Globe Institute

  1. Published

    Point of View: The biospheric emergency calls for scientists to change tactics

    Racimo, Fernando, Valentini, E., Rijo De León, G., Santos, T. L., Norberg, A., Atmore, L. M., Murray, M., Hakala, S. M., Appel Olsen, F., Gardner, C. & Halder, J. B., 2022, In: eLife. 11, 15 p., e83292.

    Research output: Contribution to journalJournal articleResearchpeer-review

  2. Published

    Beyond broad strokes: sociocultural insights from the study of ancient genomes

    Racimo, Fernando, Sikora, Martin, Vander Linden, M., Schroeder, Hannes & Lalueza-Fox, C., 2020, In: Nature Reviews Genetics. 21, p. 355-366 1398.

    Research output: Contribution to journalReviewResearchpeer-review

  3. Published

    The spatiotemporal spread of human migrations during the European Holocene

    Racimo, Fernando, Woodbridge, J., Fyfe, R. M., Sikora, Martin, Sjogren, K., Kristiansen, K. & Vander Linden, M., 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 16, p. 8989-9000 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    The Central Andes of Peru: a key area for the conservation of Polylepis forest biodiversity

    Quispe-Melgar, H. R., Sevillano-Ríos, C. S., Navarro Romo, W. C., Ames-Martínez, F. N., Camel, V., Fjeldså, Jon & Kessler, M., 2019, In: Journal of Ornithology. 161, p. 217-228

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Spatial Distribution and Abundance of Small Cetaceans in the Pacific Waters of Guatemala

    Quintana-Rizzo, E., Cabrera, Andrea A., Ortiz-Wolford, J. & Dávila, V., 2021, In: Frontiers in Marine Science. 8, 18 p., 674134.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published
  7. Published

    Species richness and functional structure of fish assemblages in three freshwater habitats: effects of environmental factors and management

    Queiroz-Sousa, J., Keith, S. A., David, G. S., Brandao, H., Nobile, A. B., Paes, J. V. K., Souto, A. C., Lima, F. P., Silva, R. J., Henry, R. & Richardson, Katherine, 2019, In: Journal of Fish Biology. 95, 4, p. 1125-1136

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    A frequency-amplitude coordinator and its optimal energy consumption for biological oscillators

    Qin, B., Zhao, Lei & Lin, W., 2021, In: Nature Communications. 12, 13 p., 5894.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    A new surface gliding species of Chironomidae: An independent invasion of marine environments and its evolutionary implications

    Qi, X., Lin, X., Ekrem, T., Beutel, R. G., Song, C., Orlov, I., Chen, C. & Wang, X., Jan 2019, In: Zoologica Scripta. 48, 1, p. 81-92

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles

    Põlme, S., Abarenkov, K., Nilsson, R. H., Lindahl, B. D., Clemmensen, K. E., Kauserud, H., Nguyen, N., Kjøller, R., Bates, S. T., Baldrian, P., Frøslev, T. G., Adojaan, K., Vizzini, A., Suija, A., Pfister, D., Baral, H. O., Järv, H., Madrid, H., Nordén, J., Liu, J-K. & 108 others, Pawlowska, J., Põldmaa, K., Pärtel, K., Runnel, K., Hansen, K., Larsson, K., Hyde, K. D., Sandoval-Denis, M., Smith, M. E., Toome-Heller, M., Wijayawardene, N. N., Menolli, N., Reynolds, N. K., Drenkhan, R., Maharachchikumbura, S. S. N., Gibertoni, T. B., Læssøe, Thomas, Davis, W., Tokarev, Y., Corrales, A., Soares, A. M., Agan, A., Machado, A. R., Argüelles-Moyao, A., Detheridge, A., de Meiras-Ottoni, A., Verbeken, A., Dutta, A. K., Cui, B., Pradeep, C. K., Marín, C., Stanton, D., Gohar, D., Wanasinghe, D. N., Otsing, E., Aslani, F., Griffith, G. W., Lumbsch, T. H., Grossart, H., Masigol, H., Timling, I., Hiiesalu, I., Oja, J., Kupagme, J. Y., Geml, J., Alvarez-Manjarrez, J., Ilves, K., Loit, K., Adamson, K., Nara, K., Küngas, K., Rojas-Jimenez, K., Bitenieks, K., Irinyi, L., Nagy, L. G., Soonvald, L., Zhou, L., Wagner, L., Aime, M. C., Öpik, M., Mujica, M. I., Metsoja, M., Ryberg, M., Vasar, M., Murata, M., Nelsen, M. P., Cleary, M., Samarakoon, M. C., Doilom, M., Bahram, M., Hagh-Doust, N., Dulya, O., Johnston, P., Kohout, P., Chen, Q., Tian, Q., Nandi, R., Amiri, R., Perera, R. H., Chikowski, R. D. S., Mendes-Alvarenga, R. L., Garibay-Orijel, R., Gielen, R., Phookamsak, R., Jayawardena, R. S., Rahimlou, S., Karunarathna, S. C., Tibpromma, S., Brown, S. P., Sepp, S., Mundra, S., Luo, Z., Bose, T., Vahter, T., Netherway, T., Yang, T., May, T., Varga, T., Li, W., Coimbra, V. R. M., de Oliveira, V. R. T., de Lima, V. X., Mikryukov, V. S., Lu, Y., Matsuda, Y., Miyamoto, Y., Kõljalg, U. & Tedersoo, L., 2020, In: Fungal Diversity. 105, 1, p. 1-16 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Macroecology of vegetation — Lessons learnt from the Virtual Special Issue

