Ancient Plant Genomics in Archaeology, Herbaria, and the Environment

Research output: Contribution to journal › Review › Research › peer-review

Standard

Ancient Plant Genomics in Archaeology, Herbaria, and the Environment. / Kistler, Logan; Bieker, Vanessa C.; Martin, Michael D.; Pedersen, Mikkel Winther; Ramos Madrigal, Jazmiacuten; Wales, Nathan.

In: Annual Review of Plant Biology, Vol. 71, 2020, p. 605-629.

Research output: Contribution to journal › Review › Research › peer-review

Harvard

Kistler, L, Bieker, VC, Martin, MD, Pedersen, MW, Ramos Madrigal, J & Wales, N 2020, 'Ancient Plant Genomics in Archaeology, Herbaria, and the Environment', Annual Review of Plant Biology, vol. 71, pp. 605-629. https://doi.org/10.1146/annurev-arplant-081519-035837

APA

Kistler, L., Bieker, V. C., Martin, M. D., Pedersen, M. W., Ramos Madrigal, J., & Wales, N. (2020). Ancient Plant Genomics in Archaeology, Herbaria, and the Environment. Annual Review of Plant Biology, 71, 605-629. https://doi.org/10.1146/annurev-arplant-081519-035837

Vancouver

Kistler L, Bieker VC, Martin MD, Pedersen MW, Ramos Madrigal J, Wales N. Ancient Plant Genomics in Archaeology, Herbaria, and the Environment. Annual Review of Plant Biology. 2020;71:605-629. https://doi.org/10.1146/annurev-arplant-081519-035837

Author

Kistler, Logan ; Bieker, Vanessa C. ; Martin, Michael D. ; Pedersen, Mikkel Winther ; Ramos Madrigal, Jazmiacuten ; Wales, Nathan. / Ancient Plant Genomics in Archaeology, Herbaria, and the Environment. In: Annual Review of Plant Biology. 2020 ; Vol. 71. pp. 605-629.

Bibtex

@article{3a7f3f15847d4a108ebc0164f121eafd,
title = "Ancient Plant Genomics in Archaeology, Herbaria, and the Environment",
abstract = "The ancient DNA revolution of the past 35 years has driven an explosion in the breadth, nuance, and diversity of questions that are approachable using ancient biomolecules, and plant research has been a constant, indispensable facet of these developments. Using archaeological, paleontological, and herbarium plant tissues, researchers have probed plant domestication and dispersal, plant evolution and ecology, paleoenvironmental composition and dynamics, and other topics across related disciplines. Here, we review the development of the ancient DNA discipline and the role of plant research in its progress and refinement. We summarize our understanding of long-term plant DNA preservation and the characteristics of degraded DNA. In addition, we discuss challenges in ancient DNA recovery and analysis and the laboratory and bioinformatic strategies used to mitigate them. Finally, we review recent applications of ancient plant genomic research.",
keywords = "ancient plant DNA, archaeobotany, archaeogenomics, environmental ancient DNA, herbarium collections, paleogenomics",
author = "Logan Kistler and Bieker, {Vanessa C.} and Martin, {Michael D.} and Pedersen, {Mikkel Winther} and {Ramos Madrigal}, Jazmiacuten and Nathan Wales",
year = "2020",
doi = "10.1146/annurev-arplant-081519-035837",
language = "English",
volume = "71",
pages = "605--629",
journal = "Annual Review of Plant Biology",
issn = "1543-5008",
publisher = "Annual Reviews, inc.",

}

RIS

TY - JOUR

T1 - Ancient Plant Genomics in Archaeology, Herbaria, and the Environment

AU - Kistler, Logan

AU - Bieker, Vanessa C.

AU - Martin, Michael D.

AU - Pedersen, Mikkel Winther

AU - Ramos Madrigal, Jazmiacuten

AU - Wales, Nathan

PY - 2020

Y1 - 2020

N2 - The ancient DNA revolution of the past 35 years has driven an explosion in the breadth, nuance, and diversity of questions that are approachable using ancient biomolecules, and plant research has been a constant, indispensable facet of these developments. Using archaeological, paleontological, and herbarium plant tissues, researchers have probed plant domestication and dispersal, plant evolution and ecology, paleoenvironmental composition and dynamics, and other topics across related disciplines. Here, we review the development of the ancient DNA discipline and the role of plant research in its progress and refinement. We summarize our understanding of long-term plant DNA preservation and the characteristics of degraded DNA. In addition, we discuss challenges in ancient DNA recovery and analysis and the laboratory and bioinformatic strategies used to mitigate them. Finally, we review recent applications of ancient plant genomic research.

AB - The ancient DNA revolution of the past 35 years has driven an explosion in the breadth, nuance, and diversity of questions that are approachable using ancient biomolecules, and plant research has been a constant, indispensable facet of these developments. Using archaeological, paleontological, and herbarium plant tissues, researchers have probed plant domestication and dispersal, plant evolution and ecology, paleoenvironmental composition and dynamics, and other topics across related disciplines. Here, we review the development of the ancient DNA discipline and the role of plant research in its progress and refinement. We summarize our understanding of long-term plant DNA preservation and the characteristics of degraded DNA. In addition, we discuss challenges in ancient DNA recovery and analysis and the laboratory and bioinformatic strategies used to mitigate them. Finally, we review recent applications of ancient plant genomic research.

KW - ancient plant DNA

KW - archaeobotany

KW - archaeogenomics

KW - environmental ancient DNA

KW - herbarium collections

KW - paleogenomics

U2 - 10.1146/annurev-arplant-081519-035837

DO - 10.1146/annurev-arplant-081519-035837

M3 - Review

C2 - 32119793

AN - SCOPUS:85085266265

VL - 71

SP - 605

EP - 629

JO - Annual Review of Plant Biology

JF - Annual Review of Plant Biology

SN - 1543-5008

ER -

ID: 254994575