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Skmer: assembly-free and alignment-free sample identification using genome skims. / Sarmashghi, Shahab; Bohmann, Kristine; Gilbert, M. Thomas P.; Bafna, Vineet; Mirarab, Siavash.
In:
Genome Biology, Vol. 20, 34, 2019.
Research output: Contribution to journal › Journal article › Research › peer-review
Harvard
Sarmashghi, S
, Bohmann, K, Gilbert, MTP, Bafna, V & Mirarab, S 2019, '
Skmer: assembly-free and alignment-free sample identification using genome skims',
Genome Biology, vol. 20, 34.
https://doi.org/10.1186/s13059-019-1632-4APA
Sarmashghi, S.
, Bohmann, K., Gilbert, M. T. P., Bafna, V., & Mirarab, S. (2019).
Skmer: assembly-free and alignment-free sample identification using genome skims.
Genome Biology,
20, [34].
https://doi.org/10.1186/s13059-019-1632-4Vancouver
Sarmashghi S
, Bohmann K, Gilbert MTP, Bafna V, Mirarab S.
Skmer: assembly-free and alignment-free sample identification using genome skims.
Genome Biology. 2019;20. 34.
https://doi.org/10.1186/s13059-019-1632-4Author
Sarmashghi, Shahab ; Bohmann, Kristine ; Gilbert, M. Thomas P. ; Bafna, Vineet ; Mirarab, Siavash. / Skmer: assembly-free and alignment-free sample identification using genome skims. In: Genome Biology. 2019 ; Vol. 20.
Bibtex
@article{78c9f1ecb1cc48848c1e0d1fc7a1ade1,
title = "Skmer: assembly-free and alignment-free sample identification using genome skims",
keywords = "Assembly-free, Alignment-free, DNA Barcoding, Genome skimming, DNA reference database, Second generation sequencing",
author = "Shahab Sarmashghi and Kristine Bohmann and Gilbert, {M. Thomas P.} and Vineet Bafna and Siavash Mirarab",
year = "2019",
doi = "10.1186/s13059-019-1632-4",
language = "English",
volume = "20",
journal = "Genome Biology (Online Edition)",
issn = "1474-7596",
publisher = "BioMed Central Ltd.",
}
RIS
TY - JOUR
T1 - Skmer: assembly-free and alignment-free sample identification using genome skims
AU - Sarmashghi, Shahab
AU - Bohmann, Kristine
AU - Gilbert, M. Thomas P.
AU - Bafna, Vineet
AU - Mirarab, Siavash
PY - 2019
Y1 - 2019
KW - Assembly-free
KW - Alignment-free
KW - DNA Barcoding
KW - Genome skimming
KW - DNA reference database
KW - Second generation sequencing
U2 - 10.1186/s13059-019-1632-4
DO - 10.1186/s13059-019-1632-4
M3 - Journal article
C2 - 30760303
VL - 20
JO - Genome Biology (Online Edition)
JF - Genome Biology (Online Edition)
SN - 1474-7596
M1 - 34
ER -
