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  1. 2023
  2. Published

    VIRify: An integrated detection, annotation and taxonomic classification pipeline using virus-specific protein profile hidden Markov models

    Rangel Piñeros, Guillermo Andres, Almeida, A., Beracochea, M., Sakharova, E., Marz, M., Muñoz, A. R., Hölzer, M. & Finn, R. D., 2023, In: PLOS Computational Biology. 19, 8, 28 p., e1011422.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Vegetation structure from LiDAR explains the local richness of birds across Denmark

    Davison, Charles W., Assmann, J. J., Normand, S., Rahbek, Carsten & Morueta-Holme, Naia, 2023, In: Journal of Animal Ecology. 92, 7, p. 1332-1344

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Vertebrate environmental DNA from leaf swabs

    Lynggaard, Christina Islas, Calvignac-Spencer, S., Chapman, C. A., Kalbitzer, U., Leendertz, F. H., Omeja, P. A., Opito, E. A., Sarkar, D., Bohmann, Kristine & Gogarten, J. F., 2023, In: Current Biology. 33, 16, p. R853-R854

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  5. Published

    Was the Late Ordovician mass extinction truly exceptional?

    Rasmussen, Christian Mac Ørum, Vandenbroucke, T. R. A., Nogues, David Bravo & Finnegan, S., 2023, In: Trends in Ecology and Evolution. 38, 9, p. 812-821 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Water circulation in Ryugu asteroid affected the distribution of nucleosynthetic isotope anomalies in returned sample

    Yokoyama, T., Wadhwa, M., Iizuka, T., Rai, V., Gautam, I., Hibiya, Y., Masuda, Y., Haba, M. K., Fukai, R., Hines, R., Phelan, N., Abe, Y., Aléon, J., Alexander, C. M. OD., Amari, S., Amelin, Y., Bajo, K., Bizzarro, M., Bouvier, A., Carlson, R. W. & 72 others, Chaussidon, M., Choi, B., Dauphas, N., Davis, A. M., Rocco, T. D., Fujiya, W., Hidaka, H., Homma, H., Hoppe, P., Huss, G. R., Ichida, K., Ireland, T., Ishikawa, A., Itoh, S., Kawasaki, N., Kita, N. T., Kitajima, K., Kleine, T., Komatani, S., Krot, A. N., Liu, M., McKeegan, K. D., Morita, M., Motomura, K., Moynier, F., Nakai, I., Nagashima, K., Nguyen, A., Nittler, L., Onose, M., Pack, A., Park, C., Piani, L., Qin, L., Russell, S., Sakamoto, N., Schönbächler, M., Tafla, L., Tang, H., Terada, K., Terada, Y., Usui, T., Wada, S., Walker, R. J., Yamashita, K., Yin, Q., Yoneda, S., Young, E. D., Yui, H., Zhang, A., Nakamura, T., Naraoka, H., Noguchi, T., Okazaki, R., Sakamoto, K., Yabuta, H., Abe, M., Miyazaki, A., Nakato, A., Nishimura, M., Okada, T., Yada, T., Yogata, K., Nakazawa, S., Saiki, T., Tanaka, S., Terui, F., Tsuda, Y., Watanabe, S., Yoshikawa, M., Tachibana, S. & Yurimoto, H., 2023, In: Science Advances. 9, 45, 11 p., eadi7048.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    When nets meet environmental DNA metabarcoding: integrative approach to unveil invertebrate community patterns of hypersaline lakes

    Campbell, M. A., Laini, A., White, N. E., Allentoft, Morten Erik & Saccò, M., 2023, In: Journal of Oceanology and Limnology. 41, 4, p. 1331-1340 10 p.

    Research output: Contribution to journal › Letter › Research › peer-review

  8. Published

    Where are we now with European forest multi-taxon biodiversity and where can we head to?

