Fernando Racimo

Fernando Racimo

Associate Professor

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    ORCID: 0000-0002-5025-2607

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    1. Published

      The dental proteome of Homo antecessor: {with Author Correction]

      Welker, F., Ramos-Madrigal, J., Gutenbrunner, P., Mackie, M., Tiwary, S., Rakownikow Jersie-Christensen, R., Chiva, C., Dickinson, M. R., Kuhlwilm, M., de Manuel, M., Gelabert, P., Martinón-Torres, M., Margvelashvili, A., Arsuaga, J. L., Carbonell, E., Marques-Bonet, T., Penkman, K., Sabidó, E., Cox, J., Olsen, J. V. & 6 others, Lordkipanidze, D., Racimo, Fernando, Lalueza-Fox, C., Bermúdez de Castro, J. M., Willerslev, Eske & Cappellini, Enrico, Apr 2020, In: Nature. 580, 7802, p. 235-238 4 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    2. Published

      Late Quaternary dynamics of Arctic biota from ancient environmental genomics: [+ Correction]

      Wang, Y., Pedersen, M. W., Alsos, I. G., De Sanctis, B., Racimo, F., Prohaska, A., Coissac, E., Owens, H. L., Merkel, M. K. F., Fernandez-Guerra, A., Rouillard, A., Lammers, Y., Alberti, A., Denoeud, F., Money, D., Ruter, A. H., McColl, H., Larsen, N. K., Cherezova, A. A., Edwards, M. E. & 30 others, Fedorov, G. B., Haile, James Seymour, Orlando, L., Vinner, Lasse, Korneliussen, Thorfinn Sand, Beilman, D. W., Bjørk, Anders Anker, Cao, Jialu, Dockter, C., Esdale, J., Gusarova, G., Kjeldsen, Kristian Kjellerup, Mangerud, J., Rasic, J. T., Skadhauge, B., Svendsen, J. I., Tikhonov, A., Wincker, P., Xing, Y., Zhang, Y., Froese, D. G., Rahbek, Carsten, Nogues, David Bravo, Holden, P. B., Edwards, N. R., Durbin, R., Meltzer, D. J., Kjær, Kurt H., Möller, P. & Willerslev, Eske, 2021, In: Nature. 600, 7887, p. 86–92 19 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      Reply to: When did mammoths go extinct?

      Wang, Y., Prohaska, A., Dong, H., Alberti, A., Alsos, I. G., Beilman, D. W., Bjørk, A. A., Cao, J., Cherezova, A. A., Coissac, E., De Sanctis, B., Denoeud, F., Dockter, C., Durbin, R., Edwards, M. E., Edwards, N. R., Esdale, J., Fedorov, G. B., Fernandez-Guerra, A., Froese, D. G. & 32 others, Gusarova, G., Haile, James Seymour, Holden, P. B., Kjeldsen, Kristian Kjellerup, Kjær, Kurt H., Korneliussen, Thorfinn Sand, Lammers, Y., Larsen, Nicolaj Krog, Macleod, R., Mangerud, J., McColl, Hugh, Merkel, M. K. F., Money, D., Möller, P., Nogues, David Bravo, Orlando, L., Owens, Hannah Lois, Pedersen, Mikkel Winther, Racimo, Fernando, Rahbek, Carsten, Rasic, J. T., Rouillard, Alexandra, Ruter, Anthony Henry, Skadhauge, B., Svendsen, J. I., Tikhonov, A., Vinner, Lasse, Wincker, P., Xing, Y., Zhang, Y., Meltzer, D. J. & Willerslev, Eske, 2022, In: Nature. 612, 7938, p. E4-E6

      Research output: Contribution to journal › Comment/debate › Research › peer-review

    4. Joint Estimation of Relatedness Coefficients and Allele Frequencies from Ancient Samples

      Theunert, C., Racimo, Fernando & Slatkin, M., 2017, In: Genetics (Print). 206, 2, p. 1025-1035 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      Identifying loci under positive selection in complex population histories

      Refoyo Martínez, Alba, Rodrigues da Fonseca, Rute Andreia, Halldórsdóttir, K., Árnason, E., Mailund, T. & Racimo, Fernando, 2019, In: Genome Research. 29, 9, p. 1506-1520

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      How robust are cross-population signatures of polygenic adaptation in humans?

      Refoyo Martínez, Alba, Liu, S., Jørgensen, A. M., Jin, X., Albrechtsen, Anders, Martin, A. R. & Racimo, Fernando, 2021, In: Peer Community Journal. 1, 54 p., e22.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      A match made in the Anthropocene: human-mediated adaptive introgression across a speciation continuum

      Racimo, Fernando, 2022, In: Peer Community In Evolutionary Biology. 2022, 4 p., 100149.

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      Ethical Publishing: How Do We Get There?

