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  1. Published

    Reconstructing the diet an of elusive wood grouse(western capercaillies) using metagenomics: Environmental DNA provides a non-invasive and simple means of biomonitoring

    Chua, Physilia, 12 Nov 2019. 3 p.

    Research output: Contribution to conference › Paper › Research

  2. Published

    Reconstructing the History of Biological Changes Underlying Extinction and Domestication Processes: A Tale from Ancient Horse Genomics

    Gaunitz, Charleen, 2019, Natural History Museum of Denmark, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  3. Published

    Reconstructing mechanisms of extinctions to guide mammal conservation biogeography

    Tomlinson, S., Lomolino, M. V., Woinarski, J. C. Z., Murphy, B. P., Reed, E., Johnson, C. N., Legge, S., Helgen, K. M., Brown, S. C. & Fordham, D. A., 2023, In: Journal of Biogeography. 50, 7, p. 1199-1212

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Reconstructing colonization dynamics to establish how human activities transformed island biodiversity

    Tomlinson, S., Lomolino, M. V., Anderson, A., Austin, J. J., Brown, S. C., Haythorne, S., Perry, G. L. W., Wilmshurst, J. M., Wood, J. R. & Fordham, D. A., 2024, In: Scientific Reports. 14, 1, 13 p., 5261.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Reconsidering domestication from a process archaeology perspective

    Bogaard, A., Allaby, R., Arbuckle, B. S., Bendrey, R., Crowley, S., Cucchi, T., Denham, T., Frantz, L., Fuller, D., Gilbert, M Thomas P, Karlsson, E., Manin, A., Marshall, F., Mueller, N., Peters, J., Stépanoff, C., Weide, A. & Larson, G., 2021, In: World Archaeology. 53, 1, p. 56-77 22 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Reconciling supertramps, great speciators and relict species with the taxon cycle stages of a large island radiation (Aves: Campephagidae)

    Le Pepke, M., Irestedt, M., Fjeldså, Jon, Rahbek, Carsten & Jønsson, Knud Andreas, Jun 2019, In: Journal of Biogeography. 46, 6, p. 1214-1225

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. E-pub ahead of print

    Recommendations for the reporting and interpretation of isotope dilution U-Pb geochronological information

    Condon, D., Schoene, B., Schmitz, M., Schaltegger, U., Ickert, R. B., Amelin, Y., Augland, L. E., Chamberlain, K. R., Coleman, D. S., Connelly, J. N., Corfu, F., Crowley, J. L., Davies, J. H. F. L., Denyszyn, S. W., Eddy, M. P., Gaynor, S. P., Heaman, L. M., Huyskens, M. H., Kamo, S., Kasbohm, J. & 17 others, Keller, C. B., Maclennan, S. A., McLean, N. M., Noble, S., Ovtcharova, M., Paul, A., Ramezani, J., Rioux, M., Sahy, D., Scoates, J. S., Szymanowski, D., Tapster, S., Tichomirowa, M., Wall, C. J., Wotzlaw, J., Yang, C. & Yin, Q., 2024, (E-pub ahead of print) In: Geological Society of America Bulletin. 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Recent mitochondrial lineage extinction in the critically endangered Javan rhinoceros

    Margaryan, Ashot, Sinding, Mikkel Holger Strander, Liu, Shanlin, Vieira, Filipe Garrett, Chan, Y. L., Nathan, S. K. S. S., Moodley, Y., Bruford, M. W. & Gilbert, M Thomas P, 2020, In: Zoological Journal of the Linnean Society. 190, 1, p. 372-383 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Recent advances in understanding the terminal Ediacaran Earth-life system in South China and Arctic Siberia

    Cui, H., Kaufman, A. J., Xiao, S., Grazhdankin, D. V., Peek, S., Martin, A. J., Bykova, N. V., Rogov, V. I., Liu, X. M., Zhang, F., Romaniello, S. J., Anbar, A. D., Peng, Y., Cai, Y., Schiffbauer, J. D., Meyer, M., Gilleaudeau, G. J., Plummer, R. E., Sievers, N. E., Goderis, S. & 1 others, Claeys, P., 2019, In: Estudios Geologicos. 75, 2, 4 p., e097.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Recent advances in chiral analysis of proteins and peptides

    Morvan, Marine & Mikšík, I., Aug 2021, In: Separations. 8, 8, 112.