    Burrascano, S., Chianucci, F., Trentanovi, G., Kepfer-Rojas, S., Sitzia, T., Tinya, F., Doerfler, I., Paillet, Y., Nagel, T. A., Mitic, B., Morillas, L., Munzi, S., Van der Sluis, T., Alterio, E., Balducci, L., de Andrade, R. B., Bouget, C., Giordani, P., Lachat, T., Matosevic, D. & 117 others, Napoleone, F., Nascimbene, J., Paniccia, C., Roth, N., Aszalós, R., Brazaitis, G., Cutini, A., D'Andrea, E., De Smedt, P., Heilmann-Clausen, Jacob, Janssen, P., Kozák, D., Mårell, A., Mikoláš, M., Nordén, B., Matula, R., Schall, P., Svoboda, M., Ujhazyova, M., Vandekerkhove, K., Wohlwend, M., Xystrakis, F., Aleffi, M., Ammer, C., Archaux, F., Asbeck, T., Avtzis, D., Ayasse, M., Bagella, S., Balestrieri, R., Barbati, A., Basile, M., Bergamini, A., Bertini, G., Biscaccianti, A. B., Boch, S., Bölöni, J., Bombi, P., Boscardin, Y., Brunialti, G., Bruun, Hans Henrik, Buscot, F., Byriel, David Bille, Campagnaro, T., Campanaro, A., Chauvat, M., Ciach, M., Čiliak, M., Cistrone, L., Pereira, J. M. C., Daniel, R., De Cinti, B., De Filippo, G., Dekoninck, W., Di Salvatore, U., Dumas, Y., Elek, Z., Ferretti, F., Fotakis, D., Frank, T., Frey, J., Giancola, C., Gomoryová, E., Gosselin, M., Gosselin, F., Gossner, M. M., Götmark, F., Haeler, E., Hansen, A. K., Hertzog, L., Hofmeister, J., Hošek, J., Johannsen, VK, Justesen, Mathias Just, Korboulewsky, N., Kovács, B., Lakatos, F., Landivar, C. M., Lens, L., Lingua, E., Lombardi, F., Máliš, F., Marchino, L., Marozas, V., Matteucci, G., Mattioli, W., Møller, P. F., Müller, J., Németh, C., Ónodi, G., Parisi, F., Perot, T., Perret, S., Persiani, A. M., Portaccio, A., Posillico, M., Preikša, Ž., Rahbek, Carsten, Rappa, N. J., Ravera, S., Romano, A., Samu, F., Scheidegger, C., Schmidt, Inger Kappel, Schwegmann, S., Sicuriello, F., Spinu, A. P., Spyroglou, G., Stillhard, J., Topalidou, E., Tøttrup, Anders P., Ujházy, K., Veres, K., Verheyen, K., Weisser, W. W., Zapponi, L. & Ódor, P., 2023, In: Biological Conservation. 284, 13 p., 110176.

    Research output: Contribution to journal › Review › Research › peer-review

  9. Published

    Whole exome analyses of population structure and genotype-phenotype association in the Bombina hybrid zone

    Zacho, Claus Møller, 2023, GLOBE Institute, Faculty of Health and Medical Sciences, University of Copenhagen. 170 p.

    Research output: Book/Report › Ph.D. thesis › Research

  10. Accepted/In press

    Whole-genomes from the extinct Xerces Blue butterfly can help identify declining insect species

    de-Dios, T., Fontsere, Claudia, Renom, P., Stiller, Josefin, Llovera, L., Uliano-Silva, M., Sánchez-Gracia, A., Wright, C., Lizano, E., Caballero, B., Navarro, A., Civit, S., Robbins, R. K., Blaxter, M., Marquès-Bonet, T., Vila, R. & Lalueza-Fox, C., 2023, (Accepted/In press) In: eLife. 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    William Steffen (1947-2023): Earth system scientist with passion for people and planet

    Rockström, J. & Richardson, Katherine, 2023, In: Science. 380, 6642, p. 245 1 p.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  12. Published

