Globe Institute

  1. 2019
  2. Published

    A global model of island species-area relationships

    Matthews, T. J., Rigal, F., Triantis, K. A. & Whittaker, R. J., 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 25, p. 12337-12342

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    A guide to the application of Hill numbers to DNA-based diversity analyses

    Alberdi, Antton & Gilbert, M Thomas P, 2019, In: Molecular Ecology Resources. 19, 4, p. 804-817 14 p.

    Research output: Contribution to journalReviewResearchpeer-review

  4. Published

    A landscape-scale assessment of tropical mammals reveals the effects of habitat and anthropogenic disturbance on community occupancy

    Cavada, N., Havmøller, Rasmus Worsøe, Scharff, Nikolaj & Rovero, F., 2019, In: PLOS ONE. 14, 4, p. 1-15 15 p., e0215682.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    A late Middle Pleistocene Denisovan mandible from the Tibetan Plateau

    Chen, F., Welker, Frido, Shen, C., Bailey, S. E., Bergmann, I., Davis, S., Xia, H., Wang, H., Fischer, R., Freidline, S. E., Yu, T., Skinner, M. M., Stelzer, S., Dong, G., Fu, Q., Dong, G., Wang, J., Zhang, D. & Hublin, J., 2019, In: Nature. 569, p. 409-412

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    A reconstruction of warm-water inflow to Upernavik Isstrøm since 1925 CE and its relation to glacier retreat

    Vermassen, F., Andreasen, N., Wangner, D. J., Thibault, Nicolas Rudolph, Seidenkrantz, M. S., Jackson, R., Schmidt, S., Kjær, Kurt H. & Andresen, C. S., 2019, In: Climate of the Past. 15, 3, p. 1171-1186 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    A simplified DNA extraction protocol for unsorted bulk arthropod samples that maintains exoskeletal integrity

    Nielsen, M., Gilbert, M Thomas P, Pape, Thomas & Bohmann, Kristine, 2019, In: Environmental DNA. 1, 2, p. 144-154

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    A systematic survey of regional multi-taxon biodiversity: evaluating strategies and coverage

    Brunbjerg, A. K., Bruun, Hans Henrik, Brøndum, L., Classen, A. T., Dalby, L., Fog, K., Frøslev, Tobias Guldberg, Goldberg, Irina, Hansen, Anders Johannes, Hansen, M. D. D., Høye, T. T., Illum, Anders Alexander, Læssøe, Thomas, Newman, G. S., Skipper, L., Søchting, Ulrik & Ejrnæs, R., 2019, In: BMC Ecology. 19, 15 p., 43.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    A western route of prehistoric human migration from Africa into the Iberian Peninsula

    González-Fortes, G., Tassi, F., Trucchi, E., Henneberger, K., Paijmans, J. L. A., Díez-del-Molino, D., Schroeder, H., Susca, R. R., Barroso-Ruiz, C., Bermudez, F. J., Barroso-Medina, C., Bettencourt, A. M. S., Sampaio, H. A., Grandal-d'Anglade, A., Salas, A., de Lombera-Hermida, A., Fabregas Valcarce, R., Vaquero, M., Alonso, S., Lozano, M. & 5 others, Rodriguez-Alvarez, X. P., Fernandez-Rodriguez, C., Manica, A., Hofreiter, M. & Barbujani, G., 2019, In: Proceedings of the Royal Society B: Biological Sciences. 286, 1895, 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Aardwolf population diversity and phylogenetic positioning inferred using complete mitochondrial genomes

    Westbury, Michael Vincent, Westbury, Binia De Cahsan, Dalerum, F., Noren, K. & Hofreiter, M., 2019, In: African Journal of Wildlife Research. 49, 1, p. 27-33 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Abundance drives broad patterns of generalisation in plant–hummingbird pollination networks

    Simmons, B. I., Vizentin-Bugoni, J., Maruyama, P. K., Cotton, P. A., Marín-Gómez, O. H., Lara, C., Rosero-Lasprilla, L., Maglianesi, M. A., Ortiz-Pulido, R., Rocca, M. A., Rodrigues, L. C., Tinoco, B. A., Vasconcelos, M. F., Sazima, M., Martín González, A. M., Sonne, Jesper, Rahbek, Carsten, Dicks, L. V., Dalsgaard, Bo & Sutherland, W. J., 2019, In: Oikos. 128, 9, p. 1287-1295

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Adaptive radiation and the evolution of nectarivory in a large songbird clade

    Marki, P. Z., Kennedy, J. D., Cooney, C. R., Rahbek, Carsten & Fjeldså, Jon, 2019, In: Evolution. 73, 6, p. 1226-1240

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Advancing impact assessments of non-native species: strategies for strengthening the evidence-base

    Strubbe, D., White, R., Edelaar, P., Rahbek, Carsten & Shwartz, A., 2019, In: NeoBiota. 51, p. 41-64

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Alteration trends and geochemical source region characteristics preserved in the fluviolacustrine sedimentary record of Gale crater, Mars

    Bedford, C. C., Bridges, J. C., Schwenzer, S. P., Wiens, R. C., Rampe, E. B., Frydenvang, Jens & Gasda, P. J., 2019, In: Geochimica et Cosmochimica Acta. 246, p. 234-266 33 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Amphibian functional diversity is related to high annual precipitation and low precipitation seasonality in the New World

    Ochoa-Ochoa, L. M., Mejia-Dominguez, N. R., Velasco, J. A., Marske, K. A. & Rahbek, Carsten, 2019, In: Global Ecology and Biogeography. 28, 9, p. 1219-1229 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    An Ancient Genome from the Indus Valley Civilization

    Raghavan, M., Schroeder, Hannes & Malaspinas, A., 2019, In: Cell. 179, 3, p. 586-588

    Research output: Contribution to journalEditorialResearchpeer-review

  17. Published

    An imprint of astronomical climate forcing in the Baltoscandian Middle Ordovician ‘orthoceratite limestone’?

