Bent Petersen

Bent Petersen

Senior Researcher

ORCID: 0000-0002-2472-8317

Publication year:
All
26 - 50 out of 68Page size: 25
  1. 2020
  2. Published

    Evolutionary History, Genomic Adaptation to Toxic Diet, and Extinction of the Carolina Parakeet

    Gelabert, P., Sandoval-Velasco, M., Serres, A., de Manuel, M., Renom, P., Margaryan, A., Stiller, J., de-Dios, T., Fang, Q., Feng, S., Mañosa, S., Pacheco, G., Ferrando-Bernal, M., Shi, G., Hao, F., Chen, X., Petersen, B., Olsen, R-A., Navarro, A., Deng, Y. & 6 others, Dalén, L., Marquès-Bonet, T., KU, thw266, Antunes, A., Gilbert, M Thomas P & Lalueza-Fox, C., 2020, In: Current Biology. 30, 1, p. 108-114, e1-e5

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. Published

    Genomes of Pleistocene Siberian Wolves Uncover Multiple Extinct Wolf Lineages

    Ramos-Madrigal, J., Sinding, M-H. S., Carøe, C., Mak, S. S. T., Niemann, J., Samaniego Castruita, J. A., Fedorov, S., Kandyba, A., Germonpré, M., Bocherens, H., Feuerborn, T. R., Pitulko, V. V., Pavlova, E. Y., Nikolskiy, P. A., Kasparov, A. K., Ivanova, V. V., Larson, G., Frantz, L. A. F., Willerslev, E., Meldgaard, M. & 7 others, Petersen, Bent, Sicheritz-Pontén, Thomas, Bachmann, L., Wiig, Ø., Hansen, Anders Johannes, Gilbert, M Thomas P & Gopalakrishnan, Shyam, 2020, In: Current biology : CB. 31, p. 198-206

    Research output: Contribution to journal › Journal article › Research › peer-review

  4. Published

    The tuatara genome reveals ancient features of amniote evolution

    Gemmell, N. J., Rutherford, K., Prost, S., Tollis, M., Winter, D., Macey, J. R., Adelson, D. L., Suh, A., Bertozzi, T., Grau, J. H., Organ, C., Gardner, P. P., Muffato, M., Patricio, M., Billis, K., Martin, F. J., Flicek, P., Petersen, B., Kang, L., Michalak, P. & 31 others, Buckley, T. R., Wilson, M., Cheng, Y., Miller, H., Schott, R. K., Jordan, M. D., Newcomb, R. D., Arroyo, J. I., Valenzuela, N., Hore, T. A., Renart, J., Peona, V., Peart, C. R., Warmuth, V. M., Zeng, L., Kortschak, R. D., Raison, J. M., Zapata, V. V., Wu, Z., Santesmasses, D., Mariotti, M., Guigo, R., Rupp, S. M., Twort, V. G., Dussex, N., Taylor, H., Abe, H., Bond, D. M., Paterson, J. M., Mulcahy, D. G. & Ngatiwai Trust Board, N. T. B., 2020, In: Nature. 584, p. 403–409, +19 26 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. 2019
  6. Published

    Comparative analyses identify genomic features potentially involved in the evolution of birds-of-paradise

    Prost, S., Armstrong, E. E., Nylander, J., Thomas, G. W. C., Suh, A., Petersen, Bent, Dalen, L., Benz, B. W., Blom, M. P. K., Palkopoulou, E., Ericson, P. G. P. & Irestedt, M., 2019, In: GigaScience. 8, 5, 12 p., giz003.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Genomic analyses reveal an absence of contemporary introgressive admixture between fin whales and blue whales, despite known hybrids

    Westbury, Michael Vincent, Petersen, Bent & Lorenzen, Eline, 2019, In: PLoS ONE. 14, 9, 13 p., e0222004.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage

    Hendriksen, R. S., Munk, P., Njage, P., van Bunnik, B., McNally, L., Lukjancenko, O., Röder, T., Nieuwenhuijse, D., Pedersen, S. K., Kjeldgaard, J., Kaas, R. S., Clausen, P. T. L. C., Vogt, J. K., Leekitcharoenphon, P., van de Schans, M. G. M., Zuidema, T., de Roda Husman, A. M., Rasmussen, S., Petersen, B., Bego, A. & 108 others, Rees, C., Cassar, S., Coventry, K., Collignon, P., Allerberger, F., Rahube, T. O., Oliveira, G., Ivanov, I., Vuthy, Y., Sopheak, T., Yost, C. K., Ke, C., Zheng, H., Baisheng, L., Jiao, X., Donado-Godoy, P., Coulibaly, K. J., Jergović, M., Hrenovic, J., Karpíšková, R., Villacis, J. E., Legesse, M., Eguale, T., Heikinheimo, A., Malania, L., Nitsche, A., Brinkmann, A., Saba, C. K. S., Kocsis, B., Solymosi, N., Thorsteinsdottir, T. R., Hatha, A. M., Alebouyeh, M., Morris, D., Cormican, M., O’Connor, L., Moran-Gilad, J., Alba, P., Battisti, A., Shakenova, Z., Kiiyukia, C., Ng’eno, E., Raka, L., Avsejenko, J., Bērziņš, A., Bartkevics, V., Penny, C., Rajandas, H., Parimannan, S., Haber, M. V., Pal, P., Jeunen, G. J., Gemmell, N., Fashae, K., Holmstad, R., Hasan, R., Shakoor, S., Rojas, M. L. Z., Wasyl, D., Bosevska, G., Kochubovski, M., Radu, C., Gassama, A., Radosavljevic, V., Wuertz, S., Zuniga-Montanez, R., Tay, M. Y. F., Gavačová, D., Pastuchova, K., Truska, P., Trkov, M., Esterhuyse, K., Keddy, K., Cerdà-Cuéllar, M., Pathirage, S., Norrgren, L., Örn, S., Larsson, D. G. J., Heijden, T. V. D., Kumburu, H. H., Sanneh, B., Bidjada, P., Njanpop-Lafourcade, B. M., Nikiema-Pessinaba, S. C., Levent, B., Meschke, J. S., Beck, N. K., Van, C. D., Phuc, N. D., Tran, D. M. N., Kwenda, G., Tabo, D. A., Wester, A. L., Cuadros-Orellana, S., Amid, C., Cochrane, G., Sicheritz-Pontén, Thomas, Schmitt, H., Alvarez, J. R. M., Aidara-Kane, A., Pamp, S. J., Lund, O., Hald, T., Woolhouse, M., Koopmans, M. P., Vigre, H., Petersen, T. N. & Aarestrup, F. M., 2019, In: Nature Communications. 10, 1, 12 p., 1124.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    MobiSeq: De novo SNP discovery in model and non-model species through sequencing the flanking region of transposable elements

    Rey de la Iglesia, Alba, Gopalakrishan, S., Carøe, C., Alquezar-Planas, D. E., Nielsen, A. A., Röder, T., Pedersen, Lene Bruhn, Næsborg-Nielsen, C., Sinding, Mikkel Holger Strander, Rath, Martin Fredensborg, Li, Z., Petersen, Bent, Gilbert, M Thomas P, Bunce, M., Mourier, T. & Hansen, Anders Johannes, 2019, In: Molecular Ecology Resources. 19, 2, p. 512-525 14 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. Published

    Narwhal Genome Reveals Long-Term Low Genetic Diversity despite Current Large Abundance Size

    Westbury, Michael Vincent, Petersen, Bent, Garde, E., Heide-Jørgensen, M. P. & Lorenzen, Eline, 2019, In: iScience. 15, p. 592-599

    Research output: Contribution to journal › Journal article › Research › peer-review

  11. Published

    NetSurfP-2.0: improved prediction of protein structural features by integrated deep learning

    Klausen, M. S., Jespersen, M. C., Nielsen, H., Jensen, K. K., Jurtz, V. I., Sønderby, C. K., Sommer, M. O. A., Winther, Ole, Nielsen, M., Petersen, Bent & Marcatili, P., 2019, In: Proteins: Structure, Function and Bioinformatics. 87, 6, p. 520-527

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Palaeogenomic insights into the origins of French grapevine diversity

    Ramos Madrigal, Jazmin, Runge, Anne Kathrine Wiborg, Bouby, L., Lacombe, T., Samaniego Castruita, J. A., Adam-Blondon, A., Figueiral, I., Hallavant, C., Schaal, C., Töpfer, R., Petersen, Bent, Sicheritz-Pontén, T., This, P., Bacilieri, R., Gilbert, M Thomas P & Wales, N., 2019, In: Nature Plants. 5, 6, p. 595-603 9 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    The Genome and mRNA Transcriptome of the Cosmopolitan Calanoid Copepod Acartia tonsa Dana Improve the Understanding of Copepod Genome Size Evolution

    Jørgensen, T. S., Petersen, Bent, Petersen, H. C. B., Browne, Patrick Denis, Prost, S., Stillman, J. H., Hansen, Lars Hestbjerg & Hansen, B. W., 2019, In: Genome Biology and Evolution. 11, 5, p. 1440-1450

    Research output: Contribution to journal › Journal article › Research › peer-review

  14. Published

    The Whole Genome Sequence and mRNA Transcriptome of the Tropical Cyclopoid Copepod Apocyclops royi

