Globe Institute

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  1. Published

    The avocado genome informs deep angiosperm phylogeny, highlights introgressive hybridization, and reveals pathogen-influenced gene space adaptation

    Rendón-Anaya, M., Ibarra-Laclette, E., Méndez-Bravo, A., Lan, T., Zheng, C., Carretero-Paulet, L., Perez-Torres, C. A., Chacón-López, A., Hernandez-Guzmán, G., Chang, T. H., Farr, K. M., Brad Barbazuk, W., Chamala, S., Mutwil, M., Shivhare, D., Alvarez-Ponce, D., Mitter, N., Hayward, A., Fletcher, S., Rozas, J. & 9 others, Gracia, A. S., Kuhn, D., Barrientos-Priego, A. F., Salojärvi, J., Librado, P., Sankoff, D., Herrera-Estrella, A., Albert, V. A. & Herrera-Estrella, L., 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 34, p. 17081-17089 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  2. Published

    Authentication and assessment of contamination in ancient DNA

    Renaud, Gabriel, Schubert, Mikkel, Sawyer, S. & Orlando, L., 2019, Ancient DNA: Methods and Protocols. Shapiro, B., Barlow, A., Heintzman, P. D., Hofreiter, M., Paijmans, J. L. A. & Soares, A. E. R. (eds.). 2. ed. ed. Humana Press, p. 163-194 32 p. (Methods in Molecular Biology, Vol. 1963).

    Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  3. Published

    Joint Estimates of Heterozygosity and Runs of Homozygosity for Modern and Ancient Samples

    Renaud, Gabriel, Hanghøj, Kristian Ebbesen, Korneliussen, Thorfinn Sand, Willerslev, Eske & Orlando, L., 2019, In: Genetics (Print). 212, 3, p. 587-614 28 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Secondary metabolite biosynthetic diversity in Arctic Ocean metagenomes

    Rego, A., Fernandez Guerra, Antonio, Duarte, P., Assmy, P., Leão, P. N. & Magalhães, C., 2021, In: Microbial genomics. 7, 12, 14 p., 000731.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Identifying loci under positive selection in complex population histories

    Refoyo Martínez, Alba, Rodrigues da Fonseca, Rute Andreia, Halldórsdóttir, K., Árnason, E., Mailund, T. & Racimo, Fernando, 2019, In: Genome Research. 29, 9, p. 1506-1520

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    How robust are cross-population signatures of polygenic adaptation in humans?

    Refoyo Martínez, Alba, Liu, S., Jørgensen, A. M., Jin, X., Albrechtsen, Anders, Martin, A. R. & Racimo, Fernando, 2021, In: Peer Community Journal. 1, 54 p., e22.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    The formation of the Indo-Pacific montane avifauna

    Reeve, A. H., Kennedy, J. D., Pujolar, J. M., Petersen, Bent, Blom, M. P. K., Alström, P., Haryoko, T., Ericson, P. G. P., Irestedt, M., Nylander, J. A. A. & Jønsson, Knud Andreas, 2023, In: Nature Communications. 14, 15 p., 8215.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Influences of Ingredients and Bakers on the Bacteria and Fungi in Sourdough Starters and Bread

    Reese, A. T., Madden, A. A., Joossens, M., Lacaze, G. & Dunn, Rob, 2020, In: mSphere. 5, 1, p. 1-15 e00950-19.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    De novo innovation allows shark parasitism and global expansion of the barnacle Anelasma squalicola

    Rees, D. J., Noever, C., Finucci, B., Schnabel, K., Leslie, R. E., Drewery, J., Bergum, H. O. T., Dutilloy, A. & Glenner, Henrik, 2019, In: Current Biology. 29, 12, p. R562-R563

    Research output: Contribution to journal › Editorial › Research › peer-review

  10. Published

    The extent and distribution of joint conservation-development funding in the tropics

    Reed, J., Oldekop, J., Barlow, J., Carmenta, R., Geldmann, Jonas, Ickowitz, A., Narulita, S., Rahman, S. A., van Vianen, J., Yanou, M. & Sunderland, T., 2020, In: One Earth. 3, 6, p. 753-762 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Population-level plant pollination mode is influenced by Quaternary climate and pollinators

    Rech, A. R., Ollerton, J., Dalsgaard, Bo, Jorge, L. R., Sandel, B., Svenning, J., Baronio, G. J. & Sazima, M., 2021, In: Biotropica. 53, 2, p. 632-642

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Considering adaptive genetic variation in climate change vulnerability assessment reduces species range loss projections

    Razgour, O., Forester, B., Taggart, J. B., Bekaert, M., Juste, J., Ibáñez, C., Puechmaille, S. J., Novella-Fernandez, R., Alberdi, Antton & Manel, S., 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 21, p. 10418-10423 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Diversity gradients of terrestrial vertebrates – substantial variations about a common theme

    Raz, T., Allison, A., Avila, L. J., Bauer, A. M., Böhm, M., Caetano, G. H. D. O., Colli, G., Doan, T. M., Doughty, P., Grismer, L., Itescu, Y., Kraus, F., Martins, M., Morando, M., Murali, G., Nagy, Z. T., Nogueira, C. D. C., Novosolov, M., Oliver, P. M., Passos, P. & 9 others, Pincheira-Donoso, D., Sindaco, R., Slavenko, A., Torres-Carvajal, O., Uetz, P., Wagner, P., Zimin, A., Roll, U. & Meiri, S., 2024, In: Journal of Zoology. 322, 2, p. 126-140 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Glacial Rock Flour: its Characteristics and Enhanced Weathering Potential

    Ray Sarkar, Sneha, 2023, GLOBE Institute, Faculty of Health and Medical Sciences, University of Copenhagen. 179 p.

