Conservative plumage masks extraordinary phylogenetic diversity in the Grallaria rufula (Rufous Antpitta) complex of the humid Andes

Research output: Contribution to journalJournal articleResearchpeer-review

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Conservative plumage masks extraordinary phylogenetic diversity in the Grallaria rufula (Rufous Antpitta) complex of the humid Andes. / Chesser, R. Terry; Isler, Morton L.; Cuervo, Andres M.; Cadena, C. Daniel; Galen, Spencer C.; Bergner, Laura M.; Fleischer, Robert C.; Bravo, Gustavo A.; Lane, Daniel F.; Hosner, Peter A.

In: Auk, Vol. 137, No. 3, 009, 2020.

Research output: Contribution to journalJournal articleResearchpeer-review

Harvard

Chesser, RT, Isler, ML, Cuervo, AM, Cadena, CD, Galen, SC, Bergner, LM, Fleischer, RC, Bravo, GA, Lane, DF & Hosner, PA 2020, 'Conservative plumage masks extraordinary phylogenetic diversity in the Grallaria rufula (Rufous Antpitta) complex of the humid Andes', Auk, vol. 137, no. 3, 009. https://doi.org/10.1093/auk/ukaa009

APA

Chesser, R. T., Isler, M. L., Cuervo, A. M., Cadena, C. D., Galen, S. C., Bergner, L. M., Fleischer, R. C., Bravo, G. A., Lane, D. F., & Hosner, P. A. (2020). Conservative plumage masks extraordinary phylogenetic diversity in the Grallaria rufula (Rufous Antpitta) complex of the humid Andes. Auk, 137(3), [009]. https://doi.org/10.1093/auk/ukaa009

Vancouver

Chesser RT, Isler ML, Cuervo AM, Cadena CD, Galen SC, Bergner LM et al. Conservative plumage masks extraordinary phylogenetic diversity in the Grallaria rufula (Rufous Antpitta) complex of the humid Andes. Auk. 2020;137(3). 009. https://doi.org/10.1093/auk/ukaa009

Author

Chesser, R. Terry ; Isler, Morton L. ; Cuervo, Andres M. ; Cadena, C. Daniel ; Galen, Spencer C. ; Bergner, Laura M. ; Fleischer, Robert C. ; Bravo, Gustavo A. ; Lane, Daniel F. ; Hosner, Peter A. / Conservative plumage masks extraordinary phylogenetic diversity in the Grallaria rufula (Rufous Antpitta) complex of the humid Andes. In: Auk. 2020 ; Vol. 137, No. 3.

Bibtex

@article{f605f25f92f342ffaa680ac663406f6a,
title = "Conservative plumage masks extraordinary phylogenetic diversity in the Grallaria rufula (Rufous Antpitta) complex of the humid Andes",
abstract = "The Grallaria rufula complex is currently considered to consist of 2 species, G. rufula (Rufous Antpitta) and G. blakei (Chestnut Antpitta). However, it has been suggested that the complex, populations of which occur in humid montane forests from Venezuela to Bolivia, comprises a suite of vocally distinct yet morphologically cryptic species. We sequenced nuclear and mitochondrial DNA for 80 individuals from across the distribution of the complex to determine the extent of genetic variation between and within described taxa. Our results revealed 18 geographically coherent clades separated by substantial genetic divergence: 14 within rufula, 3 within blakei, and 1 corresponding to G. rufocinerea (Bicolored Antpitta), a species with distinctive plumage found to be nested within the complex. Neither G. rufula nor G. blakei as presently defined was monophyletic. Although 6 of the 7 recognized subspecies of G. rufula were monophyletic, several subspecies contained substantial genetic differentiation. Genetic variation was largely partitioned across recognized geographic barriers, especially across deep river valleys in Peru and Colombia. Coalescent modeling identified 17 of the 18 clades as significantly differentiated lineages, whereas analyses of vocalizations delineated 16 biological species within the complex. The G. rufula complex seems unusually diverse even among birds of the humid Andes, a prime location for cryptic speciation; however, the extent to which other dispersal-limited Andean species groups exhibit similar degrees of cryptic differentiation awaits further study.",
keywords = "Andes, cryptic species, Grallaria rufula, Grallariidae, Rufous Antpitta, species limits, GENETIC DIFFERENTIATION, EVOLUTIONARY DIFFERENTIATION, SPECIES DELIMITATION, GEOGRAPHIC-VARIATION, CRYPTIC DIVERSITY, AVES, SPECIATION, GENUS, DIVERSIFICATION, BIRDS",
author = "Chesser, {R. Terry} and Isler, {Morton L.} and Cuervo, {Andres M.} and Cadena, {C. Daniel} and Galen, {Spencer C.} and Bergner, {Laura M.} and Fleischer, {Robert C.} and Bravo, {Gustavo A.} and Lane, {Daniel F.} and Hosner, {Peter A.}",
year = "2020",
doi = "10.1093/auk/ukaa009",
language = "English",
volume = "137",
journal = "Ornithology",
issn = "0004-8038",
publisher = "American Ornithological Society",
number = "3",