    Research output: Contribution to journal › Review › Research › peer-review

  11. Published

    Real-time genomics for One Health

    Urban, L., Perlas, A., Francino, O., Martí-Carreras, J., Muga, B. A., Mwangi, J. W., Boykin Okalebo, L., Stanton, J-A. L., Black, A., Waipara, N., Fontsere, C., Eccles, D., Urel, H., Reska, T., Morales, H. E., Palmada-Flores, M., Marques-Bonet, T., Watsa, M., Libke, Z., Erkenswick, G. & 1 others, van Oosterhout, C., 2023, In: Molecular Systems Biology. 19, 8, 12 p., e11686.

    Research output: Contribution to journal › Review › Research › peer-review

  12. Published

    Re-visiting soil carbon and nitrogen stocks in a temperate heathland seven years after the termination of free air CO2 enrichment (FACE)

    Li, Qiaoyan, Ambus, Per Lennart, Michelsen, Anders, Schmidt, Inger Kappel, Beier, Claus, Dietzen, Christiana Amalie, Reinsch, S., Arndal, M. F. & Larsen, Klaus Steenberg, 2022, In: Geoderma. 428, 7 p., 116185.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Rarity in freshwater vascular plants across Europe and North America: Patterns, mechanisms and future scenarios

    García-Girón, J., Heino, J., Iversen, Lars Lønsmann, Helm, A. & Alahuhta, J., 2021, In: Science of the Total Environment. 786, 13 p., 147491.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Rare SLC13A1 variants associate with intervertebral disc disorder highlighting role of sulfate in disc pathology

    Bjornsdottir, G., Stefansdottir, L., Thorleifsson, G., Sulem, P., Norland, K., Ferkingstad, E., Oddsson, A., Zink, F., Lund, S. H., Nawaz, M. S., Bragi Walters, G., Skuladottir, A. T., Gudjonsson, S. A., Einarsson, G., Halldorsson, G. H., Bjarnadottir, V., Sveinbjornsson, G., Helgadottir, A., Styrkarsdottir, U., Gudmundsson, L. J. & 26 others, Pedersen, Ole Birger Vesterager, Hansen, Thomas Folkmann, Werge, Thomas, Banasik, Karina, Troelsen, Anders, Skou, S. T., Thørner, L. W., Erikstrup, C., Nielsen, K. R., Mikkelsen, S., Jonsdottir, I., Bjornsson, A., Olafsson, I. H., Ulfarsson, E., Blondal, J., Vikingsson, A., Brunak, Søren, Ostrowski, Sisse Rye, Ullum, H., Thorsteinsdottir, U., Stefansson, H., Gudbjartsson, D. F., Thorgeirsson, T. E., Stefansson, K., DBDS Genetic Consortium, D. G. C. & GO Consortium, G. C., 2022, In: Nature Communications. 13, 13 p., 634.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    Raptor roosts as invasion archives: insights from the first black rat mitochondrial genome sequenced from the Caribbean

    Espino, M. M., Mychajliw, A. M., Almonte, J. N., Allentoft, Morten Erik & Van Dam, A. R., 2022, In: Biological Invasions. 24, 1, p. 17-25 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Rapid range shifts and megafaunal extinctions associated with late Pleistocene climate change

    Seersholm, Frederik Valeur, Werndly, D. J., Grealy, A., Johnson, T., Keenan Early, E. M., Lundelius, E. L., Winsborough, B., Farr, G. E., Toomey, R., Hansen, Anders Johannes, Shapiro, B., Waters, M. R., McDonald, G., Linderholm, A., Stafford, T. W. & Bunce, M., 2020, In: Nature Communications. 11, 1, 10 p., 2770.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Published

    Rapid loss of endogenous DNA in pig bone buried in five different environments

    Eriksen, A. M. H., Matthiesen, H., Kontopoulos, I., Gregory, D., Snoeck, C., KU, thw266, Collins, Matthew James & Gilbert, M Thomas P, 2020, In: Archaeometry. 62, 4, p. 827-846 20 p.

