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  1. 2022
  2. Published

    Initial Upper Paleolithic bone technology and personal ornaments at Bacho Kiro Cave (Bulgaria)

    Martisius, N. L., Spasov, R., Smith, G. M., Endarova, E., Sinet-Mathiot, V., Welker, Frido, Aldeias, V., Horta, P., Marreiros, J., Rezek, Z., McPherron, S. P., Sirakov, N., Sirakova, S., Tsanova, T. & Hublin, J., 2022, In: Journal of Human Evolution. 167, 34 p., 103198.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Fast and accurate estimation of multidimensional site frequency spectra from low-coverage high-throughput sequencing data

    Mas-Sandoval, A., Pope, N. S., Nielsen, Knud Nor, Altinkaya, Isin, Fumagalli, M. & Korneliussen, Thorfinn Sand, 2022, In: GigaScience. 11, 9 p., giac032.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    In situ recording of Mars soundscape

    Farley, K., Williford, K. & the SuperCam team, T. S. T., 2022, In: Nature. 605, 7911, p. 653-658 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Conservation strategies for the climate crisis: An update on three decades of biodiversity management recommendations from science

    McLaughlin, B. C., Skikne, S. A., Beller, E., Blakey, R. V., Olliff-Yang, R. L., Morueta-Holme, Naia, Heller, N. E., Brown, B. J. & Zavaleta, E. S., 2022, In: Biological Conservation. 268, 12 p., 109497.

    Research output: Contribution to journal › Review › Research › peer-review

  6. Published

    A global indicator of utilized wildlife populations: Regional trends and the impact of management

    McRae, L., Freeman, R., Geldmann, Jonas, Moss, G. B., Kjær-Hansen, L. & Burgess, Neil David, 2022, In: One Earth. 5, 4, p. 422-433 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Using virtual reality for anatomical landmark annotation in geometric morphometrics

    Messer, D., Atchapero, M., Jensen, M. B., Svendsen, M. S., Galatius, A., Olsen, Morten Tange, Frisvad, J. R., Dahl, V. A., Conradsen, K., Dahl, A. B. & Bærentzen, A., 2022, In: PeerJ. 10, 23 p., e12869.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Accurate and Effective Detection of Recurrent Copy Number Variants in Large SNP Genotype Datasets

    Montalbano, S., Sánchez, X. C., Vaez, M., Helenius, D., Werge, Thomas & Ingason, A., 2022, In: Current Protocols. 2, 12, 21 p., e621.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Chemical evolution of ytterbium in the Galactic disk

    Montelius, M., Forsberg, R., Ryde, N., Jönsson, H., Afsar, M., Johansen, Anders, Kaplan, K. F., Kim, H., Mace, G., Sneden, C. & Thorsbro, B., 2022, In: Astronomy & Astrophysics. 665, 11 p., A135.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Environmental niche and flight intensity are associated with molecular evolutionary rates in a large avian radiation

    Montoya, P., Cadena, C. D., Claramunt, S. & Duchene, David, Dec 2022, In: BMC Ecology and Evolution. 22, 10 p., 95.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Renewal of planktonic foraminifera diversity after the Cretaceous Paleogene mass extinction by benthic colonizers

    Morard, R., Hassenrück, C., Greco, M., Fernandez Guerra, Antonio, Rigaud, S., Douady, C. J. & Kucera, M., 2022, In: Nature Communications. 13, 9 p., 7135.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    The value of biotic pollination and dense forest for fruit set of Arabica coffee: A global assessment

    Moreaux, C., Meireles, D. A. L., Sonne, Jesper, Badano, E. I., Classen, A., González-Chaves, A., Hipólito, J., Klein, A. M., Maruyama, P. K., Metzger, J. P., Philpott, S. M., Rahbek, Carsten, Saturni, F. T., Sritongchuay, T., Tscharntke, T., Uno, S., Vergara, C. H., Viana, B. F., Strange, Niels & Dalsgaard, Bo, 2022, In: Agriculture, Ecosystems and Environment. 323, 12 p., 107680.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    FrAnTK: a Frequency-based Analysis ToolKit for efficient exploration of allele sharing patterns in present-day and ancient genomic datasets

    Moreno Mayar, J. Víctor, 2022, In: G3: Genes, Genomes, Genetics. 12, 1, 6 p., jkab357.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Demographic variation in space and time: implications for conservation targeting

