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A genomic history of aboriginal Australia. / Malaspinas, Anna Sapfo; Westaway, Michael C.; Muller, Craig Edwin; Sousa, Vitor C.; Lao, Oscar; Alves, Isabel; Bergström, Anders; Athanasiadis, Georgios; Cheng, Jade Yu; Crawford, Jacob E.; Heupink, Tim H.; Macholdt, Enrico; Peischl, Stephan; Rasmussen, Simon; Schiffels, Stephan; Subramanian, Sankar; Wright, Joanne L; Albrechtsen, Anders; Barbieri, Chiara; Dupanloup, Isabelle; Eriksson, Anders; Margaryan, Ashot; Moltke, Ida; Pugach, Irina; Korneliussen, Thorfinn Sand; Levkivskyi, Ivan P.; Moreno Mayar, José Victor; Ni, Shengyu; Racimo, Fernando; Sikora, Martin; Xue, Yali; Aghakhanian, Farhang A.; Brucato, Nicolas; Brunak, Søren; Campos, Paula; Clark, Warren; Ellingvåg, Sturla; Fourmile, Gudjugudju; Gerbault, Pascale; Injie, Darren; Koki, George; Leavesley, Matthew; Logan, Betty; Lynch, Aubrey; Matisoo-Smith, Elizabeth A.; McAllister, Peter J.; Mentzer, Alexander J.; Metspalu, Mait; Migliano, Andrea B; Murgha, Les; Phipps, Maude E; Pomat, William; Reynolds, Doc; Ricaut, Francois-Xavier; Siba, Peter; Thomas, Mark G.; Wales, Thomas; Wall, Colleen Ma'run; Oppenheimer, Stephen J; Tyler-Smith, Chris; Durbin, Richard; Dortch, Joe; Manica, Andrea; Schierup, Mikkel H.; Foley, Robert A.; Lahr, Marta Mirazón; Bowern, Claire; Wall, Jeffrey D.; Mailund, Thomas; Stoneking, Mark; Nielsen, Rasmus; Sandhu, Manjinder S.; Excoffier, Laurent; Lambert, David M.; Willerslev, Eske.
In:
Nature, Vol. 538, No. 7624, 2016, p. 207-214.
Research output: Contribution to journal › Journal article › Research › peer-review
Harvard
Malaspinas, AS, Westaway, MC, Muller, CE, Sousa, VC, Lao, O, Alves, I, Bergström, A, Athanasiadis, G, Cheng, JY, Crawford, JE, Heupink, TH, Macholdt, E, Peischl, S
, Rasmussen, S, Schiffels, S, Subramanian, S, Wright, JL
, Albrechtsen, A, Barbieri, C, Dupanloup, I, Eriksson, A
, Margaryan, A, Moltke, I, Pugach, I
, Korneliussen, TS, Levkivskyi, IP
, Moreno Mayar, JV, Ni, S, Racimo, F
, Sikora, M, Xue, Y, Aghakhanian, FA, Brucato, N
, Brunak, S, Campos, P, Clark, W, Ellingvåg, S, Fourmile, G, Gerbault, P, Injie, D, Koki, G, Leavesley, M, Logan, B, Lynch, A, Matisoo-Smith, EA, McAllister, PJ, Mentzer, AJ, Metspalu, M, Migliano, AB, Murgha, L, Phipps, ME, Pomat, W, Reynolds, D, Ricaut, F-X, Siba, P, Thomas, MG, Wales, T, Wall, CM, Oppenheimer, SJ, Tyler-Smith, C, Durbin, R, Dortch, J, Manica, A, Schierup, MH, Foley, RA, Lahr, MM, Bowern, C, Wall, JD, Mailund, T, Stoneking, M
, Nielsen, R, Sandhu, MS, Excoffier, L, Lambert, DM
& Willerslev, E 2016, '
A genomic history of aboriginal Australia',
Nature, vol. 538, no. 7624, pp. 207-214.
https://doi.org/10.1038/nature18299APA
Malaspinas, A. S., Westaway, M. C., Muller, C. E., Sousa, V. C., Lao, O., Alves, I., Bergström, A., Athanasiadis, G., Cheng, J. Y., Crawford, J. E., Heupink, T. H., Macholdt, E., Peischl, S.
