig, E., Møller, P., Kockum, I., Olsson, T., Alfredsson, L., Hansen, T. F., Werge, T., Cavalleri, G. L. & 10 others, , 2018, In: Science. 360, 6392, p. 1028-1032 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 140603020
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Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing
Research output: Contribution to journal › Journal article › Research › peer-review
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330
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Using DNA metabarcoding for simultaneous inference of common vampire bat diet and population structure
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
285
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The wolf reference genome sequence (Canis lupus lupus) and its implications for Canis spp. population genomics
Research output: Contribution to journal › Journal article › Research › peer-review
Published