    Morrison, C. A., Butler, S. J., Clark, J. A., Arizaga, J., Baltà, O., Cepák, J., Nebot, A. L., Piha, M., Thorup, Kasper, Wenninger, T., Robinson, R. A. & Gill, J. A., 2022, In: Royal Society Open Science. 9, 3, 211671.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Revisiting the Chimborazo Volcano — Cradle of Plant Geography

    Morueta-Holme, Naia, 2022, Alexander von Humboldt: Multiperspective Approaches. Falk, G. C., Strecker, M. R. & Schneider, S. (eds.). Springer, p. 99-113

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  16. Published

    The Solar System calcium isotopic composition inferred from Ryugu samples

    Moynier, F., Dai, W., Yokoyama, T., Hu, Y., Paquet, M., Abe, Y., Aleon, J., Alexander, C. M. OD., Amari, S., Amelin, Y., Bajo, K-I., Bizzarro, M., Bouvier, A., Carlson, R. W., Chaussidon, M., Choi, B-G., Dauphas, N., Davis, A. M., Di Rocco, T., Fujiya, W. & 74 others, Fukai, R., Gautam, I., Haba, M. K., Hibiya, Y., Hidaka, H., Homma, H., Hoppe, P., Huss, G. R., Ichida, K., Iizuka, T., Ireland, T. R., Ishikawa, A., Ito, M., Itoh, S., Kawasaki, N., Kita, N. T., Kitajima, K., Kleine, T., Komatani, S., Krot, A. N., Liu, M., Masuda, Y., McKeegan, K. D., Morita, M., Motomura, K., Nakai, I., Nagashima, K., Nesvorny, D., Nguyen, A., Nittler, L., Onose, M., Pack, A., Park, C., Piani, L., Qin, L., Russell, S. S., Sakamoto, N., Schönbächler, M., Tafla, L., Tang, H., Terada, K., Terada, Y., Usui, T., Wada, S., Wadhwa, M., Walker, R. J., Yamashita, K., Yin, Q., Yoneda, S., Young, E. D., Yui, H., Zhang, A., Nakamura, T., Naraoka, H., Noguchi, T., Okazaki, R., Sakamoto, K., Yabuta, H., Abe, M., Miyazaki, A., Nakato, A., Nishimura, M., Okada, T., Yada, T., Yogata, K., Nakazawa, S., Saiki, T., Tanaka, S., Terui, F., Tsuda, Y., Watanabe, S., Yoshikawa, M., Tachibana, S. & Yurimoto, H., 2022, In: Geochemical Perspectives Letters. 24, p. 1-6 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Modeling the spatiotemporal spread of beneficial alleles using ancient genomes

    Muktupavela, Rasa Audange, Petr, Martin, Ségurel, L., Korneliussen, Thorfinn Sand, Novembre, J. & Racimo, Fernando, 2022, In: eLife. 11, 33 p., e73767.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Complete Genome Sequence of Dickeya chrysanthemi Bacteriophage DchS19

    Mutusamy, P., Jothi, S. J., Kumarasan, Yukgehnaish, Loke, S., Lee, S. Y., Rajandas, Heera & Parimannan, Sivachandran, 2022, In: Microbiology resource announcements. 11, 10, 2 p., e00800-22.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Extreme freeze-tolerance in cryophilic tardigrades relies on controlled ice formation but does not involve significant change in transcription: [Corrigendum]

    Møbjerg, A., Kodama, M., Ramos Madrigal, Jazmin, Neves, R. C., Jørgensen, Aslak, Schiøtt, M., Gilbert, M Thomas P & Møbjerg, Nadja, 2022, In: Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology. 271, 8 p., 111245.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Potential for invasion of traded birds under climate and land-cover change

    Naimi, B., Capinha, C., Ribeiro, J., Rahbek, Carsten, Strubbe, D., Reino, L. & Araújo, M. B., 2022, In: Global Change Biology. 28, 19, p. 5654-5666 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Diversity, Dynamics and Therapeutic Application of Clostridioides difficile Bacteriophages

    Nale, J. Y., Thanki, A. M., Rashid, S. J., Shan, J., Vinner, G. K., Dowah, A. S. A., Cheng, J. K. J., Sicheritz-Pontén, Thomas & Clokie, M. R. J., 2022, In: Viruses. 14, 12, 21 p., 2772.