      Racimo, Fernando, Galtier, N., De Herde, V., Bonn, N. A., Phillips, B., Guillemaud, T. & Bourget, D., 2022, In: Philosophy, Theory, and Practice in Biology. 14, 22 p., 15.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Archaic adaptive introgression in TBX15/WARS2

      Racimo, Fernando, Gokhman, D., Fumagalli, M., Ko, A., Hansen, Torben, Moltke, Ida, Albrechtsen, Anders, Carmel, L., Huerta-Sánchez, E. & Nielsen, Rasmus, 2017, In: Molecular Biology and Evolution. 34, 3, p. 509-524 16 p., msw283.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Detecting Polygenic Adaptation in Admixture Graphs

      Racimo, Fernando, Berg, J. J. & Pickrell, J. K., Apr 2018, In: Genetics. 208, 4, p. 1565-1584 20 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. Published

      Point of View: The biospheric emergency calls for scientists to change tactics

      Racimo, Fernando, Valentini, E., Rijo De León, G., Santos, T. L., Norberg, A., Atmore, L. M., Murray, M., Hakala, S. M., Appel Olsen, F., Gardner, C. & Halder, J. B., 2022, In: eLife. 11, 15 p., e83292.

      Research output: Contribution to journal › Journal article › Research › peer-review

    12. Published

      Beyond broad strokes: sociocultural insights from the study of ancient genomes

      Racimo, Fernando, Sikora, Martin, Vander Linden, M., Schroeder, Hannes & Lalueza-Fox, C., 2020, In: Nature Reviews Genetics. 21, p. 355-366 1398.

      Research output: Contribution to journal › Review › Research › peer-review

    13. Published

      The spatiotemporal spread of human migrations during the European Holocene

      Racimo, Fernando, Woodbridge, J., Fyfe, R. M., Sikora, Martin, Sjogren, K., Kristiansen, K. & Vander Linden, M., 2020, In: Proceedings of the National Academy of Sciences of the United States of America. 117, 16, p. 8989-9000 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    14. Evidence for archaic adaptive introgression in humans

      Racimo, Fernando, Sankararaman, S., Nielsen, Rasmus & Huerta-Sánchez, E., 18 May 2015, In: Nature Reviews Genetics. 16, 6, p. 359-371 13 p.

      Research output: Contribution to journal › Review › Research › peer-review

    15. Published

      Human Disease Variation in the Light of Population Genomics

      Prohaska, Ana, Racimo, Fernando, Schork, A. J., Sikora, Martin, Stern, A. J., Ilardo, M., Allentoft, Morten Erik, Folkersen, L., Buil, A., Moreno Mayar, J. Víctor, Korneliussen, Thorfinn Sand, Geschwind, D., Ingason, A., Werge, Thomas, Nielsen, Rasmus & Willerslev, Eske, 2019, In: Cell. 177, 1, p. 115-131 17 p.

      Research output: Contribution to journal › Review › Research › peer-review

    16. Deeply divergent archaic mitochondrial genome provides lower time boundary for African gene flow into Neanderthals

      Posth, C., Wissing, C., Kitagawa, K., Pagani, L., van Holstein, L., Racimo, Fernando, Wehrberger, K., Conard, N. J., Kind, C. J., Bocherens, H. & Krause, J., 2017, In: Nature Communications. 8, 9 p., 16046.

      Research output: Contribution to journal › Journal article › Research › peer-review

    17. Published

      slendr: a framework for spatio-temporal population genomic simulations on geographic landscapes

      Petr, Martin, Haller, B. C., Ralph, P. L. & Racimo, Fernando, 2022, bioRxiv, 27 p.

      Research output: Working paper › Preprint › Research

    18. Published

      PaleoProPhyler: a reproducible pipeline for phylogenetic inference using ancient proteins

      Patramanis, Ioannis, Ramos Madrigal, Jazmin, Cappellini, Enrico & Racimo, Fernando, 2022, bioRxiv, 6 p.

      Research output: Working paper › Preprint › Research

    19. Published

      Modeling the spatiotemporal spread of beneficial alleles using ancient genomes

      Muktupavela, Rasa Audange, Petr, Martin, Ségurel, L., Korneliussen, Thorfinn Sand, Novembre, J. & Racimo, Fernando, 2022, In: eLife. 11, 33 p., e73767.

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. Published

      Early human dispersals within the Americas

      Moreno-Mayar, J. V., Vinner, L., de Barros Damgaard, P., de la Fuente, C., Allentoft, M. E., Vimala, T., Racimo, F., Rasmussen, S., Margaryan, A., Iraeta Orbegozo, M., Mylopotamitaki, D., Alexandersen, V., Primeau, C., Gregersen, K., Hansen, K. L., Lynnerup, N., Kjær, K., Schroeder, H., Malaspinas, A. S., Sikora, M. & 2 others, Nielsen, Rasmus & Willerslev, Eske, 7 Dec 2018, In: Science (New York, N.Y.). 362, 6419, p. 1, 1-11 12 p., eaav2621.

