DNA-Based Arthropod Diversity Assessment in Amazonian Iron Mine Lands Show Ecological Succession Towards Undisturbed Reference Sites

Research output: Contribution to journalJournal articleResearchpeer-review

Standard

DNA-Based Arthropod Diversity Assessment in Amazonian Iron Mine Lands Show Ecological Succession Towards Undisturbed Reference Sites. / Lynggaard, Christina; Yu, Douglas W.; Oliveira, Guilherme; Caldeira, Cecilio F.; Ramos, Silvio J.; Ellegaard, Martin R.; Gilbert, M. Thomas P.; Gastauer, Markus; Bohmann, Kristine.

In: Frontiers in Ecology and Evolution, Vol. 8, 590976, 2020.

Research output: Contribution to journalJournal articleResearchpeer-review

Harvard

Lynggaard, C, Yu, DW, Oliveira, G, Caldeira, CF, Ramos, SJ, Ellegaard, MR, Gilbert, MTP, Gastauer, M & Bohmann, K 2020, 'DNA-Based Arthropod Diversity Assessment in Amazonian Iron Mine Lands Show Ecological Succession Towards Undisturbed Reference Sites', Frontiers in Ecology and Evolution, vol. 8, 590976. https://doi.org/10.3389/fevo.2020.590976

APA

Lynggaard, C., Yu, D. W., Oliveira, G., Caldeira, C. F., Ramos, S. J., Ellegaard, M. R., Gilbert, M. T. P., Gastauer, M., & Bohmann, K. (2020). DNA-Based Arthropod Diversity Assessment in Amazonian Iron Mine Lands Show Ecological Succession Towards Undisturbed Reference Sites. Frontiers in Ecology and Evolution, 8, [590976]. https://doi.org/10.3389/fevo.2020.590976

Vancouver

Lynggaard C, Yu DW, Oliveira G, Caldeira CF, Ramos SJ, Ellegaard MR et al. DNA-Based Arthropod Diversity Assessment in Amazonian Iron Mine Lands Show Ecological Succession Towards Undisturbed Reference Sites. Frontiers in Ecology and Evolution. 2020;8. 590976. https://doi.org/10.3389/fevo.2020.590976

Author

Lynggaard, Christina ; Yu, Douglas W. ; Oliveira, Guilherme ; Caldeira, Cecilio F. ; Ramos, Silvio J. ; Ellegaard, Martin R. ; Gilbert, M. Thomas P. ; Gastauer, Markus ; Bohmann, Kristine. / DNA-Based Arthropod Diversity Assessment in Amazonian Iron Mine Lands Show Ecological Succession Towards Undisturbed Reference Sites. In: Frontiers in Ecology and Evolution. 2020 ; Vol. 8.

Bibtex

@article{bf5a5765d4c149ac8ad49b52026aff39,
title = "DNA-Based Arthropod Diversity Assessment in Amazonian Iron Mine Lands Show Ecological Succession Towards Undisturbed Reference Sites",
abstract = "Human activities change natural landscapes, and in doing so endanger biodiversity and associated ecosystem services. To reduce the net impacts of these activities, such as mining, disturbed areas are rehabilitated and restored. During this process, monitoring is important to ensure that desired trajectories are maintained. In the Carajas region of the Brazilian Amazon, exploration for iron ores has transformed the original ecosystem; natural forest and a savanna formation with lateritic iron duricrust outcrops named canga. Here, native vegetation is logged and topsoil removed and deposited in waste piles along with mine waste. During rehabilitation, these waste piles are hydroseeded with non-native plant species to achieve rapid revegetation. Further, seeds of native canga and forest plant species are planted to point ecological succession towards natural ecosystems. In this study, we investigate diversity and composition of the arthropod community along a post-mining rehabilitation and restoration gradient, taking seasonality and primer bias into account. We use DNA metabarcoding of bulk arthropod samples collected in both the dry and rainy seasons from waste-pile benches at various stages of revegetation: non-revegetated exposed soils, initial stage with one-to-three-year-old stands, intermediate stage with four-to-five-year-old stands, and advanced stage with six-to-seven-year-old stands. We use samples from undisturbed cangas and forests as reference sites. In addition, we vegetation diversity and structure were measured to investigate relations between arthropod community and vegetation structure. Our results show that, over time, the arthropod community composition of the waste piles becomes more similar to the reference forests, but not to the reference cangas. Nevertheless, even the communities in the advanced-stage waste piles are different from the reference forests, and full restoration in these highly diverse ecosystems is not achieved, even after 6 to 7 years. Finally, our results show seasonal variation in arthropod communities and primer bias.",
keywords = "Amazon, arthropods, metabarcoding, mining, rehabilitation, R PACKAGE, BIODIVERSITY ASSESSMENT, RESTORATION SUCCESS, FOREST, REHABILITATION, EXTRAPOLATION, RAREFACTION, INDICATORS, ABUNDANCE, PCR",
author = "Christina Lynggaard and Yu, {Douglas W.} and Guilherme Oliveira and Caldeira, {Cecilio F.} and Ramos, {Silvio J.} and Ellegaard, {Martin R.} and Gilbert, {M. Thomas P.} and Markus Gastauer and Kristine Bohmann",
year = "2020",
doi = "10.3389/fevo.2020.590976",
language = "English",
volume = "8",
journal = "Frontiers in Ecology and Evolution",
issn = "2296-701X",
publisher = "Frontiers Media",

}

RIS

TY - JOUR

T1 - DNA-Based Arthropod Diversity Assessment in Amazonian Iron Mine Lands Show Ecological Succession Towards Undisturbed Reference Sites

AU - Lynggaard, Christina

AU - Yu, Douglas W.