    Research output: Contribution to journal › Review › Research › peer-review

  22. Published

    Differential expression profiling of heat stressed tardigrades reveals major shift in the transcriptome

    Neves, R. C., Møbjerg, A., Kodama, M., Ramos Madrigal, Jazmin, Gilbert, M Thomas P & Møbjerg, Nadja, 2022, In: Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology. 267, 7 p., 111169.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Safety, regulatory and environmental issues related to breeding and international trade of edible insects in Africa

    Niassy, S., Omuse, E. R., Roos, Nanna, Halloran, A., Eilenberg, Jørgen, Egonyu, J. P., Tanga, C., Meutchieye, F., Mwangi, R., Subramanian, S., Musundire, R., Nkunika, P. O. Y., Anankware, J. P., Kinyuru, J., Yusuf, A. & Ekesi, S., 2022, In: O I E Revue Scientifique et Technique. 41, 1, p. 117-131 15 p.

    Research output: Contribution to journal › Review › Research › peer-review

  24. Published

    Complete mitochondrial genomes from museum specimens clarify millipede evolution in the Eastern Arc Mountains

    Nielsen, M., Margaryan, Ashot, Nielsen, Tejs Lind, Enghoff, Henrik & Allentoft, Morten Erik, 2022, In: Zoological Journal of the Linnean Society. 196, 2, p. 924-939 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Modern population genetics and race

    Nielsen, Rasmus, 2022, Remapping Race in a Global Context. Lorusso, L. & Winther, R. G. (eds.). Routledge, p. 157-163 7 p. (History and Philosophy of Biology).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  26. Published

    The Phylogenetic Position of the Enigmatic, Polypodium hydriforme (Cnidaria, Polypodiozoa): Insights from Mitochondrial Genomes

    Novosolov, Maria, Yahalomi, D., Chang, E. S., Fiala, I., Cartwright, P. & Huchon, D., 2022, In: Genome Biology and Evolution. 14, 8, 9 p., evac112.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Molecular signatures written in bone proteins of 79 AD victims from Herculaneum and Pompeii: [incl. correction]

    Ntasi, G., Rodriguez Palomo, I., Marino, G., Piaz, F. D., Sirano, F., Cappellini, Enrico, Birolo, L. & Petrone, P., 2022, In: Scientific Reports. 12, 1, 15 p., 8401.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Potential Hybridization of Fasciola hepatica and F. gigantica in Africa — A Scoping Review

    Nukeri, S., Malatji, M. P., Sengupta, Mita Eva, Vennervald, Birgitte J, Stensgaard, Anna-Sofie, Chaisi, M. & Mukaratirwa, S., 2022, In: Pathogens. 11, 11, 25 p., 1303.

    Research output: Contribution to journal › Review › Research › peer-review

  29. Published

    Gut microbiota differences between paired intestinal wall and digesta samples in three small species of fish

    Jessen, Lasse Nyholm, Larrañaga, Iñaki Odriozola, Martin Bideguren, Garazi, Aizpurua Arrieta, Ostaizka & Alberdi, Antton, 2022, In: PeerJ. 10, 22 p., e12992.

    Research output: Contribution to journal › Journal article › Research › peer-review

  30. Published

    Sarcoptic mange changes bacterial and fungal microbiota of bare-nosed wombats (Vombatus ursinus)

    Næsborg-Nielsen, C., Eisenhofer Philipona, Raphael A, Fraser, T. A., Wilkinson, V., Burridge, C. P. & Carver, S., 2022, In: Parasites & Vectors. 15, 10 p., 323.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    (2874–2877) Proposals to conserve the names Typhula with a conserved type, Macrotyphula against Sclerotium, and Phyllotopsidaceae against Sclerotiaceae, and to reject the name Sclerotium fulvum (Basidiomycota: Agaricales): Agaricales)

    Olariaga, I., Huhtinen, S., Læssøe, Thomas, Petersen, J. H., Hansen, K. & Parra, L. A., 2022, In: Taxon. 71, 2, p. 468-470 3 p.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  32. Published

    Influence of African Swine Fever Virus on Host Gene Transcription within Peripheral Blood Mononuclear Cells from Infected Pigs

    Olesen, A. S., Kodama, M., Skovgaard, K., Møbjerg, A., Lohse, L., Limborg, Morten Tønsberg, Bøtner, A. & Belsham, Graham John, 2022, In: Viruses. 14, 10, 2147.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Altered Maturation of the Skin Microbiome in Infants with Atopic Dermatitis

    Olesen, C. M., Clausen, M. L., Agner, Tove, Asplund, M., Rasmussen, Linett, Yüksel, Y. T., Andersen, P. S., Litman, Thomas, Hansen, Anders Johannes & Barnes, Christopher James, 2022, In: Acta Dermato-Venereologica. 102, 7 p., adv00817.