}

RIS

TY - JOUR

T1 - Conservative plumage masks extraordinary phylogenetic diversity in the Grallaria rufula (Rufous Antpitta) complex of the humid Andes

AU - Chesser, R. Terry

AU - Isler, Morton L.

AU - Cuervo, Andres M.

AU - Cadena, C. Daniel

AU - Galen, Spencer C.

AU - Bergner, Laura M.

AU - Fleischer, Robert C.

AU - Bravo, Gustavo A.

AU - Lane, Daniel F.

AU - Hosner, Peter A.

PY - 2020

Y1 - 2020

N2 - The Grallaria rufula complex is currently considered to consist of 2 species, G. rufula (Rufous Antpitta) and G. blakei (Chestnut Antpitta). However, it has been suggested that the complex, populations of which occur in humid montane forests from Venezuela to Bolivia, comprises a suite of vocally distinct yet morphologically cryptic species. We sequenced nuclear and mitochondrial DNA for 80 individuals from across the distribution of the complex to determine the extent of genetic variation between and within described taxa. Our results revealed 18 geographically coherent clades separated by substantial genetic divergence: 14 within rufula, 3 within blakei, and 1 corresponding to G. rufocinerea (Bicolored Antpitta), a species with distinctive plumage found to be nested within the complex. Neither G. rufula nor G. blakei as presently defined was monophyletic. Although 6 of the 7 recognized subspecies of G. rufula were monophyletic, several subspecies contained substantial genetic differentiation. Genetic variation was largely partitioned across recognized geographic barriers, especially across deep river valleys in Peru and Colombia. Coalescent modeling identified 17 of the 18 clades as significantly differentiated lineages, whereas analyses of vocalizations delineated 16 biological species within the complex. The G. rufula complex seems unusually diverse even among birds of the humid Andes, a prime location for cryptic speciation; however, the extent to which other dispersal-limited Andean species groups exhibit similar degrees of cryptic differentiation awaits further study.

AB - The Grallaria rufula complex is currently considered to consist of 2 species, G. rufula (Rufous Antpitta) and G. blakei (Chestnut Antpitta). However, it has been suggested that the complex, populations of which occur in humid montane forests from Venezuela to Bolivia, comprises a suite of vocally distinct yet morphologically cryptic species. We sequenced nuclear and mitochondrial DNA for 80 individuals from across the distribution of the complex to determine the extent of genetic variation between and within described taxa. Our results revealed 18 geographically coherent clades separated by substantial genetic divergence: 14 within rufula, 3 within blakei, and 1 corresponding to G. rufocinerea (Bicolored Antpitta), a species with distinctive plumage found to be nested within the complex. Neither G. rufula nor G. blakei as presently defined was monophyletic. Although 6 of the 7 recognized subspecies of G. rufula were monophyletic, several subspecies contained substantial genetic differentiation. Genetic variation was largely partitioned across recognized geographic barriers, especially across deep river valleys in Peru and Colombia. Coalescent modeling identified 17 of the 18 clades as significantly differentiated lineages, whereas analyses of vocalizations delineated 16 biological species within the complex. The G. rufula complex seems unusually diverse even among birds of the humid Andes, a prime location for cryptic speciation; however, the extent to which other dispersal-limited Andean species groups exhibit similar degrees of cryptic differentiation awaits further study.

KW - Andes

KW - cryptic species

KW - Grallaria rufula

KW - Grallariidae

KW - Rufous Antpitta

KW - species limits

KW - GENETIC DIFFERENTIATION

KW - EVOLUTIONARY DIFFERENTIATION

KW - SPECIES DELIMITATION

KW - GEOGRAPHIC-VARIATION

KW - CRYPTIC DIVERSITY

KW - AVES

KW - SPECIATION

KW - GENUS

KW - DIVERSIFICATION

KW - BIRDS

U2 - 10.1093/auk/ukaa009

DO - 10.1093/auk/ukaa009

M3 - Journal article

VL - 137

JO - Ornithology

JF - Ornithology

SN - 0004-8038

IS - 3

M1 - 009

ER -

ID: 255101574