Antonio Fernandez Guerra

Antonio Fernandez Guerra

Tenure Track Assistant Professor


Publication year:
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1 - 25 out of 40Page size: 25
  1. 2023
  2. Published

    Genomic adaptation of giant viruses in polar oceans

    Meng, L., Delmont, T. O., Gaïa, M., Pelletier, E., Fernandez Guerra, Antonio, Chaffron, S., Neches, R. Y., Wu, J., Kaneko, H., Endo, H. & Ogata, H., 2023, In: Nature Communications. 14, 12 p., 6233.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Inter-comparison of marine microbiome sampling protocols

    Pascoal, F., Tomasino, M. P., Piredda, R., Quero, G. M., Torgo, L., Poulain, J., Galand, P. E., Fuhrman, J. A., Mitchell, A., Tinta, T., Turk Dermastia, T., Fernandez-Guerra, A., Vezzi, A., Logares, R., Malfatti, F., Endo, H., Dąbrowska, A. M., De Pascale, F., Sánchez, P., Henry, N. & 9 others, Fosso, B., Wilson, B., Toshchakov, S., Ferrant, G. K., Grigorov, I., Vieira, F. R. J., Costa, R., Pesant, S. & Magalhães, C., 2023, In: ISME communications. 3, 16 p., 84.

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    Mirusviruses link herpesviruses to giant viruses

    Gaïa, M., Meng, L., Pelletier, E., Forterre, P., Vanni, C., Fernandez Guerra, Antonio, Jaillon, O., Wincker, P., Ogata, H., Krupovic, M. & Delmont, T. O., 2023, In: Nature. 616, 7958, p. 783-789 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. 2022
  6. Published

    A 2-million-year-old ecosystem in Greenland uncovered by environmental DNA

    Kjær, K. H., Pedersen, M. W., De Sanctis, B., De Cahsan, B., Korneliussen, T. S., Michelsen, C. S., Sand, K. K., Jelavić, S., Ruter, A. H., Schmidt, A. M. A., Kjeldsen, K. K., Tesakov, A. S., Snowball, I., Gosse, J. C., Alsos, I. G., Wang, Y., Dockter, C., Rasmussen, M., Jørgensen, M. E., Skadhauge, B. & 19 others, Prohaska, Ana, Kristensen, J. Å., Bjerager, M., Allentoft, Morten Erik, Coissac, E., Rouillard, Alexandra, Simakova, A., Fernandez Guerra, Antonio, Bowler, C., Macias-Fauria, M., Vinner, Lasse, Welch, J. J., Hidy, A. J., Sikora, Martin, Collins, Matthew James, Durbin, R., Larsen, Nicolaj Krog, Willerslev, Eske & PhyloNorway Consortium, P. C., 2022, In: Nature. 612, 7939, p. 283-291 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean

    Delmont, T. O., Gaia, M., Hinsinger, D. D., Frémont, P., Vanni, C., Fernandez-Guerra, A., Eren, A. M., Kourlaiev, A., d'Agata, L., Clayssen, Q., Villar, E., Labadie, K., Cruaud, C., Poulain, J., Da Silva, C., Wessner, M., Noel, B., Aury, J-M., Sunagawa, S., Acinas, S. G. & 30 others, Bork, P., Karsenti, E., Bowler, C., Sardet, C., Stemmann, L., de Vargas, C., Wincker, P., Lescot, M., Babin, M., Gorsky, G., Grimsley, N., Guidi, L., Hingamp, P., Jaillon, O., Kandels, S., Iudicone, D., Ogata, H., Pesant, S., Sullivan, M. B., Not, F., Lee, K. B., Boss, E., Cochrane, G., Follows, M., Poulton, N., Raes, J., Sieracki, M., Speich, S., Pelletier, E. & Tara Oceans Coordinators, T. O. C., 2022, In: Cell Genomics. 2, 5, 17 p., 100123.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems

