Community-led, integrated, reproducible multi-omics with anvi'o

Research output: Contribution to journalEditorialResearchpeer-review

Standard

Community-led, integrated, reproducible multi-omics with anvi'o. / Eren, A. Murat; Kiefl, Evan; Shaiber, Alon; Veseli, Iva; Miller, Samuel E.; Schechter, Matthew S.; Fink, Isaac; Pan, Jessica N.; Yousef, Mahmoud; Fogarty, Emily C.; Trigodet, Florian; Watson, Andrea R.; Esen, Ozcan C.; Moore, Ryan M.; Clayssen, Quentin; Lee, Michael D.; Kivenson, Veronika; Graham, Elaina D.; Merrill, Bryan D.; Karkman, Antti; Blankenberg, Daniel; Eppley, John M.; Sjodin, Andreas; Scott, Jarrod J.; Vazquez-Campos, Xabier; McKay, Luke J.; McDaniel, Elizabeth A.; Stevens, Sarah L. R.; Anderson, Rika E.; Fuessel, Jessika; Fernandez-Guerra, Antonio; Maignien, Lois; Delmont, Tom O.; Willis, Amy D.

In: Nature Microbiology, Vol. 6, No. 1, 2021, p. 3-6.

Research output: Contribution to journalEditorialResearchpeer-review

Harvard

Eren, AM, Kiefl, E, Shaiber, A, Veseli, I, Miller, SE, Schechter, MS, Fink, I, Pan, JN, Yousef, M, Fogarty, EC, Trigodet, F, Watson, AR, Esen, OC, Moore, RM, Clayssen, Q, Lee, MD, Kivenson, V, Graham, ED, Merrill, BD, Karkman, A, Blankenberg, D, Eppley, JM, Sjodin, A, Scott, JJ, Vazquez-Campos, X, McKay, LJ, McDaniel, EA, Stevens, SLR, Anderson, RE, Fuessel, J, Fernandez-Guerra, A, Maignien, L, Delmont, TO & Willis, AD 2021, 'Community-led, integrated, reproducible multi-omics with anvi'o', Nature Microbiology, vol. 6, no. 1, pp. 3-6. https://doi.org/10.1038/s41564-020-00834-3

APA

Eren, A. M., Kiefl, E., Shaiber, A., Veseli, I., Miller, S. E., Schechter, M. S., Fink, I., Pan, J. N., Yousef, M., Fogarty, E. C., Trigodet, F., Watson, A. R., Esen, O. C., Moore, R. M., Clayssen, Q., Lee, M. D., Kivenson, V., Graham, E. D., Merrill, B. D., ... Willis, A. D. (2021). Community-led, integrated, reproducible multi-omics with anvi'o. Nature Microbiology, 6(1), 3-6. https://doi.org/10.1038/s41564-020-00834-3

Vancouver

Eren AM, Kiefl E, Shaiber A, Veseli I, Miller SE, Schechter MS et al. Community-led, integrated, reproducible multi-omics with anvi'o. Nature Microbiology. 2021;6(1):3-6. https://doi.org/10.1038/s41564-020-00834-3

Author

Eren, A. Murat ; Kiefl, Evan ; Shaiber, Alon ; Veseli, Iva ; Miller, Samuel E. ; Schechter, Matthew S. ; Fink, Isaac ; Pan, Jessica N. ; Yousef, Mahmoud ; Fogarty, Emily C. ; Trigodet, Florian ; Watson, Andrea R. ; Esen, Ozcan C. ; Moore, Ryan M. ; Clayssen, Quentin ; Lee, Michael D. ; Kivenson, Veronika ; Graham, Elaina D. ; Merrill, Bryan D. ; Karkman, Antti ; Blankenberg, Daniel ; Eppley, John M. ; Sjodin, Andreas ; Scott, Jarrod J. ; Vazquez-Campos, Xabier ; McKay, Luke J. ; McDaniel, Elizabeth A. ; Stevens, Sarah L. R. ; Anderson, Rika E. ; Fuessel, Jessika ; Fernandez-Guerra, Antonio ; Maignien, Lois ; Delmont, Tom O. ; Willis, Amy D. / Community-led, integrated, reproducible multi-omics with anvi'o. In: Nature Microbiology. 2021 ; Vol. 6, No. 1. pp. 3-6.