, Rasmussen, S., Schiffels, S., Subramanian, S., Wright, J. L.
, Albrechtsen, A., Barbieri, C.
, ... Willerslev, E. (2016).
A genomic history of aboriginal Australia.
Nature,
538(7624), 207-214.
https://doi.org/10.1038/nature18299Vancouver
Malaspinas AS, Westaway MC, Muller CE, Sousa VC, Lao O, Alves I et al.
A genomic history of aboriginal Australia.
Nature. 2016;538(7624):207-214.
https://doi.org/10.1038/nature18299Author
Malaspinas, Anna Sapfo ; Westaway, Michael C. ; Muller, Craig Edwin ; Sousa, Vitor C. ; Lao, Oscar ; Alves, Isabel ; Bergström, Anders ; Athanasiadis, Georgios ; Cheng, Jade Yu ; Crawford, Jacob E. ; Heupink, Tim H. ; Macholdt, Enrico ; Peischl, Stephan ; Rasmussen, Simon ; Schiffels, Stephan ; Subramanian, Sankar ; Wright, Joanne L ; Albrechtsen, Anders ; Barbieri, Chiara ; Dupanloup, Isabelle ; Eriksson, Anders ; Margaryan, Ashot ; Moltke, Ida ; Pugach, Irina ; Korneliussen, Thorfinn Sand ; Levkivskyi, Ivan P. ; Moreno Mayar, José Victor ; Ni, Shengyu ; Racimo, Fernando ; Sikora, Martin ; Xue, Yali ; Aghakhanian, Farhang A. ; Brucato, Nicolas ; Brunak, Søren ; Campos, Paula ; Clark, Warren ; Ellingvåg, Sturla ; Fourmile, Gudjugudju ; Gerbault, Pascale ; Injie, Darren ; Koki, George ; Leavesley, Matthew ; Logan, Betty ; Lynch, Aubrey ; Matisoo-Smith, Elizabeth A. ; McAllister, Peter J. ; Mentzer, Alexander J. ; Metspalu, Mait ; Migliano, Andrea B ; Murgha, Les ; Phipps, Maude E ; Pomat, William ; Reynolds, Doc ; Ricaut, Francois-Xavier ; Siba, Peter ; Thomas, Mark G. ; Wales, Thomas ; Wall, Colleen Ma'run ; Oppenheimer, Stephen J ; Tyler-Smith, Chris ; Durbin, Richard ; Dortch, Joe ; Manica, Andrea ; Schierup, Mikkel H. ; Foley, Robert A. ; Lahr, Marta Mirazón ; Bowern, Claire ; Wall, Jeffrey D. ; Mailund, Thomas ; Stoneking, Mark ; Nielsen, Rasmus ; Sandhu, Manjinder S. ; Excoffier, Laurent ; Lambert, David M. ; Willerslev, Eske. / A genomic history of aboriginal Australia. In: Nature. 2016 ; Vol. 538, No. 7624. pp. 207-214.