    Research output: Contribution to journal › Review › Research › peer-review

  18. Published

    Rapid discovery of novel prophages using biological feature engineering and machine learning

    Sirén, K., Millard, A., Petersen, Bent, Gilbert, M Thomas P, Clokie, M. R. J. & Sicheritz-Pontén, Thomas, 2021, In: NAR Genomics and Bioinformatics. 3, 1, 10 p., lqaa109.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Range-wide variation in grey seal (Halichoerus grypus) skull morphology

    Galatius, A., Svendsen, M. S., Messer, D., Valtonen, M., McGowen, M., Sabin, R., Dahl, V. A., Dahl, A. B. & Olsen, Morten Tange, 2022, In: Zoology. 153, 7 p., 126023.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Range-wide priority setting for the conservation and restoration of Asian rosewood species accounting for multiple threats and ecogeographic diversity

    Gaisberger, H., Fremout, T., So, T., Thammavong, B., Bounithiphonh, C., Hoa, T. T., Yongqi, Z., Kanchanarak, T., Changtragoon, S., Sreng, S., Ping, H., Hung, T. H., Win, P. P., Hartvig, Ida, Theilade, Ida, Boshier, D., MacKay, J., Kettle, C. & Jalonen, R., 2022, In: Biological Conservation. 270, 9 p., 109560.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Range-wide differential adaptation and genomic offset in critically endangered Asian rosewoods

    Hung, T. H., So, T., Thammavong, B., Camchumroon, V., Theilade, Ida, Phourin, C., Bouamanivong, S., Hartvig, Ida, Gaisberger, H., Jalonen, R., Boshier, D. H. & MacKay, J. J., 2023, In: PNAS. 120, 33, 12 p., e2301603120.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Published

    Range and extinction dynamics of the steppe bison in Siberia: A pattern-oriented modelling approach

    Pilowsky, Julia Aaron, Haythorne, S., Brown, S. C., Krapp, M., Armstrong, E., Brook, B. W., Rahbek, Carsten & Fordham, D. A., 2022, In: Global Ecology and Biogeography. 31, 12, p. 2483-2497 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Raising your voice: evolution of narrow-band high-frequency signals in toothed whales (Odontoceti)

    Galatius, A., Olsen, Morten Tange, Steeman, M. E., Racicot, R. A., Bradshaw, C. D., Kyhn, L. A. & Miller, L. A., 2019, In: Biological Journal of the Linnean Society. 126, 2, p. 213-224

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Radiocarbon dating and isotope analysis on the purported Aurignacian skeletal remains from Fontana Nuova (Ragusa, Italy)

    Di Maida, G., Mannino, M. A., Krause-Kyora, B., Jensen, Theis Zetner Trolle & Talamo, S., 20 Mar 2019, In: PLoS ONE. 14, 3, 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. Published

    RIP mutated ITS genes in populations of Ophiocordyceps sinensis and their implications for molecular systematics

    Li, Y., Jiang, L., Wang, K., Wu, H., Yang, R., Yan, Yujing, Bushley, K. E., Hawksworth, D. L., Wu, Z. & Yao, Y., 2020, In: IMA Fungus. 11, 10 p., 18.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Published

    Quantitative and qualitative evaluation of the impact of the G2 enhancer, bead sizes and lysing tubes on the bacterial community composition during DNA extraction from recalcitrant soil core samples based on community sequencing and qPCR

    Gobbi, Alex, Santini, R. G., Filippi, E., Ellegaard-Jensen, L., Jacobsen, C. S. & Hansen, L. H., 2019, In: PLoS ONE. 14, 4, 17 p., e0200979.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Quantitative Morphological Variation in the Orange and White Fringed Orchids (Platanthera) in the Eastern US

    Hartvig, Ida, Evans, S., Ligon, J., Eserman, L., Coffey, E. & McCormick, M., 2022, In: Orchids. p. 532-539

    Research output: Contribution to journal › Journal article › Research

  28. Published

    Quantitative Human Paleogenetics: What can Ancient DNA Tell us About Complex Trait Evolution?

    Irving-Pease, Evan, Muktupavela, Rasa Audange, Dannemann, M. & Racimo, Fernando, 2021, In: Frontiers in Genetics. 12, 11 p., 703541.