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Published

      Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture

      Meadows, J. R. S., Kidd, J. M., Wang, G. D., Parker, H. G., Schall, P. Z., Bianchi, M., Christmas, M. J., Bougiouri, K., Buckley, R. M., Hitte, C., Nguyen, A. K., Wang, C., Jagannathan, V., Niskanen, J. E., Frantz, L. A. F., Arumilli, M., Hundi, S., Lindblad-Toh, K., Ginja, C., Agustina, K. K. & 28 others, André, C., Boyko, A. R., Davis, B. W., Drögemüller, M., Feng, X., Gkagkavouzis, K., Iliopoulos, G., Harris, A. C., Hytönen, M. K., Kalthoff, D. C., Liu, Y., Lymberakis, P., Poulakakis, N., Pires, A. E., Racimo, Fernando, Ramos-Almodovar, F., Savolainen, P., Venetsani, S., Tammen, I., Triantafyllidis, A., vonHoldt, B., Wayne, R. K., Larson, G., Nicholas, F. W., Lohi, H., Leeb, T., Zhang, Y. & Ostrander, E. A., 2023, In: Genome Biology. 24, 41 p., 187.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Published

      The prehistoric peopling of Southeast Asia

      McColl, H., Racimo, F., Vinner, L., Demeter, F. P. M., Gakuhari, T., Moreno Mayar, J. V., van Driem, G., Gram Wilken, U., Seguin-Orlando, A., de la Fuente Castro, C. P., Wasef, S., Shoocongdej, R., Souksavatdy, V., Sayavongkhamdy, T., Saidin, M. M., Allentoft, M. E., Sato, T., Malaspinas, A-S., Aghakhanian, F. A., Korneliussen, T. S. & 46 others, Prohaska, Ana, Margaryan, Ashot, Damgaard, P. D. B., Kaewsutthi, S., Lertrit, P., Nguyen, T. M. H., Hung, H., Minh Tran, T., Nghia Truong, H., Nguyen, G. H., Shahidan, S., Wiradnyana, K., Matsumae, H., Shigehara, N., Yoneda, M., Ishida, H., Masuyama, T., Yamada, Y., Tajima, A., Shibata, H., Toyoda, A., Hanihara, T., Nakagome, S., Deviese, T., Bacon, A., Duringer, P., Ponche, J., Shackelford, L., Patole-Edoumba, E., Nguyen, A. T., Bellina-Pryce, B., Galipaud, J., Kinaston, R., Buckley, H., Pottier, C., Rasmussen, Simon, Higham, T., Foley, R. A., Lahr, M. M., Orlando, L., Sikora, Martin, Phipps, M. E., Oota, H., Higham, C., Lambert, D. M. & Willerslev, Eske, 6 Jul 2018, In: Science (New York, N.Y.). 361, 6397, p. 88-92 5 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    23. Published

      Population genomics of the Viking world: [incl. correction]

      Margaryan, A., Lawson, D. J., Sikora, M., Racimo, F., Rasmussen, S., Moltke, I., Cassidy, L. M., Jørsboe, E., Ingason, A., Pedersen, M. W., Korneliussen, T., Wilhelmson, H., Buś, M. M., de Barros Damgaard, P., Martiniano, R., Renaud, G., Bhérer, C., Moreno-Mayar, J. V., Fotakis, A. K., Allen, M. & 30 others, Allmäe, R., Molak, M., Cappellini, Enrico, Scorrano, Gabriele, McColl, Hugh, Buzhilova, A., Fox, A., Albrechtsen, Anders, Schütz, B., Skar, B., Arcini, C., Lundstrøm, I., Cheng, J., Stenderup, Jesper Tandberg, Iversen, K. H., Arge, S. V., Ellingvåg, S., Orlando, L., Pentz, P., Jessen, M. D., Pedersen, A., Jørkov, M L S, Lynnerup, Niels, Gilbert, M Thomas P, Allentoft, Morten Erik, Sindbæk, S. M., Kristiansen, K., Nielsen, Rasmus, Werge, Thomas & Willerslev, Eske, 2020, In: Nature. 585, 7825, p. 390-396 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    24. Published

      The feasibility of palaeoproteomics for studying ancient hominins from South Africa

      Madupe, Palesa Petunia, Hlazo, N., Ruther, P. L., Mackie, Meaghan, Welker, Frido, Ramos Madrigal, Jazmin, Patramanis, Ioannis, Racimo, Fernando, Schroeder, L., Olsen, Jesper Velgaard, Ackermann, R. R. & Cappellini, Enrico, 2022, In: American journal of biological anthropology. 177, S73, p. 112 1 p.

      Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

    25. Published

      Ancient dolphin genomes reveal rapid repeated adaptation to coastal waters

      Louis, Marie Georgette Yolande J, Korlević, P., Nykänen, M., Archer, F., Berrow, S., Brownlow, A., Lorenzen, Eline, O'Brien, J., Post, K., Racimo, Fernando, Rogan, E., Rosel, P. E., Sinding, Mikkel Holger Strander, van der Es, H., Wales, N., Fontaine, M. C., Gaggiotti, O. E. & Foote, A. D., 2023, In: Nature Communications. 14, 13 p., 4020.

      Research output: Contribution to journal › Journal article › Research › peer-review

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    ID: 182564616