    Research output: Book/Report › Ph.D. thesis

  15. Published

    High Arctic ecosystem states: Conceptual models of vegetation change to guide long-term monitoring and research

    Ravolainen, V., Soininen, E. M., Jonsdottir, I. S., Eischeid, I., Forchhammer, M., van der Wal, R. & Pedersen, A. O., 2020, In: Ambio. 49, 3, p. 666-677

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    The influence of natural fire and cultural practices on island ecosystems: Insights from a 4,800 year record from Gran Canaria, Canary Islands

    Ravazzi, C., Mariani, M., Criado, C., Garozzo, L., Naranjo-Cigala, A., Perez-Torrado, F. J., Pini, R., Rodriguez-Gonzalez, A., Nogué, S., Whittaker, R. J., Fernández-Palacios, J. M. & de Nascimento, L., 2021, In: Journal of Biogeography. 48, 2, p. 276-290

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Estimation of site frequency spectra from low-coverage sequencing data using stochastic EM reduces overfitting, runtime, and memory usage

    Rasmussen, Malthe Sebro, Garcia Erill, Genís, Korneliussen, Thorfinn Sand, Wiuf, Carsten & Albrechtsen, Anders, 2022, In: Genetics. 222, 4, 15 p., iyac148.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Assessing the genetic composition of cotton-top tamarins (Saguinus oedipus) before sweeping anthropogenic impact

    Rasmussen, Linett, Fontsere, Claudia, Soto-Calderón, I. D., Guillen, R., Savage, A., Hansen, Anders Johannes, Hvilsom, C. & Gilbert, M Thomas P, 2023, In: Molecular Ecology. 32, 20, p. 5514-5527 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Increased Bacterial Richness Associated With Lesions Within the Porites spp. of Vietnam

    Rasmussen, Linett, Barnes, Christopher James, Mak, Sarah Siu Tze, Kjartansdóttir, K. R., Hansen, T. A., Doan-Nhu, H., Nguyen-Ngoc, L., Frøslev, Tobias Guldberg, Hellström, M. & Hansen, Anders Johannes, 27 May 2020, In: Frontiers in Ecology and Evolution. 8, 151.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Genome-resolving metagenomics reveals wild western capercaillies (Tetrao urogallus) as avian hosts for antibiotic-resistance bacteria and their interactions with the gut-virome community

    Rasmussen, Jacob Agerbo & Chua, P. Y. S., 2023, In: Microbiological Research. 271, 11 p., 127372.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Integrative analyses of probiotics, pathogenic infections and host immune response highlight the importance of gut microbiota in understanding disease recovery in rainbow trout (Oncorhynchus mykiss)

    Rasmussen, Jacob Agerbo, Villumsen, Kasper Rømer, Jørgensen, Louise von Gersdorff, Forberg, T., Zuo, S., Kania, Per, Buchmann, Kurt, Kristiansen, Karsten, Bojesen, Anders Miki & Limborg, Morten Tønsberg, 2022, In: Journal of Applied Microbiology. 132, 4, p. 3201-3216 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    How salmon hooked me: Host-microbe interactions in aquaculture

    Rasmussen, Jacob Agerbo, 2022, Department of Biology, Faculty of Science, University of Copenhagen. 111 p.

    Research output: Book/Report › Ph.D. thesis

  23. Published

    eDNA‐based biomonitoring at an experimental German vineyard to characterize how management regimes shape ecosystem diversity

    Rasmussen, Jacob Agerbo, Nielsen, M., Mak, Sarah Siu Tze, Döring, J., Klincke, F., Gopalakrishnan, Shyam, Dunn, Rob, Kauer, R. & Gilbert, M Thomas P, 2021, In: Environmental DNA. 3, 1, p. 70-82 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    A multi-omics approach unravels metagenomic and metabolic alterations of a probiotic and synbiotic additive in rainbow trout (Oncorhynchus mykiss)

    Rasmussen, Jacob Agerbo, Villumsen, Kasper Rømer, Ernst, M., Hansen, M., Forberg, T., Gopalakrishnan, Shyam, Gilbert, M Thomas P, Bojesen, Anders Miki, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2022, In: Microbiome. 10, 19 p., 21.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts

    Rasmussen, Jacob Agerbo, Villumsen, Kasper Rømer, Duchene, David, Puetz, Lara Christine, Delmont, T. O., Sveier, H., Jørgensen, Louise von Gersdorff, Præbel, K., Martin, M. D., Bojesen, Anders Miki, Gilbert, M Thomas P, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2021, In: Communications Biology. 4, 10 p., 579.

    Research output: Contribution to journal › Journal article › Research › peer-review

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