    Rasmussen, Christian Mac Ørum, Sinnesael, M., Thibault, Nicolas Rudolph, Stouge, Svend, Siggaard-Andersen, Marie-Louise & Schovsbo, N., 2019, In: Geophysical Research Abstracts. 21, 14038, 1 p.

    Research output: Contribution to journalConference abstract in journalResearch

  18. Published

    An introduction to the edible, poisonous and medicinal fungi of northern Laos

    Læssøe, Thomas, Pedersen, O. S. & Sysouphanthong, P., 2019, Privately published - printed in Bangkok. 192 p.

    Research output: Book/ReportBookCommunication

  19. Published

    Analysis of faecal substrates sheds light into coprostanol origin, preservation and diagenesis

    Sistiaga Gutierrez, Maria Ainara, Poyet, M., Groussin, M., Collins, Matthew James & Summons, R. E., 2019, 29th International Meeting on Organic Geochemistry. European Association of Geoscientists and Engineers, p. 1-2 (Conference Proceedings, Vol. 2019).

    Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearchpeer-review

  20. Published

    Ancestry-specific association mapping in admixed populations

    Skotte, L., Jørsboe, E., Korneliussen, Thorfinn Sand, Moltke, Ida & Albrechtsen, Anders, 2019, In: Genetic Epidemiology. 43, 5, p. 506-521

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Ancient DNA analysis of a nineteenth century tobacco pipe from a Maryland slave quarter

    Schablitsky, J. M., Witt, K. E., Ramos Madrigal, Jazmin, Ellegaard, M. R., Malhi, R. S. & Schroeder, Hannes, 2019, In: Journal of Archaeological Science. 105, p. 11-18 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Ancient DNA shows high faunal diversity in the Lesser Caucasus during the Late Pleistocene

    Antonosyan, M., Seersholm, Frederik Valeur, Grealy, A. C., Barham, M., Werndly, D., Margaryan, Ashot, Cieślik, A., Stafford, T. W., Allentoft, Morten Erik, Bunce, M. & Yepiskoposyan, L., 2019, In: Quaternary Science Reviews. 219, p. 102-111 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Ancient RNA from Late Pleistocene permafrost and historical canids shows tissue-specific transcriptome survival

    Smith, O., Dunshea, G., Sinding, M. S., Fedorov, S., Germonpre, M., Bocherens, H. & Gilbert, M Thomas P, 2019, In: PLOS Biology. 17, 7, p. 1-28 e3000166.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Ancient amino acids from fossil feathers in amber

    McCoy, V. E., Gabbott, S. E., Penkman, K., Collins, Matthew James, Presslee, S., Holt, J., Grossman, H., Wang, B., Kraemer, M. M. S., Delclòs, X. & Peñalver, E., 2019, In: Scientific Reports. 9, 8 p., 6420.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Ancient pigs reveal a near-complete genomic turnover following their introduction to Europe

    Frantz, L. A. F., Haile, J., Lin, A. T., Scheu, A., Geoerg, C., Benecke, N., Alexander, M., Linderholm, A., Mullin, V. E., Daly, K. G., Battista, V. M., Price, M., Gron, K. J., Alexandri, P., Arbogast, R-M., Arbuckle, B., Balasescu, A., Barnett, R., Bartosiewicz, L., Baryshnikov, G. & 80 others, Bonsall, C., Boric, D., Boroneant, A., Bulatovic, J., Cakirlar, C., Carretero, J., Chapman, J., Church, M., Crooijmans, R., De Cupere, B., Detry, C., Dimitrijevic, V., Dumitrascu, V., du Plessis, L., Edwards, C. J., Erek, C. M., Erim-Ozdogan, A., Ervynck, A., Fulgione, D., Gligor, M., Gotherstrom, A., Gourichon, L., Groenen, M. A. M., Helmer, D., Hongo, H., Horwitz, L. K., Irving-Pease, E. K., Lebrasseur, O., Lesur, J., Malone, C., Manaseryan, N., Marciniak, A., Martlew, H., Mashkour, M., Matthews, R., Matuzeviciute, G. M., Maziar, S., Meijaard, E., McGovern, T., Megens, H., Miller, R., Mohaseb, A. F., Orschiedt, J., Orton, D., Papathanasiou, A., Pearson, M. P., Pinhasi, R., Radmanovic, D., Ricaut, F., Richards, M., Sabin, R., Sarti, L., Schier, W., Sheikhi, S., Stephan, E., Stewart, J. R., Stoddart, S., Tagliacozzo, A., Tasic, N., Trantalidou, K., Tresset, A., Valdiosera, C., van den Hurk, Y., Van Poucke, S., Vigne, J., Yanevich, A., Zeeb-Lanz, A., Triantafyllidis, A., Gilbert, M Thomas P, Schibler, J., Rowley-Conwy, P., Zeder, M., Peters, J., Cucchi, T., Bradley, D. G., Dobney, K., Burger, J., Evin, A., Girdland-Flink, L. & Larson, G., 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 35, p. 17231-17238