    Pärtel, M., Sabatini, F. M., Morueta-Holme, Naia, Kreft, H. & Dengler, J., 1 Jan 2022, In: Journal of Vegetation Science. 33, 2, 6 p., e13121.

    Research output: Contribution to journalEditorialResearchpeer-review

  12. Published

    Environmental DNA metabarcoding of Danish soil samples reveals new insight into the hidden diversity of eutardigrades in Denmark

    Pust, F. L., Frøslev, Tobias Guldberg, Kristensen, Reinhardt Møbjerg & Møbjerg, Nadja, 2024, In: Zoological Journal of the Linnean Society. 200, 1, p. 20-33

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Longitudinal analysis of pinnipeds in the northwest Atlantic provides insights on endemic circulation of phocine distemper virus

    Puryear, W., Sawatzki, K., Bogomolni, A., Hill, N., Foss, A., Stokholm, I., Olsen, M. T., Nielsen, O., Waltzek, T., Goldstein, T., Subramaniam, K., Rodrigues, T. C. S., Belaganahalli, M., Doughty, L., Becker, L., Stokes, A., Niemeyer, M., Tuttle, A., Romano, T., Linhares, M. B. & 2 others, Fauquier, D. & Runstadler, J., 2021, In: Proceedings of the Royal Society B: Biological Sciences. 288, 1962, 10 p., 20211841.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Rediscovery of the lost skink Proscelotes aenea and implications for conservation

    Puruleia, A., Nanvonamuquitxo, C., Ernesto, M., Jamal, A., Amade, I., Monia, W., Massingue, Y., Verburgt, L., Faurby, S., Antonelli, A., Perrigo, A. & Farooq, Harith Omar Morgadinho, 2023, In: Scientific Reports. 13, 9 p., 11261.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Morphological traits predict host-tree specialization in wood-inhabiting fungal communities

    Purhonen, J., Ovaskainen, O., Halme, P., Komonen, A., Huhtinen, S., Kotiranta, H., Læssøe, Thomas & Abrego, N., 2020, In: Fungal Ecology. 46, 8 p., 100863.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Wood-inhabiting fungal responses to forest naturalness vary among morpho-groups

    Purhonen, J., Abrego, N., Komonen, A., Huhtinen, S., Kotiranta, H., Læssøe, Thomas & Halme, P., 2021, In: Scientific Reports. 11, 10 p., 14585.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    How effective are protected areas for reducing threats to biodiversity? A systematic review protocol

    Pulido Chadid, Katherine, Virtanen, E. & Geldmann, Jonas, 2023, In: Environmental Evidence. 12, 10 p., 18.