    Research output: Contribution to journal › Review › Research › peer-review

  29. Published

    Quantifying uncertainty about how interventions are assigned would improve impact evaluation in conservation: reply to Rasolofoson 2022

    Gordon Jones, J. P., Barnes, M., Eklund, J., Ferraro, P. J., Geldmann, Jonas, Oldekop, J. A. & Schleicher, J., 2022, In: Conservation Biology. 36, 6, 3 p., e14007.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  30. Published

    Quantification of manganese for ChemCam Mars and laboratory spectra using a multivariate model

    Gasda, P. J., Anderson, R. B., Cousin, A., Forni, O., Clegg, S. M., Ollila, A., Lanza, N., Frydenvang, Jens, Lamm, S., Wiens, R. C., Maurice, S., Gasnault, O., Beal, R., Reyes-Newell, A. & Delapp, D., 2021, In: Spectrochimica Acta - Part B Atomic Spectroscopy. 181, 13 p., 106223.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Published

    Quantification of CO2 uptake by enhanced weathering of silicate minerals applied to acidic soils

    Dietzen, Christiana Amalie & Rosing, Minik Thorleif, 2023, In: International Journal of Greenhouse Gas Control. 125, 10 p., 103872.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. Published

    Quality of substrate and forest structure determine macrofungal richness along a gradient of management intensity in beech forests

    Atrena, A., Banelytė, G. G., Læssøe, Thomas, Riis-Hansen, R., Bruun, Hans Henrik, Rahbek, Carsten & Heilmann-Clausen, Jacob, 2020, In: Forest Ecology and Management. 478, 12 p., 118512.

    Research output: Contribution to journal › Journal article › Research › peer-review

  33. Published

    Qimmeq: Kalallit Qimmiat Qimuttoq

    Egevang, C. (ed.), Meldgaard, Morten, Andersen-Ranberg, Emilie Ulrikka, Feuerborn, Tatiana Richtman, Hansen, Anders Johannes, Houser, G., Lund Jensen, M., Langebæk, Rikke, Lennert, N., Lykke, P., Markussen, U., van den Berg, S., Sinding, Mikkel Holger Strander & Sonne, C., 2020, Copenhagen: Alle alle. 224 p.

    Research output: Book/Report › Book › Communication

  34. Published

    Purging and accumulation of genetic load in conservation

    Dussex, N., Morales Villegas, Hernan Eduardo, Grossen, C., Dalén, L. & van Oosterhout, C., 2023, In: Trends in Ecology and Evolution. 38, 10, p. 961-969 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  35. Published

    Public questions spur the discovery of new bacterial species associated with lignin bioconversion of industrial waste

    Mathews, S. L., Epps, M. J., Blackburn, R. K., Goshe, M. B., Grunden, A. M. & Dunn, Rob, 2019, In: Royal Society Open Science. 6, 3, 17 p., 180748.

    Research output: Contribution to journal › Journal article › Research › peer-review

  36. Published

    Proteomic identification of beer brewing products in the ground layer of Danish Golden Age paintings

    Di Gianvincenzo, Fabiana, Andersen, C. K., Filtenborg, T., Mackie, Meaghan, Ernst, M., Ramos Madrigal, Jazmin, Olsen, Jesper Velgaard, Wadum, J. & Cappellini, Enrico, 2023, In: Science Advances. 9, 21, 13 p., eade7686.

    Research output: Contribution to journal › Journal article › Research › peer-review

  37. Published

    Protein Tales of the Human Past: 45th Kroonvoordracht

    Welker, Frido, 2023, Huizen. 47 p. (Kroon-voordrachten).

    Research output: Book/Report › Book › Research

  38. Published

    Protecting endemic seed plants on the Tibetan Plateau under future climate change: migration matters

    Yan, Yujing & Tang, Z., 2019, In: Journal of Plant Ecology. 12, 6, p. 962-971

    Research output: Contribution to journal › Journal article › Research › peer-review

  39. Published

    Protected areas to deliver biodiversity need management effectiveness and equity

    Zafra-Calvo, N. & Geldmann, Jonas, Jun 2020, In: Global Ecology and Conservation. 22, 7 p., e01026.

    Research output: Contribution to journal › Letter › Research › peer-review

  40. Published

    Protected areas reduce deforestation and degradation and enhance woody growth across African woodlands

    McNicol, I. M., Keane, A., Burgess, Neil David, Bowers, S. J., Mitchard, E. T. A. & Ryan, C. M., 2023, In: Communications Earth and Environment. 4, 14 p., 392.