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Annual GPS tracking reveals unexpected wintering area in a long-distance migratory songbird

    Pedersen, L., Thorup, Kasper & Tøttrup, Anders P., 2019, In: Journal of Ornithology. 160, 1, p. 265-270

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Annulomagnus triseptatus: – en ferskvandskernesvamp

    Læssøe, Thomas, 2019, In: Svampe. 80, p. 42-44

    Research output: Contribution to journalJournal articleResearch

  28. Published

    Ant communities: Biogeography, Conservation & Citizen Science

    Sheard, Julie Koch, 2019, Department of Biology, Faculty of Science, University of Copenhagen.

    Research output: Book/ReportPh.D. thesisResearch

  29. Published

    Approaching sheep herds origins and the emergence of the wool economy in continental Europe during the Bronze Age

    Sabatini, S., Bergerbrant, S., Brandt, Luise Ørsted, Margaryan, Ashot & Allentoft, Morten Erik, 2019, In: Archaeological and Anthropological Sciences. 11, 9, p. 4909-4925 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Archaeological Wool Textiles: A Window into Ancient Sheep Genetics?

    Brandt, Luise Ørsted & Allentoft, Morten Erik, 2019, The Textile Revolution in Bronze Age Europe: Production, Specialisation, Consumption. Sabatini, S. & Bergerbrant, S. (eds.). Cambridge University Press, p. 274-303 Twelve

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  31. Published

    Archaeological wool textiles – a window to ancient sheep genetics?

    Brandt, Luise Ørsted & Allentoft, Morten Erik, 2019, The Textile Revolution in Bronze Age Europe. Cambridge University Press, p. 274-303

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  32. Published

    Assessing predicted isolation effects from the general dynamic model of island biogeography with an eco-evolutionary model for plants

    Cabral, J. S., Whittaker, R. J., Wiegand, K. & Kreft, H., 2019, In: Journal of Biogeography. 46, 7, p. 1569-1581

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    Atmosphere-ocean oxygen and productivity dynamics during early animal radiations

    Dahl, Tais Wittchen, Connelly, James, Li, D., Kouchinsky, A., Gill, B. C., Porter, S., Maloof, A. C. & Bizzarro, Martin, 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 39, p. 19352-19361 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    Authentication and assessment of contamination in ancient DNA

    Renaud, Gabriel, Schubert, Mikkel, Sawyer, S. & Orlando, L., 2019, Ancient DNA: Methods and Protocols. Shapiro, B., Barlow, A., Heintzman, P. D., Hofreiter, M., Paijmans, J. L. A. & Soares, A. E. R. (eds.). 2. ed. ed. Humana Press, p. 163-194 32 p. (Methods in Molecular Biology, Vol. 1963).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  35. Published

    Avian Binocularity and Adaptation to Nocturnal Environments: Genomic Insights from a Highly Derived Visual Phenotype

    Borges, R., Fonseca, J., Gomes, C., Johnson, W. E., O'Brien, S. J., KU, thw266, Gilbert, M Thomas P, Jarvis, E. D. & Antunes, A., 2019, In: Genome Biology and Evolution. 11, 8, p. 2244-2255

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    Bayesian conditional autoregressive models to assess spatial patterns of diarrhoea risk among children under the age of 5 years in Mbour, Senegal

    Thiam, S., Cisse, G., Stensgaard, Anna-Sofie, Niang-Diene, A., Utzinger, J. & Vounatsou, P., 2019, In: Geospatial Health. 14, 2, p. 321-328

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. Published
  38. Published

    Biodiversity seen through the perspective of insects: 10 simple rules on methodological choices and experimental design for genomic studies

    Matos-Maraví, P., Ritter, C. D., Barnes, Christopher James, Nielsen, M., Olsson, U., Wahlberg, N., Marquina, D., Sääksjärvi, I. & Antonelli, A., 2019, In: PeerJ. 7, 31 p., e6727.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    Biological adaptations in the Arctic cervid, the reindeer (Rangifer tarandus)

    Lin, Z., Chen, L., Chen, X., Zhong, Y., Yang, Y., Xia, W., Liu, C., Zhu, W., Wang, H., Yan, B., Yang, Y., Liu, X., Kvie, K. S., Røed, K. H., Wang, K., Xiao, W., Wei, H., Li, G., Heller, R., Gilbert, M. T. P. & 3 others, Qiu, Q., Wang, W. & Li, Z., 2019, In: Science. 364, 6446, p. 1154-+ 7 p., eaav6312.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Bone Diagenesis: The effect of depositional environments on bone degradation

    Eriksen, A. M. H., 2019, Natural History Museum of Denmark, Faculty of Science, University of Copenhagen.