    Research output: Contribution to journal › Journal article › Research › peer-review

  34. Published

    Genetic and behavioural data confirm the existence of a distinct harbour porpoise ecotype in West Greenland

    Olsen, Morten Tange, Nielsen, N. H., Biard, V., Teilmann, J., Ngô, M. C., Víkingsson, G., Gunnlaugsson, T., Stenson, G., Lawson, J., Lah, L., Tiedemann, R. & Heide-Jørgensen, M. P., 2022, In: Ecological Genetics and Genomics. 22, 9 p., 100108.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Biogeography in the deep: Hierarchical population genomic structure of two beaked whale species

    Onoufriou, A. B., Gaggiotti, O. E., Aguilar de Soto, N., McCarthy, M. L., Morin, P. A., Rosso, M., Dalebout, M., Davison, N., Baird, R. W., Baker, C. S., Berrow, S., Brownlow, A., Burns, D., Caurant, F., Claridge, D., Constantine, R., Demaret, F., Dreyer, S., Ðuras, M., Durban, J. W. & 21 others, Frantzis, A., Freitas, L., Genty, G., Galov, A., Hansen, S. S., Kitchener, A. C., Martin, V., Mignucci-Giannoni, A. A., Montano, V., Moulins, A., Olavarría, C., Poole, M. M., Reyes Suárez, C., Rogan, E., Ryan, C., Schiavi, A., Tepsich, P., Urban R., J., West, K., Olsen, Morten Tange & Carroll, E. L., 2022, In: Global Ecology and Conservation. 40, 18 p., e02308.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    PaleoProPhyler: a reproducible pipeline for phylogenetic inference using ancient proteins

    Patramanis, Ioannis, Ramos Madrigal, Jazmin, Cappellini, Enrico & Racimo, Fernando, 2022, bioRxiv, 6 p.

    Research output: Working paper › Preprint › Research

  37. Published

    Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic

    Patrono, L. V., Vrancken, B., Budt, M., Düx, A., Lequime, S., Boral, S., Gilbert, M. T. P., Gogarten, J. F., Hoffmann, L., Horst, D., Merkel, K., Morens, D., Prepoint, B., Schlotterbeck, J., Schuenemann, V. J., Suchard, M. A., Taubenberger, J. K., Tenkhoff, L., Urban, C., Widulin, N. & 6 others, Winter, E., Worobey, M., Schnalke, T., Wolff, T., Lemey, P. & Calvignac-Spencer, S., 2022, In: Nature Communications. 13, 9 p., 2314.

    Research output: Contribution to journal › Journal article › Research › peer-review

  38. Published

    Ancient Human Genomes and Environmental DNA from the Cement Attaching 2,000-Year-Old Head Lice Nits

    Pedersen, Mikkel Winther, Antunes, C., Westbury, Binia De Cahsan, Moreno Mayar, J. Víctor, Sikora, Martin, Vinner, Lasse, Mann, D., Klimov, P. B., Black, S., Michieli, C. T., Braig, H. R. & Perotti, M. A., 2022, In: Molecular Biology and Evolution. 39, 2, 16 p., msab351.

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Et holistisk syn på organismen og dens mikroorganismer

    Pedersen, T. S., Noer, Christina & Limborg, Morten Tønsberg, 2022, In: Aktuel Naturvidenskab. 2022, 3, p. 14-18

    Research output: Contribution to journal › Journal article › Communication

  40. Published

    Arbuscular mycorrhizal fungal communities of pristine rainforests and adjacent sugarcane fields recruit from different species pools

    Pereira, C. M. R., López-García, Á., Maia, L. C., Frøslev, Tobias Guldberg, Kjøller, Rasmus & Rosendahl, Søren, 2022, In: Soil Biology and Biochemistry. 167, 9 p., 108585.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Reply to Peng et al. Chicken tessellation requires more pieces

    Peters, J., Fuller, D. Q., Irving-Pease, Evan, Lebrasseur, O., Best, J., Smallman, R. & Larson, G., 2022, In: PNAS. 119, 44, 2 p., e2213678119.

