Tom Gilbert
Professor
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Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts
Rasmussen, Jacob Agerbo, Villumsen, Kasper Rømer, Duchene, David, Puetz, Lara Christine, Delmont, T. O., Sveier, H., Jørgensen, Louise von Gersdorff, Præbel, K., Martin, M. D., Bojesen, Anders Miki, Gilbert, M Thomas P, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2021, In: Communications Biology. 4, 10 p., 579.Research output: Contribution to journal › Journal article › Research › peer-review
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Co-diversification of an intestinal Mycoplasma and its salmonid host
Rasmussen, Jacob Agerbo, Kiilerich, P., Madhun, A. S., Waagbø, R., Lock, E. J. R., Madsen, L., Gilbert, M Thomas P, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2023, In: ISME Journal. 17, 5, p. 682-692 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Palaeogenomic insights into the origins of French grapevine diversity
Ramos Madrigal, Jazmin, Runge, Anne Kathrine Wiborg, Bouby, L., Lacombe, T., Samaniego Castruita, J. A., Adam-Blondon, A., Figueiral, I., Hallavant, C., Schaal, C., Töpfer, R., Petersen, Bent, Sicheritz-Pontén, T., This, P., Bacilieri, R., Gilbert, M Thomas P & Wales, N., 2019, In: Nature Plants. 5, 6, p. 595-603 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Genomes of Pleistocene Siberian Wolves Uncover Multiple Extinct Wolf Lineages
Ramos-Madrigal, J., Sinding, M-H. S., Carøe, C., Mak, S. S. T., Niemann, J., Samaniego Castruita, J. A., Fedorov, S., Kandyba, A., Germonpré, M., Bocherens, H., Feuerborn, T. R., Pitulko, V. V., Pavlova, E. Y., Nikolskiy, P. A., Kasparov, A. K., Ivanova, V. V., Larson, G., Frantz, L. A. F., Willerslev, E., Meldgaard, M. & 7 others, , 2020, In: Current biology : CB. 31, p. 198-206Research output: Contribution to journal › Journal article › Research › peer-review
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Genome sequence of a 5,310-year-old maize cob provides insights into the early stages of maize domestication
Ramos Madrigal, Jazmin, Smith, B. D., Moreno Mayar, J. Víctor, Gopalakrishnan, Shyam, Ross-Ibarra, J., Gilbert, M Thomas P & Wales, N., 2016, In: Current Biology. 26, 23, p. 3195-3201 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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The genetic prehistory of the New World Arctic
Raghavan, M., DeGiorgio, M., Albrechtsen, A., Moltke, I., Skoglund, P., Korneliussen, T. S., Grønnow, B., Appelt, M., Gulløv, H. C., Friesen, T. M., Fitzhugh, W., Malmström, H. S., Rasmussen, S., Olsen, J., Melchior, L. C., Fuller, B. T., Fahrni, S. M., Stafford jr., T., Grimes, V., Renouf, M. A. P. & 36 others, , 2014, In: Science. 345, 6200, 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Gut Microbiota Linked with Reduced Fear of Humans in Red Junglefowl Has Implications for Early Domestication
Puetz, Lara Christine, Delmont, T. O., Aizpurua Arrieta, Ostaizka, Guo, C., KU, thw266, Katajamaa, R., Jensen, P. & Gilbert, M Thomas P, 2021, In: Advanced Genetics. 2, 4, 12 p., 2100018.Research output: Contribution to journal › Journal article › Research › peer-review
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An integrated morphological-molecular approach reveals new insights on the systematics of the octocoral Telestula humilis (Thomson, 1927) (Octocorallia: Alcyonacea : Clavulariidae)
Poliseno, A., Altuna, A., Puetz, Lara Christine, Mak, Sarah Siu Tze, Rios, P., Petroni, E., McFadden, C. S., Sørensen, Martin Vinther & Gilbert, M Thomas P, 2021, In: Invertebrate Systematics. 35, 3, p. 261-281 21 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Contrasting genetic signal of recolonization after rainforest fragmentation in African trees with different dispersal abilities
