Antton Alberdi Estibaritz

Antton Alberdi Estibaritz

Associate Professor

ORCID: 0000-0002-2875-6446

Publication year:
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1 - 10 out of 48Page size: 10
  1. 2024
  2. Published

    A comparison of short-read, HiFi long-read, and hybrid strategies for genome-resolved metagenomics

    Eisenhofer Philipona, Raphael A, Nesme, J., Santos-Bay, Luisa, Koziol, Adam Leslie, Sørensen, Søren Johannes, Alberdi, Antton & Aizpurua Arrieta, Ostaizka, 2024, In: Microbiology Spectrum. 12, 4, 14 p., e03590-23.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. E-pub ahead of print

    Field and laboratory guidelines for reliable bioinformatic and statistical analysis of bacterial shotgun metagenomic data

    Aizpurua Arrieta, Ostaizka, Dunn, Rob, Hansen, Lars Hestbjerg, Gilbert, M Thomas P & Alberdi, Antton, 2024, (E-pub ahead of print) In: Critical Reviews in Biotechnology.

    Research output: Contribution to journal › Review › Research › peer-review

  4. 2023
  5. E-pub ahead of print

    DNA metabarcoding reveals seasonal changes in diet composition across four arthropod-eating lizard species (Phrynosomatidae: Sceloporus)

    Hernández, M., Hereira-Pacheco, S., Alberdi, Antton, De La Vega-Pérez, A. H. D., Estrada-Torres, A., Ancona, S. & Navarro-Noya, Y. E., 7 Aug 2023, (E-pub ahead of print) In: Integrative Zoology. 16 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    A pangenome graph reference of 30 chicken genomes allows genotyping of large and complex structural variants

    Rice, E. S., Alberdi, A., Alfieri, J., Athrey, G., Balacco, J. R., Bardou, P., Blackmon, H., Charles, M., Cheng, H. H., Fedrigo, O., Fiddaman, S. R., Formenti, G., Frantz, L. A. F., Gilbert, M. T. P., Hearn, C. J., Jarvis, E. D., Klopp, C., Marcos, S., Mason, A. S., Velez-Irizarry, D. & 2 others, Xu, L. & Warren, W. C., 2023, In: BMC Biology. 21, 17 p., 267.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    A simplified protocol for DNA extraction from FTA cards for faecal microbiome studies

    Botnen, A. B., Bjørnsen, Mads Bjørn, Alberdi, Antton, Gilbert, M Thomas P & Aizpurua Arrieta, Ostaizka, 2023, In: Heliyon. 9, 1, 10 p., e12861.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Published

    A species-level trait dataset of bats in Europe and beyond

    Froidevaux, J. S. P., Toshkova, N., Barbaro, L., Benítez-López, A., Kerbiriou, C., Le Viol, I., Pacifici, M., Santini, L., Stawski, C., Russo, D., Dekker, J., Alberdi, A., Amorim, F., Ancillotto, L., Barré, K., Bas, Y., Cantú-Salazar, L., Dechmann, D. K. N., Devaux, T., Eldegard, K. & 28 others, Fereidouni, S., Furmankiewicz, J., Hamidovic, D., Hill, D. L., Ibáñez, C., Julien, J. F., Juste, J., Kaňuch, P., Korine, C., Laforge, A., Legras, G., Leroux, C., Lesiński, G., Mariton, L., Marmet, J., Mata, V. A., Mifsud, C. M., Nistreanu, V., Novella-Fernandez, R., Rebelo, H., Roche, N., Roemer, C., Ruczyński, I., Sørås, R., Uhrin, M., Vella, A., Voigt, C. C. & Razgour, O., 2023, In: Scientific Data. 10, 13 p., 253.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Bacterial topography of the upper and lower respiratory tract in pigs

    Pirolo, Mattia, Espinosa-Gongora, C., Alberdi, Antton, Eisenhofer Philipona, Raphael A, Soverini, M., Eriksen, E. Ø., Pedersen, Ken Steen & Guardabassi, Luca, 2023, In: BMC Animal Microbiome. 5, 13 p., 5.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Impact of microbial genome completeness on metagenomic functional inference

    Eisenhofer Philipona, Raphael A, Larrañaga, Iñaki Odriozola & Alberdi, Antton, 2023, In: ISME communications. 3, 5 p., 12.

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    Mammals show distinct functional gut microbiome dynamics to identical series of environmental stressors

    Koziol, Adam Leslie, Larrañaga, Iñaki Odriozola, Leonard, Aoife Mary, Eisenhofer Philipona, Raphael A, José, C. S., Aizpurua Arrieta, Ostaizka & Alberdi, Antton, 2023, In: mBio. 14, 5, 17 p., e01606-23.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Unravelling animal–microbiota evolution on a chip

    Aizpurua Arrieta, Ostaizka, Blijleven, Kees, Trivedi, Urvish, Gilbert, M Thomas P & Alberdi, Antton, 2023, In: Trends in Microbiology. 31, 10, p. 995-1002 8 p.

    Research output: Contribution to journal › Review › Research › peer-review

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ID: 152300361