    Research output: Contribution to journal › Letter › Research › peer-review

  42. Published

    The biocultural origins and dispersal of domestic chickens

    Peters, J., Lebrasseur, O., Irving-Pease, Evan, Paxinos, P. D., Best, J., Smallman, R., Callou, C., Gardeisen, A., Trixl, S., Frantz, L., Sykes, N., Fuller, D. Q. & Larson, G., 2022, In: PNAS. 119, 24, 9 p., e2121978119.

    Research output: Contribution to journal › Journal article › Research › peer-review

  43. Published

    Forfattere bag central skovrapport: Her er vores anbefalinger om urørt skov

    Petersen, Anders Højgård, Lundhede, Thomas, Heilmann-Clausen, Jacob, Thorsen, Bo Jellesmark, Strange, Niels & Rahbek, Carsten, 8 Mar 2022, Altinget.dk.

    Research output: Other contribution › Net publication - Internet publication › Communication

  44. Published

    ENM2020: A FREE ONLINE COURSE AND SET OF RESOURCES ON MODELING SPECIES NICHES AND DISTRIBUTIONS

    Peterson, A. T., Aiello-Lammens, M. E., Amatulli, G., Anderson, R. P., Cobos, M. E., Diniz-Filho, J. A. F., Escobar, L. E., Feng, X., Franklin, J., Gadelha, L. M. R., Georges, D., Guéguen, M., Gueta, T., Ingenloff, K., Jarvie, S., Jimenez, L., Karger, D. N., Kass, J. M., Kearney, M. R., Loyola, R. & 24 others, Machado-Stredel, F., Martinez-Meyer, E., Merow, C., Mondelli, M. L., Mortara, S. R., Muscarella, R., Myers, C. E., Naimi, B., Noesgaard, D., Ondo, I., Osorio-Olvera, L., Owens, Hannah Lois, Pearson, R., Pinilla-Buitrago, G. E., Sánchez-Tapia, A., Saupe, E. E., Thuiller, W., Varela, S., Warren, D. L., Wieczorek, J., Yates, K., Zhu, G., Zuquim, G. & Zurell, D., 2022, In: Biodiversity Informatics. 17, p. 1-9 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    slendr: a framework for spatio-temporal population genomic simulations on geographic landscapes

    Petr, Martin, Haller, B. C., Ralph, P. L. & Racimo, Fernando, 2022, bioRxiv, 27 p.

    Research output: Working paper › Preprint › Research

  46. Published

    Odd palynomorphs (NPPs) from annuli of fern sporangia: Holocene lacustrine and tsunami deposits of the Danish Wadden Sea

    Piasecki, Stefan, 2022, In: Palynology. 46, 3, p. 1-8 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Danish Fungi 2020 - Not Just Another Image Recognition Dataset

    Picek, L., Sulc, M., Matas, J., Jeppesen, T. S., Heilmann-Clausen, Jacob, Læssøe, Thomas & Frøslev, Tobias Guldberg, 2022, Proceedings - 2022 IEEE Winter Conference on Applications of Computer Vision, WACV 2022. O'Conner, L. (ed.). IEEE, p. 3281-3291 11 p.

    Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

  48. Published

    Automatic Fungi Recognition: Deep Learning Meets Mycology

    Picek, L., Šulc, M., Matas, J., Heilmann-Clausen, Jacob, Jeppesen, T. S. & Lind, E., 2022, In: Sensors. 22, 2, 22 p., 633.

    Research output: Contribution to journal › Journal article › Research › peer-review

  49. Published

    Overview of FungiCLEF 2022: Fungi Recognition as an Open Set Classification Problem

    Picek, L., Šulc, M., Matas, J. & Heilmann-Clausen, Jacob, 2022, In: CEUR Workshop Proceedings. 3180, p. 1970-1981 12 p.

    Research output: Contribution to journal › Conference article › Research › peer-review

  50. Published

    Process-explicit models reveal the structure and dynamics of biodiversity patterns

    Pilowsky, Julia Aaron, Colwell, R. K., Rahbek, Carsten & Fordham, D. A., 2022, In: Science Advances. 8, 31, 12 p., eabj2271.

    Research output: Contribution to journal › Review › Research › peer-review

  51. Published

    Range and extinction dynamics of the steppe bison in Siberia: A pattern-oriented modelling approach

    Pilowsky, Julia Aaron, Haythorne, S., Brown, S. C., Krapp, M., Armstrong, E., Brook, B. W., Rahbek, Carsten & Fordham, D. A., 2022, In: Global Ecology and Biogeography. 31, 12, p. 2483-2497 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

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