    Research output: Contribution to journal › Journal article › Research › peer-review

  41. Published

    Protected areas have a mixed impact on waterbirds, but management helps

    Wauchope, H. S., Jones, J. P. G., Geldmann, Jonas, Simmons, B. I., Amano, T., Blanco, D. E., Fuller, R. A., Johnston, A., Langendoen, T., Mundkur, T., Nagy, S. & Sutherland, W. J., 2022, In: Nature. 605, p. 103-107

    Research output: Contribution to journal › Journal article › Research › peer-review

  42. Published

    Prospects of Meta-Omic Applications on Archaeological Microbiomes

    Fotaki, Anna Katerina, 2019, Natural History Museum of Denmark, Faculty of Science, University of Copenhagen.

    Research output: Book/Report › Ph.D. thesis › Research

  43. Published

    Promises and pitfalls of using high-throughput sequencing for diet analysis

    Alberdi, Antton, Aizpurua Arrieta, Ostaizka, Bohmann, Kristine, Gopalakrishnan, Shyam, Lynggaard, Christina Islas, Nielsen, M. & Gilbert, M Thomas P, Mar 2019, In: Molecular Ecology Resources. 19, 2, p. 327-348

    Research output: Contribution to journal › Review › Research › peer-review

  44. Published

    Promises and perils of sand exploitation in Greenland

    Bendixen, M., Overeem, I., Rosing, Minik Thorleif, Bjørk, Anders Anker, Kjær, Kurt H., Kroon, Aart, Zeitz, G. & Iversen, Lars Lønsmann, 2019, In: Nature Sustainability. 2, p. 98-104 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  45. Published

    Progressive evolution of secondary aquatic adaptation in hippos and cetaceans

    Chen, L., Li, Z., Wu, B., Zhou, B., Heller, Rasmus, Zhou, J., Wang, K., Lin, Z., Wu, D. & Qiu, Q., 2022, In: Cell Discovery. 8, 4 p., 134.

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  46. Published

    Progress toward Equitably Managed Protected Areas in Aichi Target 11: A Global Survey

    Zafra-Calvo, N., Garmendia, E., Pascual, U., Palomo, I., Gross-Camp, N., Brockington, D., Cortes-Vazquez, J., Coolsaet, B. & Burgess, Neil David, 2019, In: BioScience. 69, 3, p. 191-197

    Research output: Contribution to journal › Journal article › Research › peer-review

  47. Published

    Progress for research of grape and wine culture in Georgia, the South Caucasus

    Maghradze, D., Aslanishvili, A., Mdinaradze, I., Tkemaladze, D., Mekhuzla, L., Lordkipanidze, D., Jalabadze, M., Kvavadze, E., Rusishvili, N., Mcgovern, P., This, P., Bacilieri, R., Failla, O., Cola, G., Mariani, L., Toffolatti, S. L., Lorenzis, G. D., Bianco, P. A., Quaglino, F., Wales, N. & 11 others, Gilbert, M Thomas P, Bouby, L., Kazeli, T., Ujmajuridze, L., Mamasakhlisashili, L., Batiuk, S., Graham, A., Boaretto, E., Cheishvili, A., Davitashvili, A. L. & Aurand, J. (ed.), 2019. 10 p.

    Research output: Contribution to conference › Paper › Research › peer-review

  48. Published

    Process-explicit models reveal the structure and dynamics of biodiversity patterns

    Pilowsky, Julia Aaron, Colwell, R. K., Rahbek, Carsten & Fordham, D. A., 2022, In: Science Advances. 8, 31, 12 p., eabj2271.

    Research output: Contribution to journal › Review › Research › peer-review

  49. Published

    Process-explicit models reveal pathway to extinction for woolly mammoth using pattern-oriented validation

    Fordham, D. A., Brown, S. C., Akçakaya, H. R., Brook, B. W., Haythorne, S., Manica, A., Shoemaker, K. T., Austin, J. J., Blonder, B., Pilowsky, Julia Aaron, Rahbek, Carsten & Nogues, David Bravo, 2021, In: Ecology Letters. 25, 1, p. 125-137 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  50. Published

    Probing the solar system's prenatal history: insights from coordinated isotopic, microstructural and chemical investigations of presolar silicate and oxide stardust grains

    Sanghani, M. N., 2019, Natural History Museum of Denmark, Faculty of Science, University of Copenhagen. 153 p.

    Research output: Book/Report › Ph.D. thesis › Research

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