    Research output: Contribution to journalReviewResearchpeer-review

  18. Published

    The formation of avian montane diversity across barriers and along elevational gradients

    Pujolar, J. M., Blom, M. P. K., Hart Reeve, A., Kennedy, J. D., Marki, P. Z., Korneliussen, Thorfinn Sand, Freeman, B. G., Sam, K., Linck, E., Haryoko, T., Iova, B., Koane, B., Maiah, G., Paul, L., Irestedt, M. & Jønsson, Knud Andreas, 2022, In: Nature Communications. 13, 13 p., 268.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    High throughput SNP chip as cost effective new monitoring tool for assessing invasion dynamics in the comb jelly Mnemiopsis leidyi

    Pujolar, J. M., Limborg, Morten Tønsberg, Ehrlich, M. & Jaspers, C., 2022, In: Frontiers in Marine Science. 9, 10 p., 1019001.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    The role of the gut microbiota in behavioral plasticity during early animal domestication

    Puetz, Lara Christine, 2023, GLOBE Institute, Faculty of Health and Medical Sciences, University of Copenhagen. 117 p.

    Research output: Book/ReportPh.D. thesisResearch

  21. Published

    Gut Microbiota Linked with Reduced Fear of Humans in Red Junglefowl Has Implications for Early Domestication

    Puetz, Lara Christine, Delmont, T. O., Aizpurua Arrieta, Ostaizka, Guo, C., KU, thw266, Katajamaa, R., Jensen, P. & Gilbert, M Thomas P, 2021, In: Advanced Genetics. 2, 4, 12 p., 2100018.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Comparative analyses identify genomic features potentially involved in the evolution of birds-of-paradise

    Prost, S., Armstrong, E. E., Nylander, J., Thomas, G. W. C., Suh, A., Petersen, Bent, Dalen, L., Benz, B. W., Blom, M. P. K., Palkopoulou, E., Ericson, P. G. P. & Irestedt, M., 2019, In: GigaScience. 8, 5, 12 p., giz003.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Human Disease Variation in the Light of Population Genomics

    Prohaska, Ana, Racimo, Fernando, Schork, A. J., Sikora, Martin, Stern, A. J., Ilardo, M., Allentoft, Morten Erik, Folkersen, L., Buil, A., Moreno Mayar, J. Víctor, Korneliussen, Thorfinn Sand, Geschwind, D., Ingason, A., Werge, Thomas, Nielsen, Rasmus & Willerslev, Eske, 2019, In: Cell. 177, 1, p. 115-131 17 p.

    Research output: Contribution to journalReviewResearchpeer-review

  24. Published

    Home Is the Sailor: Investigating the Origins of the Inhabitants of La Isabela, the First European Settlement in the New World

    Price, T. D., Tiesler, V., Zabala, P., Coppa, A., Freiwald, C., Schroeder, Hannes & Cucina, A., 2020, In: Current Anthropology. 61, 5, p. 583-602

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Warming shortens flowering seasons of tundra plant communities

    Prevéy, J. S., Rixen, C., Rüger, N., Høye, T. T., Bjørkman, A. D., Myers-Smith, I. H., Elmendorf, S. C., Ashton, I. W., Cannone, N., Chisholm, C. L., Clark, K., Cooper, E. J., Elberling, B., Fosaa, A. M., Henry, G. H. R., Hollister, R. D., Jónsdóttir, I. S., Klanderud, K., Kopp, C. W., Lévesque, E. & 18 others, Mauritz, M., Molau, U., Natali, S. M., Oberbauer, S. F., Panchen, Z. A., Post, E., Rumpf, S. B., Schmidt, N. M., Schuur, E., Semenchuk, P. R., Smith, J. G., Suding, K. N., Totland, Ø., Troxler, T., Venn, S., Wahren, C., Welker, J. M. & Wipf, S., 2019, In: Nature Ecology & Evolution. 3, 1, p. 45-52 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Palaeoproteomics resolves sloth relationships

    Presslee, S., Slater, G. J., Pujos, F., Forasiepi, A. M., Fischer, R., Molloy, K., Mackie, M., Olsen, J. V., Kramarz, A., Taglioretti, M., Scaglia, F., Lezcano, M., Lanata, J. L., Southon, J., Feranec, R., Bloch, J., Hajduk, A., Martin, F. M., Salas Gismondi, R., Reguero, M. & 6 others, de Muizon, C., Greenwood, A., Chait, B. T., Penkman, K., Collins, Matthew James & MacPhee, R. D. E., 2019, In: Nature Ecology & Evolution. 3, p. 1121-1130

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Assessment of different screening methods for selecting palaeontological bone samples for peptide sequencing