    Jorgensen, T. S., Nielsen, B. L. H., Petersen, Bent, Browne, Patrick Denis, Hansen, B. W. & Hansen, Lars Hestbjerg, 2019, In: G3: Genes, Genomes, Genetics (Bethesda). 9, 5, p. 1295-1302

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. 2018
  16. Published

    Antibodies to intercellular adhesion molecule 1-binding Plasmodium falciparum erythrocyte membrane protein 1-DBLβ are biomarkers of protective immunity to malaria in a cohort of young children from Papua New Guinea

    Tessema, S. K., Utama, D., Chesnokov, O., Hodder, A. N., Lin, C. S., Harrison, G. L. A., Jespersen, Jakob Schmidt, Petersen, Bent, Tavul, L., Siba, P., Kwiatkowski, D., Lavstsen, Thomas, Hansen, D. S., Oleinikov, A. V., Mueller, I. & Barry, A. E., 1 Aug 2018, In: Infection and Immunity. 86, 8, p. 1-14 14 p., e00485-17.

    Research output: Contribution to journal › Journal article › Research › peer-review

  17. Genome analyses show strong selection on coloration, morphological and behavioral phenotypes in birds-of-paradise

    Prost, S., Armstrong, E. E., Nylander, J., Thomas, G. W. C., Suh, A., Petersen, Bent, Dalen, L., Benz, B. W., Blom, M. P. K., Palkopoulou, E., Ericson, P. G. P. & Irestedt, M., 16 May 2018, (Accepted/In press) In: bioRxiv.

    Research output: Contribution to journal › Journal article › Research › peer-review

  18. Published

    "Out of the Can": A Draft Genome Assembly, Liver Transcriptome, and Nutrigenomics of the European Sardine, Sardina pilchardus

    Machado, A. M., Tørresen, O. K., Kabeya, N., Couto, A., Petersen, Bent, Felicio, M., Campos, P. F., Fonseca, E., Bandarra, N., Lopes-Marques, M., Ferraz, R., Ruivo, R., Fonseca, M. M., Jentoft, S., Monroig, Ó., Rodrigues da Fonseca, Rute Andreia & Castro, L. F. C., 2018, In: Genes. 9, 10, p. 1-13 485.

    Research output: Contribution to journal › Journal article › Research › peer-review

  19. Published

    Accurate genotyping across variant classes and lengths using variant graphs

    Sibbesen, Jonas Andreas, Maretty, L., Krogh, Anders, Petersen, Bent, Sibbesen, Jonas Andreas, Liu, S., Have, C. T., Bork-Jensen, J., Guo, X., Hansen, Torben, Krogh, Anders, Sørensen, Thorkild I.A., Pedersen, Oluf Borbye, Wang, J. & Brunak, Søren, 2018, In: Nature Genetics. 50, p. 1054-1059 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  20. Published

    Benchmarking the HLA typing performance of Polysolver and Optitype in 50 Danish parental trios

    Matey-Hernandez, M. L., Danish Pan Genome Consortium, D. P. G. C., Brunak, Søren, Izarzugaza, J. M. G., Sørensen, L. M., Petersen, Bent, Sibbesen, Jonas Andreas, Liu, S., Belling, K. G., Have, C. T., Bork-Jensen, J., Sun, J., Hansen, Torben, Krogh, Anders, Sørensen, Thorkild I.A., Pedersen, Oluf Borbye, Wang, J., Eiberg, Hans Rudolf Lytchoff & Kristiansen, Karsten, 2018, In: BMC Bioinformatics. 19, p. 1-12 239.

    Research output: Contribution to journal › Journal article › Research › peer-review

  21. Published

    Improved de novo genomic assembly for the domestic donkey

    Renaud, Gabriel, Petersen, Bent, Seguin-orlando, A., Bertelsen, Mads Frost, Waller, A., Newton, R., Paillot, R., Bryant, N., Vaudin, M., Librado, P. & Orlando, L., 2018, In: Science Advances. 4, 4, eaaq0392.

    Research output: Contribution to journal › Journal article › Research › peer-review

  22. Improved ontology for eukaryotic single-exon coding sequences in biological databases

    Jorquera, R., González, C., Clausen, P. T. L. C., Petersen, Bent & Holmes, D. S., 2018, In: Database: The Journal of Biological Databases and Curation. 2018, 6 p., bay089.