    Richter, D. J., Watteaux, R., Vannier, T., Leconte, J., Frémont, P., Reygondeau, G., Maillet, N., Henry, N., Benoit, G., Da Silva, O., Delmont, T. O., Fernàndez-Guerra, A., Suweis, S., Narci, R., Berney, C., Eveillard, D., Gavory, F., Guidi, L., Labadie, K., Mahieu, E. & 27 others, Poulain, J., Romac, S., Roux, S., Dimier, C., Kandels, S., Picheral, M., Searson, S., Pesant, S., Aury, J., Brum, J. R., Lemaitre, C., Pelletier, E., Bork, P., Sunagawa, S., Lombard, F., Karp-Boss, L., Bowler, C., Sullivan, M. B., Karsenti, E., Mariadassou, M., Probert, I., Peterlongo, P., Wincker, P., de Vargas, C., d'Alcalà, M. R., Iudicone, D. & Jaillon, O., 2022, In: eLife. 11, 30 p., e78129.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Renewal of planktonic foraminifera diversity after the Cretaceous Paleogene mass extinction by benthic colonizers

    Morard, R., Hassenrück, C., Greco, M., Fernandez Guerra, Antonio, Rigaud, S., Douady, C. J. & Kucera, M., 2022, In: Nature Communications. 13, 9 p., 7135.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Reply to: When did mammoths go extinct?

    Wang, Y., Prohaska, A., Dong, H., Alberti, A., Alsos, I. G., Beilman, D. W., Bjørk, A. A., Cao, J., Cherezova, A. A., Coissac, E., De Sanctis, B., Denoeud, F., Dockter, C., Durbin, R., Edwards, M. E., Edwards, N. R., Esdale, J., Fedorov, G. B., Fernandez-Guerra, A., Froese, D. G. & 32 others, Gusarova, G., Haile, James Seymour, Holden, P. B., Kjeldsen, Kristian Kjellerup, Kjær, Kurt H., Korneliussen, Thorfinn Sand, Lammers, Y., Larsen, Nicolaj Krog, Macleod, R., Mangerud, J., McColl, Hugh, Merkel, M. K. F., Money, D., Möller, P., Nogues, David Bravo, Orlando, L., Owens, Hannah Lois, Pedersen, Mikkel Winther, Racimo, Fernando, Rahbek, Carsten, Rasic, J. T., Rouillard, Alexandra, Ruter, Anthony Henry, Skadhauge, B., Svendsen, J. I., Tikhonov, A., Vinner, Lasse, Wincker, P., Xing, Y., Zhang, Y., Meltzer, D. J. & Willerslev, Eske, 2022, In: Nature. 612, 7938, p. E4-E6

    Research output: Contribution to journal › Comment/debate › Research › peer-review

  11. Published

    Unifying the known and unknown microbial coding sequence space

    Vanni, C., Schechter, M. S., Acinas, S. G., Barberán, A., Buttigieg, P. L., Casamayor, E. O., Delmont, T. O., Duarte, C. M., Eren, A. M., Finn, R. D., Kottmann, R., Mitchell, A., Sánchez, P., Siren, K., Steinegger, M., Glöckner, F. O. & Fernandez Guerra, Antonio, 2022, In: eLife. 11, 60 p., e67667.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. 2021
  13. Published

    Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir

    Yates, J. A. F., Andrades Valtuena, A., Vågene, Åshild Joanne, Cribdon, B., Velsko, I. M., Borry, M., Bravo-Lopez, M. J., Fernandez Guerra, Antonio, Green, E. J., Ramachandran, S. L., Heintzman, P. D., Spyrou, M. A., Huebner, A., Gancz, A. S., Hider, J., Allshouse, A. F., Zaro, V. & Warinner, C., 2021, In: Scientific Data. 8, 8 p., 31.

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    Community-led, integrated, reproducible multi-omics with anvi'o

    Eren, A. M., Kiefl, E., Shaiber, A., Veseli, I., Miller, S. E., Schechter, M. S., Fink, I., Pan, J. N., Yousef, M., Fogarty, E. C., Trigodet, F., Watson, A. R., Esen, O. C., Moore, R. M., Clayssen, Q., Lee, M. D., Kivenson, V., Graham, E. D., Merrill, B. D., Karkman, A. & 14 others, Blankenberg, D., Eppley, J. M., Sjodin, A., Scott, J. J., Vazquez-Campos, X., McKay, L. J., McDaniel, E. A., Stevens, S. L. R., Anderson, R. E., Fuessel, J., Fernandez Guerra, Antonio, Maignien, L., Delmont, T. O. & Willis, A. D., 2021, In: Nature Microbiology. 6, 1, p. 3-6 4 p.