Bibtex
@article{4dc50d64410f414abede6042a27e89a9,
title = "A genomic history of aboriginal Australia",
abstract = "The population history of Aboriginal Australians remains largely uncharacterized. Here we generate high-coverage genomes for 83 Aboriginal Australians (speakers of Pama-Nyungan languages) and 25 Papuans from the New Guinea Highlands. We find that Papuan and Aboriginal Australian ancestors diversified 25-40 thousand years ago (kya), suggesting pre-Holocene population structure in the ancient continent of Sahul (Australia, New Guinea and Tasmania). However, all of the studied Aboriginal Australians descend from a single founding population that differentiated ~10-32 kya. We infer a population expansion in northeast Australia during the Holocene epoch (past 10,000 years) associated with limited gene flow from this region to the rest of Australia, consistent with the spread of the Pama-Nyungan languages. We estimate that Aboriginal Australians and Papuans diverged from Eurasians 51-72 kya, following a single out-of-Africa dispersal, and subsequently admixed with archaic populations. Finally, we report evidence of selection in Aboriginal Australians potentially associated with living in the desert.",
author = "Malaspinas, {Anna Sapfo} and Westaway, {Michael C.} and Muller, {Craig Edwin} and Sousa, {Vitor C.} and Oscar Lao and Isabel Alves and Anders Bergstr{\"o}m and Georgios Athanasiadis and Cheng, {Jade Yu} and Crawford, {Jacob E.} and Heupink, {Tim H.} and Enrico Macholdt and Stephan Peischl and Simon Rasmussen and Stephan Schiffels and Sankar Subramanian and Wright, {Joanne L} and Anders Albrechtsen and Chiara Barbieri and Isabelle Dupanloup and Anders Eriksson and Ashot Margaryan and Ida Moltke and Irina Pugach and Korneliussen, {Thorfinn Sand} and Levkivskyi, {Ivan P.} and {Moreno Mayar}, {Jos{\'e} Victor} and Shengyu Ni and Fernando Racimo and Martin Sikora and Yali Xue and Aghakhanian, {Farhang A.} and Nicolas Brucato and S{\o}ren Brunak and Paula Campos and Warren Clark and Sturla Ellingv{\aa}g and Gudjugudju Fourmile and Pascale Gerbault and Darren Injie and George Koki and Matthew Leavesley and Betty Logan and Aubrey Lynch and Matisoo-Smith, {Elizabeth A.} and McAllister, {Peter J.} and Mentzer, {Alexander J.} and Mait Metspalu and Migliano, {Andrea B} and Les Murgha and Phipps, {Maude E} and William Pomat and Doc Reynolds and Francois-Xavier Ricaut and Peter Siba and Thomas, {Mark G.} and Thomas Wales and Wall, {Colleen Ma'run} and Oppenheimer, {Stephen J} and Chris Tyler-Smith and Richard Durbin and Joe Dortch and Andrea Manica and Schierup, {Mikkel H.} and Foley, {Robert A.} and Lahr, {Marta Miraz{\'o}n} and Claire Bowern and Wall, {Jeffrey D.} and Thomas Mailund and Mark Stoneking and Rasmus Nielsen and Sandhu, {Manjinder S.} and Laurent Excoffier and Lambert, {David M.} and Eske Willerslev",
year = "2016",
doi = "10.1038/nature18299",
language = "English",
volume = "538",
pages = "207--214",
journal = "Nature",
issn = "0028-0836",
publisher = "nature publishing group",
number = "7624",
}
RIS
TY - JOUR
T1 - A genomic history of aboriginal Australia
AU - Malaspinas, Anna Sapfo
AU - Westaway, Michael C.
AU - Muller, Craig Edwin
AU - Sousa, Vitor C.
AU - Lao, Oscar
AU - Alves, Isabel
AU - Bergström, Anders
AU - Athanasiadis, Georgios
AU - Cheng, Jade Yu
AU - Crawford, Jacob E.
AU - Heupink, Tim H.
AU - Macholdt, Enrico
AU - Peischl, Stephan
AU - Rasmussen, Simon
AU - Schiffels, Stephan
AU - Subramanian, Sankar
AU - Wright, Joanne L
AU - Albrechtsen, Anders
AU - Barbieri, Chiara
AU - Dupanloup, Isabelle
AU - Eriksson, Anders
AU - Margaryan, Ashot
AU - Moltke, Ida
AU - Pugach, Irina
AU - Korneliussen, Thorfinn Sand
AU - Levkivskyi, Ivan P.