    Research output: Book/ReportPh.D. thesisResearch

  41. Published

    Bone diagenesis in a Mycenaean secondary burial (Kastrouli, Greece)

    Kontopoulos, I., Penkman, K., Liritzis, I. & Collins, Matthew James, 2019, In: Archaeological and Anthropological Sciences. 11, 10, p. 5213-5230

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Brief oxygenation events in locally anoxic oceans during the Cambrian solves the animal breathing paradox

    Dahl, Tais Wittchen, Siggaard-Andersen, Marie-Louise, Schovsbo, E. H., Persson, Daniel Pergament, Husted, Søren, Hougård, Iben Winther, Dickson, A. J., Kjær, Kurt H. & Nielsen, Arne Thorshøj, 2019, In: Scientific Reports. 9, 9 p., 11669.

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    Bucking the trend: The diversity of Anthropocene 'winners' among British moths

    Boyes, D. H., Fox, R., Shortall, C. R. & Whittaker, R. J., 2019, In: Frontiers of Biogeography. 11, 3, p. 1-15 15 p., 3862.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    Building mountain biodiversity: geological and evolutionary processes

    Rahbek, Carsten, Borregaard, Michael Krabbe, Antonelli, A., K. Colwell, R., Holt, B. G., Nogues, David Bravo, Rasmussen, Christian Mac Ørum, Richardson, Katherine, Rosing, Minik Thorleif, Whittaker, R. J. & Fjeldså, Jon, 2019, In: Science. 365, 6458, p. 1114-1119 6 p.

    Research output: Contribution to journalReviewResearchpeer-review

  45. Published

    Can additive beta diversity be reliably partitioned into nestedness and turnover components?

    Matthews, T. J., Aspin, T. W. H., Ulrich, W., Baselga, A., Kubota, Y., Proios, K., Triantis, K. A., Whittaker, R. J. & Strona, G., 2019, In: Global Ecology and Biogeography. 28, 8, p. 1146-1154

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Childhood experience in forest recreation practices: evidence from nine European countries

    Taye, F. A., Abildtrup, J., Mayer, M., Ščasný, M., Strange, Niels & Lundhede, Thomas, 2019, In: Urban Forestry and Urban Greening. 46, 9 p., 126471.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Citizen Science in Schools: Students Collect Valuable Mammal Data for Science, Conservation, and Community Engagement

    Schuttler, S. G., Sears, R. S., Orendain, I., Khot, R., Rubenstein, D., Rubenstein, N., Dunn, Rob, Baird, E., Kandros, K., O'Brien, T. & Kays, R., 2019, In: BioScience. 69, 1, p. 69-79

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Classifying grey seal behaviour in relation to environmental variability and commercial fishing activity - a multivariate hidden Markov model

    van Beest, F. M., Mews, S., Elkenkamp, S., Schuhmann, P., Tsolak, D., Wobbe, T., Bartolino, V., Bastardie, F., Dietz, R., von Dorrien, C., Galatius, A., Karlsson, O., McConnell, B., Nabe-Nielsen, J., Olsen, Morten Tange, Teilmann, J. & Langrock, R., 2019, In: Scientific Reports. 9, p. 1-14 5642.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Climate change and pastoralists: perceptions and adaptation in montane Kenya

    Cuni-Sanchez, A., Omeny, P., Pfeifer, M., Olaka, L., Mamo, M. B., Marchant, R. & Burgess, Neil David, 2019, In: Climate and Development. 11, 6, p. 513-524

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    Climate shapes mammal community trophic structures and humans simplify them

    Mendoza, M. & Araujo, M. B., 2019, In: Nature Communications. 10, 9 p., 5197.

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    Climate tipping points - too risky to bet against

    Lenton, T. M., Rockström, J., Gaffney, O., Rahmstorf, S., Richardson, Katherine, Steffen, W. & Schellnhuber, H. J., 2019, In: Nature. 575, p. 592-595 3 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. Published

    Combining ZooMS and zooarchaeology to study Late Pleistocene hominin behaviour at Fumane (Italy)

    Sinet-Mathiot, V., Smith, G. M., Romandini, M., Wilcke, A., Peresani, M., Hublin, J. & Welker, Frido, 2019, In: Scientific Reports. 9, 13 p., 12350.

    Research output: Contribution to journalJournal articleResearchpeer-review

  53. Published

    Comparative analyses identify genomic features potentially involved in the evolution of birds-of-paradise

    Prost, S., Armstrong, E. E., Nylander, J., Thomas, G. W. C., Suh, A., Petersen, Bent, Dalen, L., Benz, B. W., Blom, M. P. K., Palkopoulou, E., Ericson, P. G. P. & Irestedt, M., 2019, In: GigaScience. 8, 5, 12 p., giz003.

    Research output: Contribution to journalJournal articleResearchpeer-review

  54. Published

    Complete Inactivation of Sebum-Producing Genes Parallels the Loss of Sebaceous Glands in Cetacea

    Lopes-Marques, M., Machado, A. M., Alves, L. Q., Fonseca, M. M., Barbosa, S., Sinding, M. S., Rasmussen, M. H., Iversen, M. R., Bertelsen, Mads Frost, Campos, P. F., Rodrigues da Fonseca, Rute Andreia, Ruivo, R. & Castro, L. F. C., 2019, In: MOLECULAR BIOLOGY AND EVOLUTION . 36, 6, p. 1270-1280

    Research output: Contribution to journalJournal articleResearchpeer-review

  55. Published

    Consequences of breed formation on patterns of genomic diversity and differentiation: the case of highly diverse peripheral Iberian cattle

    Rodrigues da Fonseca, Rute Andreia, Urena, I., Afonso, S., Pires, A. E., Jørsboe, E., Chikhi, L. & Ginja, C., 2019, In: BMC Genomics. 20, p. 1-13 334.