    Presslee, S., Penkman, K., Fischer, R., Richards-Slidel, E., Southon, J., Hospitaleche, C. A., Collins, M. & MacPhee, R., 2021, In: Journal of Proteomics. 230, 10 p., 103986.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published

    Evaluating the role of reference-genome phylogenetic distance on evolutionary inference

    Prasad, A., Lorenzen, Eline & Westbury, Michael Vincent, 2022, In: Molecular Ecology Resources. 22, 1, p. 45-55 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    Climate and multiple dimensions of plant diversity regulate ecosystem carbon exchange along an elevational gradient

    Prager, C. M., Jing, X., Henning, J. A., Read, Q. D., Meidl, P., Lavorel, S., Sanders, N. J., Sundqvist, M., Wardle, D. A. & Classen, A. T., 2021, In: Ecosphere. 12, 4, 14 p., e03472.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    A mechanism of expansion: Arctic deciduous shrubs capitalize on warming-induced nutrient availability

    Prager, C. M., Boelman, N. T., Eitel, J. U. H., Gersony, J. T., Greaves, H. E., Heskel, M. A., Magney, T. S., Menge, D. N. L., Naeem, S., Shen, C., Vierling, L. A. & Griffin, K. L., 2020, In: Oecologia. 192, 3, p. 671-685 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Assessing DNA Sequence Alignment Methods for Characterizing Ancient Genomes and Methylomes

    Poullet, M. & Orlando, L., 6 May 2020, In: Frontiers in Ecology and Evolution. 8, 13 p., 105.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    Mediterranean versus Atlantic monk parakeets Myiopsitta monachus: towards differentiated management at the European scale

    Postigo, J., Strubbe, D., Mori, E., Ancillotto, L., Carneiro, I., Latsoudis, P., Menchetti, M., Parau, L. G., Parrott, D., Reino, L., Weiserbs, A. & Senar, J. C., Apr 2019, In: Pest Management Science. 75, 4, p. 915-922

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    The origin and legacy of the Etruscans through a 2000-year archeogenomic time transect

    Posth, C., Zaro, V., Spyrou, M. A., Vai, S., Gnecchi-Ruscone, G. A., Modi, A., Peltzer, A., Mötsch, A., Nägele, K., Vågene, Å. J., Nelson, E. A., Radzeviciute, R., Freund, C., Bondioli, L. M., Cappuccini, L., Frenzel, H., Pacciani, E., Boschin, F., Capecchi, G., Martini, I. & 18 others, Moroni, A., Ricci, S., Sperduti, A., Turchetti, M. A., Riga, A., Zavattaro, M., Zifferero, A., Heyne, H. O., Fernández-Domínguez, E., Kroonen, Guus, McCormick, M., Haak, W., Lari, M., Barbujani, G., Bondioli, L., Bos, K. I., Caramelli, D. & Krause, J., 2021, In: Science Advances. 7, 39, 16 p., eabi7673.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    Paleogenomics: Reconstruction of plant evolutionary trajectories from modern and ancient DNA

    Pont, C., Wagner, S., Kremer, A., Orlando, L., Plomion, C. & Salse, J., 11 Feb 2019, In: Genome Biology. 20, 1, 17 p., 29.

    Research output: Contribution to journalReviewResearchpeer-review

  35. Published

    An integrated morphological-molecular approach reveals new insights on the systematics of the octocoral Telestula humilis (Thomson, 1927) (Octocorallia: Alcyonacea : Clavulariidae)

    Poliseno, A., Altuna, A., Puetz, Lara Christine, Mak, Sarah Siu Tze, Rios, P., Petroni, E., McFadden, C. S., Sørensen, Martin Vinther & Gilbert, M Thomas P, 2021, In: Invertebrate Systematics. 35, 3, p. 261-281 21 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published

    Understanding angler profiles in cases of heterogeneous count data - A travel cost model

    Pokki, H., Jacobsen, Jette Bredahl, Olsen, Søren Bøye & Romakkaniemi, A., 2020, In: Fisheries Research. 221, 11 p., 105377.