    Research output: Contribution to journal › Journal article › Research › peer-review

  23. Published

    Interspecific Gene Flow Shaped the Evolution of the Genus Canis

    Gopalakrishnan, S., Sinding, M. H. S., Ramos-Madrigal, J., Niemann, J., Samaniego Castruita, J. A., Vieira, F. G., Carøe, C., Montero, M. D. M., Kuderna, L., Serres, A., González-Basallote, V. M., Liu, Y. H., Wang, G. D., Marques-Bonet, T., Mirarab, S., Fernandes, C., Gaubert, P., Koepfli, K. P., Budd, J., Rueness, E. K. & 7 others, Heide-Jørgensen, M. P., Petersen, Bent, Sicheritz-Ponten, T., Bachmann, L., Wiig, Ø., Hansen, Anders Johannes & Gilbert, M. T. P., 2018, In: Current Biology. 28, 21, p. 3441-3449

    Research output: Contribution to journal › Journal article › Research › peer-review

  24. Published

    Population genomics of grey wolves and wolf-like canids in North America

    Sinding, Mikkel Holger Strander, Gopalakrishan, S., Vieira, Filipe Garrett, Samaniego Castruita, J. A., Raundrup, K., Heide-Jørgensen, M. P., Meldgaard, Morten, Petersen, Bent, Sicheritz-Ponten, T., Mikkelsen, J. B., Marquard-Petersen, U., Dietz, R., Sonne, C., Dalén, L., Bachmann, L., Wiig, Ø., Hansen, Anders Johannes & Gilbert, M Thomas P, 2018, In: PLOS Genetics. 14, 11, 23 p., e1007745.

    Research output: Contribution to journal › Journal article › Research › peer-review

  25. 2017
  26. Published

    Assembly and analysis of 100 full MHC haplotypes from the Danish population

    Jensen, J. M., Villesen, P., Friborg, R. M., Mailund, T., Besenbacher, S., Sørensen, L. M., Petersen, B., Sibbesen, J. A., Liu, S., Skov, L., Belling, K. G., Have, C. T., Izarzugaza, J. M. G., Grosjean, M., Bork-Jensen, J., Grove, J., Als, T. D., Huang, S., Chang, Y., Xu, R. & 39 others, Ye, W., Rao, J., Guo, X., Sun, J., Cao, H., Ye, C., Beusekom, J. V., Espeseth, T., Flindt, E., Halager, A. E., Hellard, S. L., Hultman, C. M., Lescai, F., Li, S., Lund, O., Løngren, P., Matey-Hernandez, M. L., Mors, O., Pedersen, C. N. S., Sicheritz-Pontén, T., Sullivan, P., Syed, A., Westergaard, D., Yadav, R., Li, N., Xu, X., Hansen, Torben, Bolund, L., Krogh, Anders, Sørensen, Thorkild I.A., Pedersen, Oluf Borbye, Gupta, R., Rasmussen, Simon, Børglum, A. D., Wang, J., Eiberg, Hans Rudolf Lytchoff, Kristiansen, Karsten, Brunak, Søren & Schierup, M. H., Sep 2017, In: Genome Research. 27, 9, p. 1597-1607 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  27. Published

    Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing

    Mak, Sarah Siu Tze, Gopalakrishnan, Shyam, Carøe, C., Geng, C., Liu, Shanlin, Sinding, Mikkel Holger Strander, Kuderna, L. F. K., Zhang, W., Fu, S., Vieira, Filipe Garrett, Germonpré, M., Bocherens, H., Fedorov, S., Petersen, Bent, Sicheritz-Pontén, T., Marques-Bonet, T., KU, thw266, Jiang, H. & Gilbert, M Thomas P, Aug 2017, In: GigaScience. 6, 8, p. 1–13 13 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  28. Published

    Analysis of 62 hybrid assembled human Y chromosomes exposes rapid structural changes and high rates of gene conversion

    Skov, L., Schierup, M. H., Danish Pan Genome Consortium, D. P. G. C., Sørensen, L. M., Petersen, Bent, Sibbesen, Jonas Andreas, Liu, S., Belling, K. G., Have, C. T., Bork-Jensen, J., Hansen, Torben, Krogh, Anders, Sørensen, Thorkild I.A., Pedersen, Oluf Borbye, Rasmussen, Simon, Kristiansen, Karsten & Brunak, Søren, 2017, In: PLOS Genetics. 13, 8, p. e1006834

    Research output: Contribution to journal › Journal article › Research › peer-review

  29. Complete mitochondrial genome of the Oriental Hornet, Vespa orientalis F. (Hymenoptera: Vespidae)

    Haddad, N. J., Al-Nakeeb, K. A. A., Petersen, Bent, Dalén, L., Blom, N. & Sicheritz-Pontén, Thomas, 2017, In: Mitochondrial DNA Part B: Resources. 2, 1, p. 139-140 2 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

Previous 1 2 3 Next

ID: 203154234