    Research output: Contribution to journalJournal articleResearchpeer-review

  56. Published

    Considering adaptive genetic variation in climate change vulnerability assessment reduces species range loss projections

    Razgour, O., Forester, B., Taggart, J. B., Bekaert, M., Juste, J., Ibáñez, C., Puechmaille, S. J., Novella-Fernandez, R., Alberdi, Antton & Manel, S., 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 21, p. 10418-10423 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  57. Published

    Contaminating viral sequences in high-throughput sequencing viromics: a linkage study of 700 sequencing libraries

    Asplund, M., Kjartansdóttir, K. R., Mollerup, S., Vinner, L., Fridholm, H., Herrera, J. A. R., Friis-Nielsen, J., Hansen, T. A., Jensen, R. H., Nielsen, I. B., Richter, S. R., Rey-Iglesia, A., Matey-Hernandez, M. L., Alquezar-Planas, D. E., Olsen, P. V. S., Sicheritz-Pontén, T., Willerslev, E., Lund, O., Brunak, S., Mourier, T. & 3 others, Nielsen, L. P., Izarzugaza, J. M. G. & Hansen, Anders Johannes, 2019, In: Clinical Microbiology and Infection. 25, 10, p. 1277-1285

    Research output: Contribution to journalJournal articleResearchpeer-review

  58. Published

    Contemporary climatic analogs for 540 North American urban areas in the late 21st century

    Fitzpatrick, M. C. & Dunn, Rob, 2019, In: Nature Communications. 10, 7 p., 614.

    Research output: Contribution to journalJournal articleResearchpeer-review

  59. Published

    Contrasting dates of rainforest fragmentation in Africa inferred from trees with different dispersal abilities

    Pineiro, R., Hardy, O. J., Tovar, C., Gopalakrishnan, Shyam, Vieira, Filipe Garrett & Gilbert, M Thomas P, 2019, 19 p. (bioRxiv).

    Research output: Working paperPreprintResearch

  60. Published

    Cradles of diversity are unlikely relics of regional climate stability

    Fordham, D. A., Brown, S. C., Wigley, T. M. L. & Rahbek, Carsten, 2019, In: Current Biology. 29, 10, p. R356-R357

    Research output: Contribution to journalLetterResearchpeer-review

  61. Published

    Cryptic diversity of small-sized species of Phalacroma (Dinophysales, Dinophyceae) from Denmark Strait (Eastern Arctic Greenland)

    Daugbjerg, Niels, Hansen, S. A. & Richardson, Katherine, 2019, In: Phycological Research. 67, 3, p. 244-249

    Research output: Contribution to journalJournal articleResearchpeer-review

  62. Published

    DNA analysis: Analysing ancient DNA from Archaeologcal textiles aDNA methodology and results - Challenges of aDNA from Archaeological textiles.

    Brandt, Luise Ørsted, 2019, Hammerum – Burial Customs and Clothing in the Roman Iron Age. Møbjerg, T. (ed.). Aarhus Universitetsforlag, p. 143-146

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  63. Published

    DNA metabarcoding - need for robust experimental designs to draw sound ecological conclusions

    Zinger, L., Bonin, A., Alsos, I. G., Bálint, M., Bik, H., Boyer, F., Chariton, A. A., Creer, S., Coissac, E., Deagle, B. E., De Barba, M., Dickie, I. A., Dumbrell, A. J., Ficetola, G. F., Fierer, N., Fumagalli, L., Gilbert, M. T. P., Jarman, S., Jumpponen, A., Kauserud, H. & 7 others, Orlando, L., Pansu, J., Pawlowski, J., Tedersoo, L., Thomsen, P. F., Willerslev, Eske & Taberlet, P., 2019, In: Molecular Ecology. 28, 8, p. 1857-1862 6 p.

    Research output: Contribution to journalEditorialResearchpeer-review

  64. Published

    Daddellædersvamp (Porostereum spadiceum) genfundet (genindvandret?).

    Mikkelsen, J. & Læssøe, Thomas, 2019, In: Svampe. 79, p. 48-49

    Research output: Contribution to journalJournal articleResearch

  65. Published

    DamMet: ancient methylome mapping accounting for errors, true variants, and post-mortem DNA damage

    Hanghøj, Kristian Ebbesen, Renaud, Gabriel, Albrechtsen, Anders & Orlando, L., 2019, In: GigaScience. 8, 4, 6 p., giz025.

    Research output: Contribution to journalJournal articleResearchpeer-review

  66. Published

    Danmarks Svampeatlas 2009-2013

    Heilmann-Clausen, Jacob, Læssøe, Thomas, Frøslev, Tobias Guldberg & Petersen, J. H., 2019, Svampetryk. 350 p.