    Wilson and Sarich (1969): The birth of a molecular evolution research paradigm

    Winther, Rasmus & Willerslev, Eske, 2023, In: PNAS. 120, 11, 7 p., e2220473120.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Words apart: Standardizing forestry terms and definitions across European biodiversity studies

    Trentanovi, G., Campagnaro, T., Sitzia, T., Chianucci, F., Vacchiano, G., Ammer, C., Ciach, M., Nagel, T. A., del Río, M., Paillet, Y., Munzi, S., Vandekerkhove, K., Bravo-Oviedo, A., Cutini, A., D'Andrea, E., De Smedt, P., Doerfler, I., Fotakis, D., Heilmann-Clausen, J., Hofmeister, J. & 19 others, Hošek, J., Janssen, P., Kepfer Rojas, Sebastian, Korboulewsky, N., Kovács, B., Kozák, D., Lachat, T., Mårell, A., Matula, R., Mikoláš, M., Nordén, B., Ódor, P., Perović, M., Pötzelsberger, E., Schall, P., Svoboda, M., Tinya, F., Ujházyová, M. & Burrascano, S., 2023, In: Forest Ecosystems. 10, 13 p., 100128.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    X-ray fluorescence (XRF) fingerprinting of Palaeogene deposits in Denmark

    Larsen, Nicolaj Krog, Kristensen, K. B. R., Siggaard-Andersen, Marie-Louise, Heilmann-Clausen, C. & Kjær, Kurt H., 2023, In: GEUS Bulletin. 53, 7 p., 8330.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    ZooMS, radiocarbon dating, and techno-typological re-assessment casts doubt on the supposed Late Glacial Husum LA11 skin boat fragment

    Wild, M., Jensen, Theis Zetner Trolle, Lübke, H., Hartz, S., Hüls, M., Nikulina, E. A. & Weber, M. J., 2023, In: Journal of Archaeological Science: Reports. 49, 10 p., 103885.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    euka: Robust tetrapodic and arthropodic taxa detection from modern and ancient environmental DNA using pangenomic reference graphs

    Vogel, N. A., Rubin, J. D., Swartz, M., Vlieghe, J., Sackett, P. W., Pedersen, A. G., Pedersen, Mikkel Winther & Renaud, G., 2023, In: Methods in Ecology and Evolution. 14, 11, p. 2717-2727 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    voluModel: Modelling species distributions in three-dimensional space

    Owens, Hannah Lois & Rahbek, Carsten, 2023, In: Methods in Ecology and Evolution. 14, 3, p. 841-847 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    Universiteterne har brug for en reformpause

    Kropp, K., Vallgårda, Karen Asta Arnfred, Hougaard Laustsen-Kiel, A., Albrechtsen, Nicolai Jacob Wewer, Sylow, Lykke, Damgaard, R. B., Kristensen, Line Burholt, Hansen, N. C., Uusimäki, E., Jønsson, A. B., Høyland-Kroghsbo, Nina Molin, Eriksen, J. J., Rasmussen, Laura Vang, Andersen, P. E., Jensen, Louise Kruse, Lomborg, Stine, Morueta-Holme, Naia, Simonsen, K. B., Zetterberg-Nielsen, S. & Autzen, A., 29 Jan 2023, In: Berlingske Tidende.

    Research output: Contribution to journal › Contribution to newspaper - Comment/debate › Communication

  19. Published

    Airborne environmental DNA captures terrestrial vertebrate diversity in nature

    Lynggaard, Christina Islas, Frøslev, Tobias Guldberg, Johnson, Matthew Stanley, Olsen, Morten Tange & Bohmann, Kristine, 27 Jul 2023, In: Molecular Ecology Resources. 24, 1, 20 p., e13840.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Selvfølgelig skal KU føre en ambitiøs klimapolitik

    Ejsing, Mads, Papazu, I., Racimo, Fernando, Jørgensen, M. S., Bjerre, L., el-Wakil, Alice, Rigkos-Zitthen, I., Nielsen, Anne Bach, Jordal, N. B., Christiansen, Kirstine Lund, Fals, K. B., Christensen, S., Horn, L., Andersen, G., Buerkert, J. S., Lund, Jens Friis & Appel Olsen, F., 31 Jul 2023, Universitetsavisen, Københavns Universitet.