AU - Oliveira, Guilherme

AU - Caldeira, Cecilio F.

AU - Ramos, Silvio J.

AU - Ellegaard, Martin R.

AU - Gilbert, M. Thomas P.

AU - Gastauer, Markus

AU - Bohmann, Kristine

PY - 2020

Y1 - 2020

N2 - Human activities change natural landscapes, and in doing so endanger biodiversity and associated ecosystem services. To reduce the net impacts of these activities, such as mining, disturbed areas are rehabilitated and restored. During this process, monitoring is important to ensure that desired trajectories are maintained. In the Carajas region of the Brazilian Amazon, exploration for iron ores has transformed the original ecosystem; natural forest and a savanna formation with lateritic iron duricrust outcrops named canga. Here, native vegetation is logged and topsoil removed and deposited in waste piles along with mine waste. During rehabilitation, these waste piles are hydroseeded with non-native plant species to achieve rapid revegetation. Further, seeds of native canga and forest plant species are planted to point ecological succession towards natural ecosystems. In this study, we investigate diversity and composition of the arthropod community along a post-mining rehabilitation and restoration gradient, taking seasonality and primer bias into account. We use DNA metabarcoding of bulk arthropod samples collected in both the dry and rainy seasons from waste-pile benches at various stages of revegetation: non-revegetated exposed soils, initial stage with one-to-three-year-old stands, intermediate stage with four-to-five-year-old stands, and advanced stage with six-to-seven-year-old stands. We use samples from undisturbed cangas and forests as reference sites. In addition, we vegetation diversity and structure were measured to investigate relations between arthropod community and vegetation structure. Our results show that, over time, the arthropod community composition of the waste piles becomes more similar to the reference forests, but not to the reference cangas. Nevertheless, even the communities in the advanced-stage waste piles are different from the reference forests, and full restoration in these highly diverse ecosystems is not achieved, even after 6 to 7 years. Finally, our results show seasonal variation in arthropod communities and primer bias.

AB - Human activities change natural landscapes, and in doing so endanger biodiversity and associated ecosystem services. To reduce the net impacts of these activities, such as mining, disturbed areas are rehabilitated and restored. During this process, monitoring is important to ensure that desired trajectories are maintained. In the Carajas region of the Brazilian Amazon, exploration for iron ores has transformed the original ecosystem; natural forest and a savanna formation with lateritic iron duricrust outcrops named canga. Here, native vegetation is logged and topsoil removed and deposited in waste piles along with mine waste. During rehabilitation, these waste piles are hydroseeded with non-native plant species to achieve rapid revegetation. Further, seeds of native canga and forest plant species are planted to point ecological succession towards natural ecosystems. In this study, we investigate diversity and composition of the arthropod community along a post-mining rehabilitation and restoration gradient, taking seasonality and primer bias into account. We use DNA metabarcoding of bulk arthropod samples collected in both the dry and rainy seasons from waste-pile benches at various stages of revegetation: non-revegetated exposed soils, initial stage with one-to-three-year-old stands, intermediate stage with four-to-five-year-old stands, and advanced stage with six-to-seven-year-old stands. We use samples from undisturbed cangas and forests as reference sites. In addition, we vegetation diversity and structure were measured to investigate relations between arthropod community and vegetation structure. Our results show that, over time, the arthropod community composition of the waste piles becomes more similar to the reference forests, but not to the reference cangas. Nevertheless, even the communities in the advanced-stage waste piles are different from the reference forests, and full restoration in these highly diverse ecosystems is not achieved, even after 6 to 7 years. Finally, our results show seasonal variation in arthropod communities and primer bias.

KW - Amazon

KW - arthropods

KW - metabarcoding

KW - mining

KW - rehabilitation

KW - R PACKAGE

KW - BIODIVERSITY ASSESSMENT

KW - RESTORATION SUCCESS

KW - FOREST

KW - REHABILITATION

KW - EXTRAPOLATION

KW - RAREFACTION

KW - INDICATORS

KW - ABUNDANCE

KW - PCR

U2 - 10.3389/fevo.2020.590976

DO - 10.3389/fevo.2020.590976

M3 - Journal article

VL - 8

JO - Frontiers in Ecology and Evolution

JF - Frontiers in Ecology and Evolution

SN - 2296-701X

M1 - 590976

ER -

ID: 254997350