AU - Moreno Mayar, José Victor
AU - Ni, Shengyu
AU - Racimo, Fernando
AU - Sikora, Martin
AU - Xue, Yali
AU - Aghakhanian, Farhang A.
AU - Brucato, Nicolas
AU - Brunak, Søren
AU - Campos, Paula
AU - Clark, Warren
AU - Ellingvåg, Sturla
AU - Fourmile, Gudjugudju
AU - Gerbault, Pascale
AU - Injie, Darren
AU - Koki, George
AU - Leavesley, Matthew
AU - Logan, Betty
AU - Lynch, Aubrey
AU - Matisoo-Smith, Elizabeth A.
AU - McAllister, Peter J.
AU - Mentzer, Alexander J.
AU - Metspalu, Mait
AU - Migliano, Andrea B
AU - Murgha, Les
AU - Phipps, Maude E
AU - Pomat, William
AU - Reynolds, Doc
AU - Ricaut, Francois-Xavier
AU - Siba, Peter
AU - Thomas, Mark G.
AU - Wales, Thomas
AU - Wall, Colleen Ma'run
AU - Oppenheimer, Stephen J
AU - Tyler-Smith, Chris
AU - Durbin, Richard
AU - Dortch, Joe
AU - Manica, Andrea
AU - Schierup, Mikkel H.
AU - Foley, Robert A.
AU - Lahr, Marta Mirazón
AU - Bowern, Claire
AU - Wall, Jeffrey D.
AU - Mailund, Thomas
AU - Stoneking, Mark
AU - Nielsen, Rasmus
AU - Sandhu, Manjinder S.
AU - Excoffier, Laurent
AU - Lambert, David M.
AU - Willerslev, Eske
PY - 2016
Y1 - 2016
N2 - The population history of Aboriginal Australians remains largely uncharacterized. Here we generate high-coverage genomes for 83 Aboriginal Australians (speakers of Pama-Nyungan languages) and 25 Papuans from the New Guinea Highlands. We find that Papuan and Aboriginal Australian ancestors diversified 25-40 thousand years ago (kya), suggesting pre-Holocene population structure in the ancient continent of Sahul (Australia, New Guinea and Tasmania). However, all of the studied Aboriginal Australians descend from a single founding population that differentiated ~10-32 kya. We infer a population expansion in northeast Australia during the Holocene epoch (past 10,000 years) associated with limited gene flow from this region to the rest of Australia, consistent with the spread of the Pama-Nyungan languages. We estimate that Aboriginal Australians and Papuans diverged from Eurasians 51-72 kya, following a single out-of-Africa dispersal, and subsequently admixed with archaic populations. Finally, we report evidence of selection in Aboriginal Australians potentially associated with living in the desert.
AB - The population history of Aboriginal Australians remains largely uncharacterized. Here we generate high-coverage genomes for 83 Aboriginal Australians (speakers of Pama-Nyungan languages) and 25 Papuans from the New Guinea Highlands. We find that Papuan and Aboriginal Australian ancestors diversified 25-40 thousand years ago (kya), suggesting pre-Holocene population structure in the ancient continent of Sahul (Australia, New Guinea and Tasmania). However, all of the studied Aboriginal Australians descend from a single founding population that differentiated ~10-32 kya. We infer a population expansion in northeast Australia during the Holocene epoch (past 10,000 years) associated with limited gene flow from this region to the rest of Australia, consistent with the spread of the Pama-Nyungan languages. We estimate that Aboriginal Australians and Papuans diverged from Eurasians 51-72 kya, following a single out-of-Africa dispersal, and subsequently admixed with archaic populations. Finally, we report evidence of selection in Aboriginal Australians potentially associated with living in the desert.
U2 - 10.1038/nature18299
DO - 10.1038/nature18299
M3 - Journal article
C2 - 27654914
VL - 538
SP - 207
EP - 214
JO - Nature
JF - Nature
SN - 0028-0836
IS - 7624
ER -