Piñeiro, R., Hardy, O. J., Tovar, C., Gopalakrishnan, Shyam, Vieira, Filipe Garrett & Gilbert, M Thomas P, 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 27, 9 p., e2013979118.Research output: Contribution to journal › Journal article › Research › peer-review
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Convergent transcriptional specializations in the brains of humans and song-learning birds
Pfenning, A. R., Hara, E., Whitney, O., Rivas, M. V., Wang, R., Roulhac, P. L., Howard, J. T., Wirthlin, M., Lovell, P. V., Ganapathy, G., Mouncastle, J., Moseley, M. A., Thompson, J. W., Soderblom, E. J., Iriki, A., Kato, M., Gilbert, M. T. P., Zhang, G., Bakken, T., Bongaarts, A. & 5 others, , 2014, In: Science. 346, 6215, 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Dire wolves were the last of an ancient New World canid lineage
Perri, A. R., Mitchell, K. J., Mouton, A., Alvarez-Carretero, S., Hulme-Beaman, A., Haile, J., Jamieson, A., Meachen, J., Lin, A. T., Schubert, B. W., Ameen, C., Antipina, E. E., Bover, P., Brace, S., Carmagnini, A., Carøe, C., Samaniego Castruita, J. A., Chatters, J. C., Dobney, K., dos Reis, M. & 29 others, , 2021, In: Nature. 591, p. 87-91Research output: Contribution to journal › Journal article › Research › peer-review
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Evolutionary genomics and adaptive evolution of the hedgehog gene family (Shh, Ihh and Dhh) in vertebrates
Pereira, J., Johnson, W. E., O'Brien, S. J., Jarvis, E. D., KU, thw266, Gilbert, M Thomas P, Vasconcelos, V. & Antunes, A., 2014, In: PloS one. 9, 12, 35 p., e74132.Research output: Contribution to journal › Journal article › Research › peer-review
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Future-proofing environmental DNA and trait-based predictions of food webs
Pereira, Catia Lucio, Ersoy, Z., Gilbert, M Thomas P, Gravel, D., Araújo, M. B. & Matias, M. G., 2023, In: BioScience. 73, 12, p. 862-878 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Fine-tuning biodiversity assessments: A framework to pair eDNA metabarcoding and morphological approaches
Pereira, Catia Lucio, Gilbert, M Thomas P, Araújo, M. B. & Matias, M. G., 2021, In: Methods in Ecology and Evolution. 12, 12, p. 2397-2409 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Ancient and modern environmental DNA
Pedersen, Mikkel Winther, Overballe-Petersen, S., Ermini, L., Der Sarkissian, C., Haile, James Seymour, Hellström, A. M., Spens, J., Thomsen, P. F., Bohmann, Kristine, Cappellini, Enrico, Schnell, I. B., Wales, N., Carøe, C., Campos, P., Schmidt, A. M. Z., Gilbert, M Thomas P, Hansen, Anders Johannes, Orlando, L. A. A. & Willerslev, Eske, 2015, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 370, 1660, 11 p., 20130383.Research output: Contribution to journal › Review › Research › peer-review
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Genome-wide nucleosome map and cytosine methylation levels of an ancient human genome
Pedersen, J. S., Valen, E., Velazquez, A. M. V., Parker, B. J., Rasmussen, M., Lindgreen, S., Lilje, B., Tobin, D. J., Kelly, T. K., Vang, S., Andersson, R., Jones, P. A., Hoover, C. A., Tikhonov, A., Prokhortchouk, E., Rubin, E. M., Sandelin, A. G., Gilbert, M. T. P., Krogh, A., Willerslev, E. & 1 others, , 2014, In: Genome Research. 24, 3, p. 454-466 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic
Patrono, L. V., Vrancken, B., Budt, M., Düx, A., Lequime, S., Boral, S., Gilbert, M. T. P., Gogarten, J. F., Hoffmann, L., Horst, D., Merkel, K., Morens, D., Prepoint, B., Schlotterbeck, J., Schuenemann, V. J., Suchard, M. A., Taubenberger, J. K., Tenkhoff, L., Urban, C., Widulin, N. & 6 others, , 2022, In: Nature Communications. 13, 9 p., 2314.Research output: Contribution to journal › Journal article › Research › peer-review