    Research output: Book/ReportBookCommunication

  67. Published

    Danmarks Svampeatlas – 2018-sæsonen

    Heilmann-Clausen, Jacob, Frøslev, Tobias Guldberg, Læssøe, Thomas, Jeppesen, T. S., Petersen, J. H. & Søchting, Ulrik, 2019, In: Svampe. 79, p. 52-55

    Research output: Contribution to journalJournal articleCommunication

  68. Published

    De livsvigtige mikroalger

    Richardson, Katherine, 2019, Vild med Viden. Fokusserie 2: Tang. Forlaget Epsilon, (Vild med viden - Fokus; No. 12).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterCommunication

  69. Published

    Demographic reconstruction from ancient DNA supports rapid extinction of the great auk

    Thomas, J. E., Carvalho, G. R., Haile, J., Rawlence, N. J., Martin, M. D., Ho, S. Y. W., Sigfusson, A. P., Josefsson, V. A., Frederiksen, M., Linnebjerg, J. F., Castruita, J. A. S., Niemann, J., Sinding, M-H. S., Sandoval-Velasco, M., Soares, A. E. R., Lacy, R., Barilaro, C., Best, J., Brandis, D., Cavallo, C. & 17 others, Elorza, M., Garrett, K. L., Groot, M., Johansson, F., Lifjeld, J. T., Nilson, G., Serjeanston, D., Sweet, P., Fuller, E., Hufthammer, A. K., Meldgaard, Morten, Fjeldså, Jon, Shapiro, B., Hofreiter, M., Stewart, J. R., Gilbert, M Thomas P & Knapp, M., 2019, In: eLife. 8, 35 p., e47509.

    Research output: Contribution to journalJournal articleResearchpeer-review

  70. Published

    Dental pulp exposure, periapical inflammation and suppurative osteomyelitis of the jaws in juvenile Baltic grey seals (Halichoerus grypus grypus) from the late 19th century

    Kierdorf, U., Olsen, Morten Tange, Kahle, P., Ludolphy, C. & Kierdorf, H., 2019, In: PLOS ONE. 14, 4, p. 1-26 e0215401.

    Research output: Contribution to journalJournal articleResearchpeer-review

  71. Published

    Desert crossing strategies of migrant songbirds vary between and within species

    Jiguet, F., Burgess, M., Thorup, K., Conway, G., Matos, J. L. A., Barber, L., Black, J., Burton, N., Castelló, J., Clewley, G., Copete, J. L., Czajkowski, M. A., Dale, S., Davis, T., Dombrovski, V., Drew, M., Elts, J., Gilson, V., Grzegorczyk, E., Henderson, I. & 23 others, Holdsworth, M., Husbands, R., Lorrilliere, R., Marja, R., Minkevicius, S., Moussy, C., Olsson, P., Onrubia, A., Pérez, M., Piacentini, J., Piha, M., Pons, J., Procházka, P., Rakovic, M., Robins, H., Seimola, T., Selstam, G., Skierczynski, M., Sondell, J., Thibault, J., Tøttrup, Anders P., Walker, J. & Hewson, C., 2019, In: Scientific Reports. 9, 12 p., 20248.

    Research output: Contribution to journalJournal articleResearchpeer-review

  72. Published

    Diabetic cats have decreased gut microbial diversity and a lack of butyrate producing bacteria

    Kieler, Ida Nordang, Osto, M., Hugentobler, L., Puetz, Lara Christine, Gilbert, M Thomas P, Hansen, Torben, Pedersen, Oluf Borbye, Reusch, C. E., Zini, E., Lutz, T. A. & Bjørnvad, Charlotte Reinhard, 2019, In: Scientific Reports. 9, p. 1-13 13 p., 4822.

    Research output: Contribution to journalJournal articleResearchpeer-review

  73. Published

    Diet of seals in the Baltic Sea region: a synthesis of published and new data from 1968 to 2013

    Scharff-Olsen, Camilla Hjorth, Galatius, A., Teilmann, J., Dietz, R., Andersen, S. M., Jarnit, S., Kroner, A., Botnen, A. B., Lundström, K., Møller, Peter Rask & Olsen, Morten Tange, 2019, In: I C E S Journal of Marine Science. 76, 1, p. 284-297 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  74. Published

    Disappearance of Icelandic Walruses Coincided with Norse Settlement

    Keighley (Weber), Xenia, Palsson, S., Einarsson, B. F., Petersen, A., Fernandez-Coll, M., Jordan, P., Olsen, Morten Tange & Malmquist, H. J., 2019, In: MOLECULAR BIOLOGY AND EVOLUTION . 36, 12, p. 2656-2667

    Research output: Contribution to journalJournal articleResearchpeer-review

  75. Published

    Dissolved Inorganic Geogenic Phosphorus Load to a Groundwater-Fed Lake: Implications of Terrestrial Phosphorus Cycling by Groundwater

    Nisbeth, C. S., Kidmose, J., Weckstrom, K., Reitzel, K., Odgaard, B. V., Bennike, O., Thorling, L., McGowan, S., Schomacker, A., Kristensen, D. L. J. & Jessen, Søren, 2019, In: Water. 11, 11, 23 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  76. Published

    Dunet Huesvamp (Mycena corynephora) endelig fundet i Danmark

    Læssøe, Thomas, 2019, In: Svampe. 80, p. 41-44

    Research output: Contribution to journalJournal articleResearch

  77. Published

    Dynamics in the global protected-area estate since 2004

    Lewis, E., MacSharry, B., Juffe-Bignoli, D., Harris, N., Burrows, G., Kingston, N. & Burgess, Neil David, 2019, In: Conservation Biology. 33, 3, p. 570-579

    Research output: Contribution to journalJournal articleResearchpeer-review

  78. Published

    EPAS1 Gain-of-Function Mutation Contributes to High-Altitude Adaptation in Tibetan Horses