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. Published

    Inequitable Gains and Losses from Conservation in a Global Biodiversity Hotspot

    Platts, P. J., Schaafsma, M., Turner, R. K., Burgess, N. D., Fisher, B., Mbilinyi, B. P., Munishi, P. K. T., Ricketts, T. H., Swetnam, R. D., Ahrends, A., Ashagre, B. B., Bayliss, J., Gereau, R. E., Green, J. M. H., Green, R. E., Jeha, L., Lewis, S. L., Marchant, R., Marshall, A. R., Morse-Jones, S. & 5 others, Mwakalila, S., Njana, M. A., Shirima, D. D., Willcock, S. & Balmford, A., 2023, In: Environmental and Resource Economics. 86, 3, p. 381-405 25 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    Contrasting genetic signal of recolonization after rainforest fragmentation in African trees with different dispersal abilities

    Piñeiro, R., Hardy, O. J., Tovar, C., Gopalakrishnan, Shyam, Vieira, Filipe Garrett & Gilbert, M Thomas P, 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 27, 9 p., e2013979118.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    Paleoecology of extinct species

    Pittman, M. & Wang, Yucheng, 2023, In: BMC Ecology and Evolution. 23, 2 p., 59.

    Research output: Contribution to journalEditorialResearchpeer-review

  40. Published

    Bacterial topography of the upper and lower respiratory tract in pigs

    Pirolo, Mattia, Espinosa-Gongora, C., Alberdi, Antton, Eisenhofer Philipona, Raphael A, Soverini, M., Eriksen, E. Ø., Pedersen, Ken Steen & Guardabassi, Luca, 2023, In: BMC Animal Microbiome. 5, 13 p., 5.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    How the formation of Neptune shapes the Kuiper belt

    Pirani, S., Johansen, Anders & Mustill, A. J., 1 Jun 2021, In: Astronomy and Astrophysics. 650, 13 p., A161.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Understanding the Formation of Heartwood in Larch Using Synchrotron Infrared Imaging Combined With Multivariate Analysis and Atomic Force Microscope Infrared Spectroscopy

    Piqueras Solsona, S., Füchtner, S., Rocha de Oliveira, R., Gómez-Sánchez, A., Jelavic, Stanislav, Keplinger, T., de Juan, A. & Thygesen, Lisbeth Garbrecht, 2020, In: Frontiers in Plant Science. 10, 15 p., 1701.

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    Estimating the relative proportions of SARS-CoV-2 haplotypes from wastewater samples

    Pipes, L., Chen, Z., Afanaseva, S. & Nielsen, Rasmus, 2022, In: Cell Reports Methods. 2, 10, 100313.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. Published

    AncestralClust: clustering of divergent nucleotide sequences by ancestral sequence reconstruction using phylogenetic trees

    Pipes, L. & Nielsen, Rasmus, 2022, In: Bioinformatics. 38, 3, p. 663-670 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    Assessing Uncertainty in the Rooting of the SARS-CoV-2 Phylogeny

    Pipes, L., Wang, H., Huelsenbeck, J. P. & Nielsen, Rasmus, 2021, In: Molecular Biology and Evolution. 38, 4, p. 1537-1543 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Evolution of the extracytoplasmic function σ factor protein family

    Pinto, D. & Rodrigues da Fonseca, Rute Andreia, 2020, In: NAR Genomics and Bioinformatics. 2, 1, 13 p., lqz026.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    The impact of habitat loss and population fragmentation on genomic erosion

    Pinto, A. V., Hansson, B., Patramanis, Ioannis, Morales Villegas, Hernan Eduardo & van Oosterhout, C., 2024, In: Conservation Genetics. 25, 1, p. 49-57 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Genetic Evidence against a Paleolithic European Contribution to Past or Present Native Americans

    Pinotti, Thomaz & Santos, F. R., 2020, In: PaleoAmerica. 6, 2, p. 135-138

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    False-negative detections from environmental DNA collected in the presence of large numbers of killer whales (Orcinus orca)

    Pinfield, R., Dillane, E., Runge, Anne Kathrine Wiborg, Evans, A., Mirimin, L., Niemann, Jonas, Reed, T. E., Reid, D. G., Rogan, E., Samarra, F. I. P., Sigsgaard, E. E. & Foote, A. D., 2019, In: Environmental DNA. 1, 4, p. 316-328 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    Contrasting dates of rainforest fragmentation in Africa inferred from trees with different dispersal abilities

    Pineiro, R., Hardy, O. J., Tovar, C., Gopalakrishnan, Shyam, Vieira, Filipe Garrett & Gilbert, M Thomas P, 2019, 19 p. (bioRxiv).

    Research output: Working paperPreprintResearch

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