Antton Alberdi Estibaritz

Antton Alberdi Estibaritz

Associate Professor


  1. 2024
  2. Published

    A comparison of short-read, HiFi long-read, and hybrid strategies for genome-resolved metagenomics

    Eisenhofer Philipona, Raphael A, Nesme, J., Santos-Bay, Luisa, Koziol, Adam Leslie, Sørensen, Søren Johannes, Alberdi, Antton & Aizpurua Arrieta, Ostaizka, 2024, In: Microbiology Spectrum. 12, 4, 14 p., e03590-23.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Bat diversity boosts ecosystem services: Evidence from pine processionary moth predation

    Augusto, A. M., Raposeira, H., Horta, P., Mata, V. A., Aizpurua Arrieta, Ostaizka, Alberdi, Antton, Jones, G., Razgour, O., Santos, S. A. P., Russo, D. & Rebelo, H., 2024, In: Science of the Total Environment. 912, 10 p., 169387.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    DNA metabarcoding reveals seasonal changes in diet composition across four arthropod-eating lizard species (Phrynosomatidae: Sceloporus)

    Hernández, M., Hereira-Pacheco, S., Alberdi, Antton, De La Vega-Pérez, A. H. D., Estrada-Torres, A., Ancona, S. & Navarro-Noya, Y. E., 2024, In: Integrative Zoology. 19, 3, p. 480-495 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Field and laboratory guidelines for reliable bioinformatic and statistical analysis of bacterial shotgun metagenomic data

    Aizpurua Arrieta, Ostaizka, Dunn, Rob, Hansen, Lars Hestbjerg, Gilbert, M Thomas P & Alberdi, Antton, 2024, In: Critical Reviews in Biotechnology. 44, 6, p. 1164-1182

    Research output: Contribution to journalReviewResearchpeer-review

  6. E-pub ahead of print

    Going urban: variation in personality traits of an invasive species along an urbanization gradient

    Tranquillo, C., Santicchia, F., Romeo, Claudia Rosa, Bisi, F., Panzeri, M., Preatoni, D., Martinoli, A., Alberdi, Antton & Wauters, L. A., 2024, (E-pub ahead of print) In: Journal of Mammalogy.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Seasonal dietary changes relate to gut microbiota composition depending on the host species but do not correlate with gut microbiota diversity in arthropod-eating lizards

    Hernández, M., Ancona, S., Hereira-Pacheco, S., de la Vega-Pérez, A. H. D., Alberdi, Antton & Navarro-Noya, Y. E., 2024, In: Molecular Ecology. 33, 14, 15 p., e17426.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. 2023
  9. Published

    A pangenome graph reference of 30 chicken genomes allows genotyping of large and complex structural variants

    Rice, E. S., Alberdi, A., Alfieri, J., Athrey, G., Balacco, J. R., Bardou, P., Blackmon, H., Charles, M., Cheng, H. H., Fedrigo, O., Fiddaman, S. R., Formenti, G., Frantz, L. A. F., Gilbert, M. T. P., Hearn, C. J., Jarvis, E. D., Klopp, C., Marcos, S., Mason, A. S., Velez-Irizarry, D. & 2 others, Xu, L. & Warren, W. C., 2023, In: BMC Biology. 21, 17 p., 267.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    A simplified protocol for DNA extraction from FTA cards for faecal microbiome studies

    Botnen, A. B., Bjørnsen, Mads Bjørn, Alberdi, Antton, Gilbert, M Thomas P & Aizpurua Arrieta, Ostaizka, 2023, In: Heliyon. 9, 1, 10 p., e12861.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    A species-level trait dataset of bats in Europe and beyond

    Froidevaux, J. S. P., Toshkova, N., Barbaro, L., Benítez-López, A., Kerbiriou, C., Le Viol, I., Pacifici, M., Santini, L., Stawski, C., Russo, D., Dekker, J., Alberdi, A., Amorim, F., Ancillotto, L., Barré, K., Bas, Y., Cantú-Salazar, L., Dechmann, D. K. N., Devaux, T., Eldegard, K. & 28 others, Fereidouni, S., Furmankiewicz, J., Hamidovic, D., Hill, D. L., Ibáñez, C., Julien, J. F., Juste, J., Kaňuch, P., Korine, C., Laforge, A., Legras, G., Leroux, C., Lesiński, G., Mariton, L., Marmet, J., Mata, V. A., Mifsud, C. M., Nistreanu, V., Novella-Fernandez, R., Rebelo, H., Roche, N., Roemer, C., Ruczyński, I., Sørås, R., Uhrin, M., Vella, A., Voigt, C. C. & Razgour, O., 2023, In: Scientific Data. 10, 13 p., 253.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Bacterial topography of the upper and lower respiratory tract in pigs

    Pirolo, Mattia, Espinosa-Gongora, C., Alberdi, Antton, Eisenhofer Philipona, Raphael A, Soverini, M., Eriksen, Esben Østergaard, Pedersen, Ken Steen & Guardabassi, Luca, 2023, In: BMC Animal Microbiome. 5, 13 p., 5.

    Research output: Contribution to journalJournal articleResearchpeer-review

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ID: 152300361