    Liu, X., Zhang, Y., Li, Y., Pan, J., Wang, D., Chen, W., Zheng, Z., He, X., Zhao, Q., Pu, Y., Guan, W., Han, J., Orlando, L., Ma, Y. & Jiang, L., 2019, In: Molecular Biology and Evolution. 36, 11, p. 2591-2603

    Research output: Contribution to journalJournal articleResearchpeer-review

  79. Published

    Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny

    Cappellini, E., Welker, F., Pandolfi, L., Ramos-Madrigal, J., Samodova, D., Rüther, P. L., Fotakis, A. K., Lyon, D., Moreno-Mayar, J. V., Bukhsianidze, M., Rakownikow Jersie-Christensen, R., Mackie, M., Ginolhac, A., Ferring, R., Tappen, M., Palkopoulou, E., Dickinson, M. R., Stafford, T. W., Chan, Y. L., Götherström, A. & 23 others, Nathan, S. K. S. S., Heintzman, P. D., Kapp, J. D., Kirillova, I., Moodley, Y., Agusti, J., Kahlke, R. D., Kiladze, G., Martínez-Navarro, B., Liu, Shanlin, Sandoval-Velasco, Marcela, Sinding, Mikkel Holger Strander, Kelstrup, C. D., Allentoft, Morten Erik, Orlando, L., Penkman, K., Shapiro, B., Rook, L., Dalén, L., Gilbert, M Thomas P, Olsen, Jesper Velgaard, Lordkipanidze, D. & Willerslev, Eske, 2019, In: Nature. 574, 7776, p. 103-107

    Research output: Contribution to journalJournal articleResearchpeer-review

  80. Published

    Ecography's flip to a pay-to-publish model

    Araujo, M. B., Svenning, J. & Tuomisto, H., 2019, In: Ecography. 42, 8, p. 1456-1457

    Research output: Contribution to journalEditorialResearchpeer-review

  81. Published

    Ecological networks: Pursuing the shortest path, however narrow and crooked

    Costa, A., Martin Gonzalez, A. M., Guizien, K., Doglioli, A. M., Gómez, J. M., Petrenko, A. A. & Allesina, S., 2019, In: Scientific Reports. 9, 13 p., 17826.

    Research output: Contribution to journalJournal articleResearchpeer-review

  82. Published

    Editorial: Ecological Non-equilibrium in the Anthropocene

    Rapacciuolo, G., Rominger, A. J., Morueta-Holme, Naia & Blois, J. L., 2019, In: Frontiers in Ecology and Evolution. 7, 3 p., 428.

    Research output: Contribution to journalEditorialResearchpeer-review

  83. Published

    Editorial: Research and Management of Eutrophication in Coastal Systems

    Andersen, J. H., Carstensen, J., Holmer, M., Krause-Jensen, D. & Richardson, Katherine, 2019, In: Frontiers in Marine Science. 6, 5 p., 768.

    Research output: Contribution to journalEditorialResearchpeer-review

  84. Published

    Emergence and Spread of Basal Lineages of Yersinia pestis during the Neolithic Decline

    Rascovan, N., Sjogren, K., Kristiansen, K., Nielsen, Rasmus, Willerslev, Eske, Desnues, C. & Rasmussen, Simon, 2019, In: Cell. 176, 1-2, p. 295-305.e10

    Research output: Contribution to journalJournal articleResearchpeer-review

  85. Published

    Enamel proteome sequences from Dmanisi (Georgia) enable molecular phylogeny beyond the limits of ancient DNA preservation

    Cappellini, Enrico, Welker, Frido, Olsen, Jesper Velgaard, Lordkipanidze, D. & Willerslev, Eske, 2019, In: American Journal of Physical Anthropology. 168, suppl. 68, p. 35 1 p.

    Research output: Contribution to journalConference abstract in journalResearch

  86. Published

    Enamel proteome shows that Gigantopithecus was an early diverging pongine

    Welker, Frido, Ramos Madrigal, Jazmin, Kuhlwilm, M., Liao, W., Gutenbrunner, P., de Manuel, M., Samodova, D., Mackie, Meaghan, Allentoft, Morten Erik, Bacon, A., Collins, Matthew James, Cox, J., Lalueza-Fox, C., Olsen, Jesper Velgaard, Demeter, Fabrice, Wang, W., Marques-Bonet, T. & Cappellini, Enrico, 2019, In: Nature. 576, p. 262-265

    Research output: Contribution to journalJournal articleResearchpeer-review

  87. Published

    Eneolithic subsistence economy in Central Italy: first dietary reconstructions through stable isotopes

    De Angelis, F., Scorrano, Gabriele, Martinez-Labarga, C., Giustini, F., Brilli, M., Pacciani, E., Silvestrini, M., Calattini, M., Volante, N., Martini, F., Sarti, L. & Rickards, O., 2019, In: Archaeological and Anthropological Sciences. 11, 8, p. 4171-4186

    Research output: Contribution to journalJournal articleResearchpeer-review

  88. Published

    Environmental DNA for improved detection and environmental surveillance of schistosomiasis

    Sengupta, Mita Eva, Hellstrom, M., Kariuki, H. C., Olsen, A., Thomsen, P. F., Mejer, Helena, Willerslev, Eske, Mwanje, M. T., Madsen, Henry, Kristensen, T. K., Stensgaard, Anna-Sofie & Vennervald, Birgitte J, 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 18, p. 8931-8940

    Research output: Contribution to journalJournal articleResearchpeer-review

  89. Published

    Evolution of female promiscuity in Passerides songbirds

    Lifjeld, J. T., Gohli, J., Albrecht, T., Garcia-del-Rey, E., Johannessen, L. E., Kleven, O., Marki, P. Z., Omotoriogun, T. C., Rowe, M. & Johnsen, A., 2019, In: BMC Evolutionary Biology. 19, 14 p., 169.