    Research output: Contribution to journal › Editorial › Research › peer-review

  15. Published

    Late Quaternary dynamics of Arctic biota from ancient environmental genomics: [+ Correction]

    Wang, Y., Pedersen, M. W., Alsos, I. G., De Sanctis, B., Racimo, F., Prohaska, A., Coissac, E., Owens, H. L., Merkel, M. K. F., Fernandez-Guerra, A., Rouillard, A., Lammers, Y., Alberti, A., Denoeud, F., Money, D., Ruter, A. H., McColl, H., Larsen, N. K., Cherezova, A. A., Edwards, M. E. & 30 others, Fedorov, G. B., Haile, James Seymour, Orlando, L., Vinner, Lasse, Korneliussen, Thorfinn Sand, Beilman, D. W., Bjørk, Anders Anker, Cao, Jialu, Dockter, C., Esdale, J., Gusarova, G., Kjeldsen, Kristian Kjellerup, Mangerud, J., Rasic, J. T., Skadhauge, B., Svendsen, J. I., Tikhonov, A., Wincker, P., Xing, Y., Zhang, Y., Froese, D. G., Rahbek, Carsten, Nogues, David Bravo, Holden, P. B., Edwards, N. R., Durbin, R., Meltzer, D. J., Kjær, Kurt H., Möller, P. & Willerslev, Eske, 2021, In: Nature. 600, 7887, p. 86–92 19 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Secondary metabolite biosynthetic diversity in Arctic Ocean metagenomes

    Rego, A., Fernandez Guerra, Antonio, Duarte, P., Assmy, P., Leão, P. N. & Magalhães, C., 2021, In: Microbial genomics. 7, 12, 14 p., 000731.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. 2020
  18. Published

    A computational framework to explore large-scale biosynthetic diversity

    Navarro-Muñoz, J. C., Selem-Mojica, N., Mullowney, M. W., Kautsar, S. A., Tryon, J. H., Parkinson, E. I., De Los Santos, E. L. C., Yeong, M., Cruz-Morales, P., Abubucker, S., Roeters, A., Lokhorst, W., Fernandez Guerra, Antonio, Cappelini, L. T. D., Goering, A. W., Thomson, R. J., Metcalf, W. W., Kelleher, N. L., Barona-Gomez, F. & Medema, M. H., Jan 2020, In: Nature Chemical Biology. 16, 1, p. 60-68 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Linking Spatial and Temporal Dynamic of Bacterioplankton Communities With Ecological Strategies Across a Coastal Frontal Area

    Lemonnier, C., Perennou, M., Eveillard, D., Fernandez Guerra, Antonio, Leynaert, A., Marie, L., Morrison, H. G., Memery, L., Paillard, C. & Maignien, L., 2020, In: Frontiers in Marine Science. 7, 13 p., 376.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Meta-SourceTracker: application of Bayesian source tracking to shotgun metagenomics

    McGhee, J. J., Rawson, N., Bailey, B. A., Fernandez Guerra, Antonio, Sisk-Hackworth, L. & Kelley, S. T., 2020, In: PeerJ. 8, 18 p., 8783.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Verrucomicrobia use hundreds of enzymes to digest the algal polysaccharide fucoidan

    Sichert, A., Corzett, C. H., Schechter, M. S., Unfried, F., Markert, S., Becher, D., Fernandez Guerra, Antonio, Liebeke, M., Schweder, T., Polz, M. F. & Hehemann, J. H., 2020, In: Nature Microbiology. 5, p. 1026-1039

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. 2019

  23. Decoding the ocean's microbiological secrets for marine enzyme biodiscovery

    Ferrer, M., Mendez-Garcia, C., Bargiela, R., Chow, J., Alonso, S., Garcia-Moyano, A., Bjerga, G. E. K., Steen, I. H., Schwabe, T., Blom, C., Vester, J., Weckbecker, A., Shahgaldian, P., de Carvalho, C. C. C. R., Meskys, R., Zanaroli, G., Gloeckner, F. O., Fernandez-Guerra, A., Thambisetty, S., de la Calle, F. & 9 others, Golyshina, O. V., Yakimov, M. M., Jaeger, K., Yakunin, A. F., Streit, W. R., McMeel, O., Calewaert, J., Tonne, N. & Golyshin, P. N., 2019, In: FEMS Microbiology Letters. 366, 1