    Research output: Other contribution › Net publication - Internet publication › Communication

  21. Published

    Jeg byggede en historisk hundeslæde fra bunden: Her er, hvad jeg lærte

    Vitale, Emma Giovanna, 12 Aug 2023, In: videnskab.dk.

    Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication

  22. Published

    Forskere og ansatte: Videregående uddannelser skal gå ind i klimakampen nu

    Ejsing, Mads, Vitting-Seerup, Sabrina, Mehlsen, D., Dalgaard Pøhler, J., Jørgensen, M. S., Achiam, Marianne, Borregaard, Michael Krabbe, Jørgensen, N. J., Hauberg-Lund Laugesen, M., Brarud Jordal, N., Nielsen, Søren Beck, Samson, K. & Andersen, N. B., 6 Oct 2023, In: Altinget.dk.

    Research output: Contribution to journal › Contribution to newspaper - Newspaper article › Communication

  23. Published

    Dead and Life in Mud: - A Split Second of 2 million years

    Luther, Rikke & Sand, Karina Krarup, 9 Nov 2023

    Research output: Non-textual form › Sound/Visual production (digital) › Communication

  24. Published

    Forskere: Dan Jørgensen er tonedøv over for Afrikas ønsker

    Jensen, Stig Eduard Breitenstein & Larsen, Rune, 12 Dec 2023, Altinget.dk.

    Research output: Other contribution › Net publication - Internet publication › Communication

  25. 2024
  26. Published

    100 ancient genomes show repeated population turnovers in Neolithic Denmark

    Allentoft, M. E., Sikora, M., Fischer, A., Sjögren, K-G., Ingason, A., Macleod, R., Rosengren, A., Schulz Paulsson, B., Jørkov, M. L. S., Novosolov, M., Stenderup, J., Price, T. D., Mortensen, M. F., Nielsen, A. B., Hede, M. U., Sørensen, L., Nielsen, P. O., Rasmussen, P., Jensen, T. Z. T., Refoyo-Martínez, A. & 48 others, Irving-Pease, Evan, Barrie, William, Pearson, A., Sousa da Mota, B., Demeter, Fabrice, Henriksen, Rasmus Henrik Amund, Vimala, Tharsika, McColl, Hugh, Vaughn, Andrew Howland, Vinner, Lasse, Renaud, Gabriel, Stern, A., Johannsen, N. N., Ramsøe, Abigail Daisy, Schork, A. J., Ruter, Anthony Henry, Gotfredsen, Anne Birgitte, Nielsen, B. H., Petersen, Erik Brinch, Kannegaard, E., Hansen, J., Pedersen, K. B., Pedersen, L., Klassen, L., Meldgaard, Morten, Johansen, M., Uldum, O. C., Lotz, P., Lysdahl, P., Bangsgaard, Pernille, Petersen, P. V., Maring, R., Iversen, Rune, Wåhlin, S., Sørensen, S. A., Andersen, S. H., Jørgensen, T., Lynnerup, Niels, Lawson, D. J., Rasmussen, Simon, Korneliussen, Thorfinn Sand, Kjær, Kurt H., Durbin, R., Nielsen, Rasmus, Delaneau, O., Werge, Thomas, Kristiansen, Kristian & Willerslev, Eske, 2024, In: Nature. 625, 7994, p. 329-337 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    3.7 billion year old detrital sediments in Greenland are consistent with active plate tectonics in the Eoarchean

    Boyd, Austin Jarl, Rosing, Minik Thorleif, Harding, Magnus August Ravn, Canfield, D. E. & Hassenkam, Tue, 2024, In: Communications Earth and Environment. 5, 7 p., 201.

    Research output: Contribution to journal › Journal article › Research › peer-review

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