    Research output: Contribution to journalJournal articleResearchpeer-review

  90. Published

    Evolutionary history and palaeoecology of brown bear in North-East Siberia re-examined using ancient DNA and stable isotopes from skeletal remains

    Rey de la Iglesia, Alba, García-Vázquez, A., Treadaway, E. C., van der Plicht, J., Baryshnikov, G. F., Szpak, P., Bocherens, H., Boeskorov, G. G. & Lorenzen, Eline, 2019, In: Scientific Reports. 9, 1, 12 p., 4462.

    Research output: Contribution to journalJournal articleResearchpeer-review

  91. Published

    Exceptionally high delta N-15 values in collagen single amino acids confirm Neandertals as high-trophic level carnivores

    Jaouen, K., Richards, M. P., Le Cabec, A., Welker, Frido, Rendu, W., Hublin, J., Soressi, M. & Talamo, S., 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 11, p. 4928-4933

    Research output: Contribution to journalJournal articleResearchpeer-review

  92. Published

    Expansion of sustainability science needed for the SDGs

    Messerli, P., Kim, E. M., Lutz, W., Moatti, J., Richardson, Katherine, Saidam, M., Smith, D., Eloundou-Enyegue, P., Foli, E., Glassman, A., Licona, G. H., Murniningtyas, E., Staniškis, J. K., Ypersele, J. V. & Furman, E., 2019, In: Nature Sustainability. 2, p. 892–894 3 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  93. Published

    Experience and survival in migratory European Robins Erithacus rubecula and Song Thrushes Turdus philomelos negotiating the Baltic Sea

    Snell, K. R. S. & Thorup, Kasper, 2019, In: Bird Study. 66, 1, p. 83-91

    Research output: Contribution to journalJournal articleResearchpeer-review

  94. Published

    Experimental evidence of the long-term effects of reindeer on Arctic vegetation greenness and species richness at a larger landscape scale

    Sundqvist, M. K., Moen, J., Björk, R. G., Vowles, T., Kytöviita, M., Parsons, M. A. & Olofsson, J., 2019, In: Journal of Ecology. 107, 6, p. 2724-2736

    Research output: Contribution to journalJournal articleResearchpeer-review

  95. Published

    Factors determining species richness patterns of breeding birds along an elevational gradient in the Horn of Africa region

    Abebe, A. F., Cai, T., Wale, M., Song, G., Fjeldså, Jon & Lei, F., 2019, In: Ecology and Evolution. 9, 17, p. 9609-9623 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  96. Published

    False-negative detections from environmental DNA collected in the presence of large numbers of killer whales (Orcinus orca)

    Pinfield, R., Dillane, E., Runge, Anne Kathrine Wiborg, Evans, A., Mirimin, L., Niemann, Jonas, Reed, T. E., Reid, D. G., Rogan, E., Samarra, F. I. P., Sigsgaard, E. E. & Foote, A. D., 2019, In: Environmental DNA. 1, 4, p. 316-328 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  97. Published

    Faster speciation of fig-wasps than their host figs leads to decoupled speciation dynamics: snapshots across the speciation continuum

    Souto-Vilaros, D., Machac, Antonin, Michalek, J., Darwell, C. T., Sisol, M., Kuyaiva, T., Isua, B., Weiblen, G. D., Novotny, V. & Segar, S. T., 2019, In: Molecular Ecology. 28, 17, p. 3958-3976

    Research output: Contribution to journalJournal articleResearchpeer-review

  98. Published

    Feasting on wild boar in the Early Neolithic. Evidence from an 11,400 year old placed deposit at Tappeh Asiab, central Zagros

    Bangsgaard, Pernille, Yeomans, Lisa, Darabi, H., Gregersen, K., Olsen, J., Richter, Tobias & Mortensen, P., 2019, In: Cambridge Archaeological Journal. 29, 3, p. 443-463 21 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  99. Published

    Fences can support restoration in human-dominated ecosystems when rewilding with large predators

    Bull, J. W., Ejrnæs, R., Macdonald, D. W., Svenning, J. & Sandom, C. J., 2019, In: Restoration Ecology. 27, 1, p. 198-209 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  100. Published

    First pre-modern record of the gyrfalcon (Falco rusticolus) in north-east Greenland

    Moseley, G. E., Rosvold, J., Gotfredsen, Anne Birgitte, Hajdas, I., Gilg, O., Gregersen, K. M., Spoetl, C. & Edwards, R. L., 2019, In: Polar Research. 38, p. 1-10

    Research output: Contribution to journalJournal articleResearchpeer-review

  101. Published

    Fjord sediments in Greenland: A climate archive at the intersection between the ocean and the ice sheet

    Wangner, D. J., 2019, Natural History Museum of Denmark, Faculty of Science, University of Copenhagen.

    Research output: Book/ReportPh.D. thesisResearch