The genomes of Darwin's primroses reveal chromosome-scale adaptive introgression and differential permeability of species boundaries

Research output: Contribution to journalJournal articleResearchpeer-review

Standard

The genomes of Darwin's primroses reveal chromosome-scale adaptive introgression and differential permeability of species boundaries. / Stubbs, Rebecca L.; Theodoridis, Spyros; Mora-Carrera, Emiliano; Keller, Barbara; Potente, Giacomo; Yousefi, Narjes; Jay, Paul; Léveillé-Bourret, Étienne; Choudhury, Rimjhim Roy; Celep, Ferhat; Kochjarová, Judita; Conti, Elena.

In: New Phytologist, Vol. 241, No. 2, 2024, p. 911-925.

Research output: Contribution to journalJournal articleResearchpeer-review

Harvard

Stubbs, RL, Theodoridis, S, Mora-Carrera, E, Keller, B, Potente, G, Yousefi, N, Jay, P, Léveillé-Bourret, É, Choudhury, RR, Celep, F, Kochjarová, J & Conti, E 2024, 'The genomes of Darwin's primroses reveal chromosome-scale adaptive introgression and differential permeability of species boundaries', New Phytologist, vol. 241, no. 2, pp. 911-925. https://doi.org/10.1111/nph.19361

APA

Stubbs, R. L., Theodoridis, S., Mora-Carrera, E., Keller, B., Potente, G., Yousefi, N., Jay, P., Léveillé-Bourret, É., Choudhury, R. R., Celep, F., Kochjarová, J., & Conti, E. (2024). The genomes of Darwin's primroses reveal chromosome-scale adaptive introgression and differential permeability of species boundaries. New Phytologist, 241(2), 911-925. https://doi.org/10.1111/nph.19361

Vancouver

Stubbs RL, Theodoridis S, Mora-Carrera E, Keller B, Potente G, Yousefi N et al. The genomes of Darwin's primroses reveal chromosome-scale adaptive introgression and differential permeability of species boundaries. New Phytologist. 2024;241(2):911-925. https://doi.org/10.1111/nph.19361

Author

Stubbs, Rebecca L. ; Theodoridis, Spyros ; Mora-Carrera, Emiliano ; Keller, Barbara ; Potente, Giacomo ; Yousefi, Narjes ; Jay, Paul ; Léveillé-Bourret, Étienne ; Choudhury, Rimjhim Roy ; Celep, Ferhat ; Kochjarová, Judita ; Conti, Elena. / The genomes of Darwin's primroses reveal chromosome-scale adaptive introgression and differential permeability of species boundaries. In: New Phytologist. 2024 ; Vol. 241, No. 2. pp. 911-925.

Bibtex

@article{eea800fbb2f54da9b419b0e9948d20f4,
title = "The genomes of Darwin's primroses reveal chromosome-scale adaptive introgression and differential permeability of species boundaries",
abstract = "Introgression is an important source of genetic variation that can determine species adaptation to environmental conditions. Yet, definitive evidence of the genomic and adaptive implications of introgression in nature remains scarce. The widespread hybrid zones of Darwin's primroses (Primula elatior, Primula veris, and Primula vulgaris) provide a unique natural laboratory for studying introgression in flowering plants and the varying permeability of species boundaries. Through analysis of 650 genomes, we provide evidence of an introgressed genomic region likely to confer adaptive advantage in conditions of soil toxicity. We also document unequivocal evidence of chloroplast introgression, an important precursor to species-wide chloroplast capture. Finally, we provide the first evidence that the S-locus supergene, which controls heterostyly in primroses, does not introgress in this clade. Our results contribute novel insights into the adaptive role of introgression and demonstrate the importance of extensive genomic and geographical sampling for illuminating the complex nature of species boundaries.",
keywords = "adaptive introgression, genomics, hybridization, Primula, whole-genome resequencing",
author = "Stubbs, {Rebecca L.} and Spyros Theodoridis and Emiliano Mora-Carrera and Barbara Keller and Giacomo Potente and Narjes Yousefi and Paul Jay and {\'E}tienne L{\'e}veill{\'e}-Bourret and Choudhury, {Rimjhim Roy} and Ferhat Celep and Judita Kochjarov{\'a} and Elena Conti",
note = "Publisher Copyright: {\textcopyright} 2023 The Authors New Phytologist {\textcopyright} 2023 New Phytologist Foundation.",
year = "2024",
doi = "10.1111/nph.19361",
language = "English",
volume = "241",
pages = "911--925",
journal = "New Phytologist",
issn = "0028-646X",
publisher = "Academic Press",
number = "2",

}

RIS

TY - JOUR

T1 - The genomes of Darwin's primroses reveal chromosome-scale adaptive introgression and differential permeability of species boundaries

AU - Stubbs, Rebecca L.

AU - Theodoridis, Spyros

AU - Mora-Carrera, Emiliano

AU - Keller, Barbara

AU - Potente, Giacomo

AU - Yousefi, Narjes

AU - Jay, Paul

AU - Léveillé-Bourret, Étienne

AU - Choudhury, Rimjhim Roy

AU - Celep, Ferhat

AU - Kochjarová, Judita

AU - Conti, Elena

N1 - Publisher Copyright: © 2023 The Authors New Phytologist © 2023 New Phytologist Foundation.

PY - 2024

Y1 - 2024

N2 - Introgression is an important source of genetic variation that can determine species adaptation to environmental conditions. Yet, definitive evidence of the genomic and adaptive implications of introgression in nature remains scarce. The widespread hybrid zones of Darwin's primroses (Primula elatior, Primula veris, and Primula vulgaris) provide a unique natural laboratory for studying introgression in flowering plants and the varying permeability of species boundaries. Through analysis of 650 genomes, we provide evidence of an introgressed genomic region likely to confer adaptive advantage in conditions of soil toxicity. We also document unequivocal evidence of chloroplast introgression, an important precursor to species-wide chloroplast capture. Finally, we provide the first evidence that the S-locus supergene, which controls heterostyly in primroses, does not introgress in this clade. Our results contribute novel insights into the adaptive role of introgression and demonstrate the importance of extensive genomic and geographical sampling for illuminating the complex nature of species boundaries.

AB - Introgression is an important source of genetic variation that can determine species adaptation to environmental conditions. Yet, definitive evidence of the genomic and adaptive implications of introgression in nature remains scarce. The widespread hybrid zones of Darwin's primroses (Primula elatior, Primula veris, and Primula vulgaris) provide a unique natural laboratory for studying introgression in flowering plants and the varying permeability of species boundaries. Through analysis of 650 genomes, we provide evidence of an introgressed genomic region likely to confer adaptive advantage in conditions of soil toxicity. We also document unequivocal evidence of chloroplast introgression, an important precursor to species-wide chloroplast capture. Finally, we provide the first evidence that the S-locus supergene, which controls heterostyly in primroses, does not introgress in this clade. Our results contribute novel insights into the adaptive role of introgression and demonstrate the importance of extensive genomic and geographical sampling for illuminating the complex nature of species boundaries.

KW - adaptive introgression

KW - genomics

KW - hybridization

KW - Primula

KW - whole-genome resequencing

U2 - 10.1111/nph.19361

DO - 10.1111/nph.19361

M3 - Journal article

C2 - 37921572

AN - SCOPUS:85175793554

VL - 241

SP - 911

EP - 925

JO - New Phytologist

JF - New Phytologist

SN - 0028-646X

IS - 2

ER -

ID: 372829632