Bibtex

@article{de193b414a3240fd8b4b5933a152e091,
title = "Community-led, integrated, reproducible multi-omics with anvi'o",
abstract = "Big data abound in microbiology, but the workflows designed to enable researchers to interpret data can constrain the biological questions that can be asked. Five years after anvi'o was first published, this community-led multi-omics platform is maturing into an open software ecosystem that reduces constraints in 'omics data analyses.",
keywords = "MICROBIAL GENOMES",
author = "Eren, {A. Murat} and Evan Kiefl and Alon Shaiber and Iva Veseli and Miller, {Samuel E.} and Schechter, {Matthew S.} and Isaac Fink and Pan, {Jessica N.} and Mahmoud Yousef and Fogarty, {Emily C.} and Florian Trigodet and Watson, {Andrea R.} and Esen, {Ozcan C.} and Moore, {Ryan M.} and Quentin Clayssen and Lee, {Michael D.} and Veronika Kivenson and Graham, {Elaina D.} and Merrill, {Bryan D.} and Antti Karkman and Daniel Blankenberg and Eppley, {John M.} and Andreas Sjodin and Scott, {Jarrod J.} and Xabier Vazquez-Campos and McKay, {Luke J.} and McDaniel, {Elizabeth A.} and Stevens, {Sarah L. R.} and Anderson, {Rika E.} and Jessika Fuessel and Antonio Fernandez-Guerra and Lois Maignien and Delmont, {Tom O.} and Willis, {Amy D.}",
year = "2021",
doi = "10.1038/s41564-020-00834-3",
language = "English",
volume = "6",
pages = "3--6",
journal = "Nature Microbiology",
issn = "2058-5276",
publisher = "nature publishing group",
number = "1",

}

RIS

TY - JOUR

T1 - Community-led, integrated, reproducible multi-omics with anvi'o

AU - Eren, A. Murat

AU - Kiefl, Evan

AU - Shaiber, Alon

AU - Veseli, Iva

AU - Miller, Samuel E.

AU - Schechter, Matthew S.

AU - Fink, Isaac

AU - Pan, Jessica N.

AU - Yousef, Mahmoud

AU - Fogarty, Emily C.

AU - Trigodet, Florian

AU - Watson, Andrea R.

AU - Esen, Ozcan C.

AU - Moore, Ryan M.

AU - Clayssen, Quentin

AU - Lee, Michael D.

AU - Kivenson, Veronika

AU - Graham, Elaina D.

AU - Merrill, Bryan D.

AU - Karkman, Antti

AU - Blankenberg, Daniel

AU - Eppley, John M.

AU - Sjodin, Andreas

AU - Scott, Jarrod J.

AU - Vazquez-Campos, Xabier

AU - McKay, Luke J.

AU - McDaniel, Elizabeth A.

AU - Stevens, Sarah L. R.

AU - Anderson, Rika E.

AU - Fuessel, Jessika

AU - Fernandez-Guerra, Antonio

AU - Maignien, Lois

AU - Delmont, Tom O.

AU - Willis, Amy D.

PY - 2021

Y1 - 2021

N2 - Big data abound in microbiology, but the workflows designed to enable researchers to interpret data can constrain the biological questions that can be asked. Five years after anvi'o was first published, this community-led multi-omics platform is maturing into an open software ecosystem that reduces constraints in 'omics data analyses.

AB - Big data abound in microbiology, but the workflows designed to enable researchers to interpret data can constrain the biological questions that can be asked. Five years after anvi'o was first published, this community-led multi-omics platform is maturing into an open software ecosystem that reduces constraints in 'omics data analyses.

KW - MICROBIAL GENOMES

U2 - 10.1038/s41564-020-00834-3

DO - 10.1038/s41564-020-00834-3

M3 - Editorial

C2 - 33349678

VL - 6

SP - 3

EP - 6

JO - Nature Microbiology

JF - Nature Microbiology

SN - 2058-5276

IS - 1

ER -

ID: 256274216