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Glacial survival of boreal trees in northern Scandinavia
Parducci, L., Jørgensen, T., Tollefsrud, M. M., Elverland, E., Alm, T., Fontana, S. L., Bennett, K. D., Haile, J. S., Matetovici, I., Suyama, Y., Edwards, M. E., Andersen, K., Rasmussen, M., Boessenkool, S., Coissac, E., Brochmann, C., Taberlet, P., Houmark-Nielsen, M., Larsen, N. K., Orlando, L. A. A. & 4 others, , 2 Mar 2012, In: Science. 335, 6072, p. 1083-1086 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
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High-coverage genomes to elucidate the evolution of penguins
Pan, H., Cole, T. L., Bi, X., Fang, M., Zhou, C., Yang, Z., Ksepka, D. T., Hart, T., Bouzat, J. L., Argilla, L. S., Bertelsen, M. F., Boersma, P. D., Bost, C. A., Cherel, Y., Dann, P., Fiddaman, S. R., Howard, P., Labuschagne, K., Mattern, T., Miller, G. & 26 others, , 2019, In: GigaScience. 8, 9, p. 1-17Research output: Contribution to journal › Journal article › Research › peer-review
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Mitogenomic analyses from ancient DNA
Paijmans, J. L. A., Gilbert, M Thomas P & Hofreiter, M., Nov 2013, In: Molecular Phylogenetics and Evolution. 69, 2, p. 404-416 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Evolutionary history of Saber-toothed cats based on ancient mitogenomics
Paijmans, J. L. A., Barnett, R., Gilbert, M Thomas P, Zepeda Mendoza, M. L., Reumer, J. W. F., de Vos, J., Zazula, G., Nagel, D., Baryshnikov, G. F., Leonard, J. A., Rohland, N., Westbury, Michael Vincent, Barlow, A. & Hofreiter, M., 6 Nov 2017, In: Current Biology. 27, 21, p. 3330-3336 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Darwin's Fancy Revised: An Updated Understanding of the Genomic Constitution of Pigeon Breeds
Antunes Pacheco, George, van Grouw, H., Shapiro, M. D., Gilbert, M Thomas P & Vieira, Filipe Garrett, 2020, In: Genome Biology and Evolution. 12, 3, p. 136-150 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Fossil avian eggshell preserves ancient DNA
Oskam, C. L., Haile, James Seymour, McLay, E., Rigby, P., Allentoft, Morten Erik, Olsen, M. E., Bengtsson, C., Miller, G. H., Schwenninger, J., Jacomb, C., Walter, R., Baynes, A., Dortch, J., Parker-Pearson, M., Gilbert, M Thomas P, Holdaway, R. N., Willerslev, Eske & Bunce, M., 7 Jul 2010, In: Royal Society of London. Proceedings B. Biological Sciences. 277, 1690, p. 1991-2000 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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True single-molecule DNA sequencing of a pleistocene horse bone
Orlando, L. A. A., Ginolhac, A., Raghavan, M., Mouatt, J. T. V., Rasmussen, M., Magnussen, K., Steinmann, K. E., Kapranov, P., Thompson, J. F., Zazula, G., Froese, D., Moltke, Ida, Shapiro, B., Hofreiter, M., Al-Rasheid, K. A. S., Gilbert, M Thomas P & Willerslev, Eske, 2011, In: Genome Research. 21, 10, p. 1705-1719 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 12980
Most downloads
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6190
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Reconstructing genome evolution in historic samples of the Irish potato famine pathogen
Research output: Contribution to journal › Journal article › Research › peer-review
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5645
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Deep sequencing of RNA from ancient maize kernels
Research output: Contribution to journal › Journal article › Research › peer-review
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5253
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True single-molecule DNA sequencing of a pleistocene horse bone
Research output: Contribution to journal › Journal article › Research › peer-review
Published