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. 2018

  25. Organic matter processing by microbial communities throughout the Atlantic water column as revealed by metaproteomics

    Bergauer, K., Fernandez Guerra, Antonio, Garcia, J. A. L., Sprenger, R. R., Stepanauskas, R., Pachiadaki, M. G., Jensen, O. N. & Herndl, G. J., 16 Jan 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 3, p. E400-E408 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  26. Determinants and Prediction of Esterase Substrate Promiscuity Patterns

    Martinez-Martinez, M., Coscolin, C., Santiago, G., Chow, J., Stogios, P. J., Bargiela, R., Gertler, C., Navarro-Fernandez, J., Bollinger, A., Thies, S., Mendez-Garcia, C., Popovic, A., Brown, G., Chernikova, T. N., Garcia-Moyano, A., Bjerga, G. E. K., Perez-Garcia, P., Hai, T., Del Pozo, M. V., Stokke, R. & 22 others, Steen, I. H., Cui, H., Xu, X., Nocek, B. P., Alcaide, M., Distaso, M., Mesa, V., Pelaez, A. I., Sanchez, J., Buchholz, P. C. F., Pleiss, J., Fernandez Guerra, Antonio, Gloeckner, F. O., Golyshina, O. V., Yakimov, M. M., Savchenko, A., Jaeger, K., Yakunin, A. F., Streit, W. R., Golyshin, P. N., Guallar, V. & Ferrer, M., Jan 2018, In: ACS chemical biology. 13, 1, p. 225-234 10 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Recurrent patterns of microdiversity in a temperate coastal marine environment

    Chafee, M., Fernandez Guerra, Antonio, Buttigieg, P. L., Gerdts, G., Eren, A. M., Teeling, H. & Amann, R. I., Jan 2018, In: ISME Journal. 12, 1, p. 237-252 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Molecular recognition of the beta-glucans laminarin and pustulan by a SusD-like glycan-binding protein of a marine Bacteroidetes

    Mystkowska, A. A., Robb, C., Vidal-Melgosa, S., Vanni, C., Fernandez Guerra, Antonio, Hoehne, M. & Hehemann, J., 2018, In: FEBS Journal. 285, 23, p. 4465-4481

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. 2017

  30. Analysis of phytoplankton assemblage structure in the Mediterranean Sea based on high-throughput sequencing of partial 18S rRNA sequences

    Penna, A., Casabianca, S., Fernandez Guerra, Antonio, Vernesi, C. & Scardi, M., Dec 2017, In: Marine Genomics. 36, p. 49-55 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  31. Geographic distribution at subspecies resolution level: closely related Rhodopirellula species in European coastal sediments

    Zure, Marina, Fernandez Guerra, Antonio, Munn, C. B. & Harder, J., Feb 2017, In: ISME Journal. 11, 2, p. 478-489 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  32. 2016

  33. BioVeL: a virtual laboratory for data analysis and modelling in biodiversity science and ecology

    Hardisty, A. R., Bacall, F., Beard, N., Balcazar-Vargas, M-P., Balech, B., Barcza, Z., Bourlat, S. J., De Giovanni, R., de Jong, Y., De Leo, F., Dobor, L., Donvito, G., Fellows, D., Fernandez Guerra, A., Ferreira, N., Fetyukova, Y., Fosso, B., Giddy, J., Goble, C., Guentsch, A. & 31 others, Haines, R., Ernst, V. H., Hettling, H., Hidy, D., Horvath, F., Ittzes, D., Ittzes, P., Jones, A., Kottmann, R., Kulawik, R., Leidenberger, S., Lyytikainen-Saarenmaa, P., Mathew, C., Morrison, N., Nenadic, A., de la Hidalga, A. N., Obst, M., Oostermeijer, G., Paymal, E., Pesole, G., Pinto, S., Poigne, A., Fernandez, F. Q., Santamaria, M., Saarenmaa, H., Sipos, G., Sylla, K., Tahtinen, M., Vicario, S., Vos, R. A. & BioVeL, B., 2016, In: BMC Ecology. 16, 16 p., 49.

    Research output: Contribution to journal › Journal article › Research › peer-review

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ID: 235125386