Filipe Jorge Garrett Vieira
Research Consultant
- 2018
- Published
BpWrapper: BioPerl-based sequence and tree utilities for rapid prototyping of bioinformatics pipelines
Hernandez, Y., Bernstein, R., Pagan, P., Vargas, L., McCaig, W., Ramrattan, G., Akther, S., Larracuente, A., Di, L., Vieira, Filipe Garrett & Qiu, W., 2 Mar 2018, In: B M C Bioinformatics. 19, 7 p., 76.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Identification of transcription factor genes involved in anthocyanin biosynthesis in carrot (Daucus carota L.) using RNA-Seq
Kodama, M., Brinch-pedersen, H., Sharma, S., Holme, I. B., Joernsgaard, B., Dzhanfezova, T., Amby, Daniel Buchvaldt, Vieira, Filipe Garrett, Liu, Shanlin & Gilbert, M. T. P., 2018, In: BMC Genomics. 19, 13 p., 811.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interspecific Gene Flow Shaped the Evolution of the Genus Canis
Gopalakrishnan, S., Sinding, M. H. S., Ramos-Madrigal, J., Niemann, J., Samaniego Castruita, J. A., Vieira, F. G., Carøe, C., Montero, M. D. M., Kuderna, L., Serres, A., González-Basallote, V. M., Liu, Y. H., Wang, G. D., Marques-Bonet, T., Mirarab, S., Fernandes, C., Gaubert, P., Koepfli, K. P., Budd, J., Rueness, E. K. & 7 others, , 2018, In: Current Biology. 28, 21, p. 3441-3449Research output: Contribution to journal › Journal article › Research › peer-review
- Published
No longer locally extinct? Tracing the origins of a lion (Panthera leo) living in Gabon
Barnett, R., Sinding, M. S., Vieira, Filipe Garrett, Mendoza, M. L. Z., Bonnet, M., Araldi, A., Kienast, I., Zambarda, A., Yamaguchi, N., Henschel, P. & Gilbert, M Thomas P, 2018, In: Conservation Genetics. 19, 3, p. 611-618 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Population genomics of grey wolves and wolf-like canids in North America
Sinding, Mikkel Holger Strander, Gopalakrishan, S., Vieira, Filipe Garrett, Samaniego Castruita, J. A., Raundrup, K., Heide-Jørgensen, M. P., Meldgaard, Morten, Petersen, Bent, Sicheritz-Ponten, T., Mikkelsen, J. B., Marquard-Petersen, U., Dietz, R., Sonne, C., Dalén, L., Bachmann, L., Wiig, Ø., Hansen, Anders Johannes & Gilbert, M Thomas P, 2018, In: PLOS Genetics. 14, 11, 23 p., e1007745.Research output: Contribution to journal › Journal article › Research › peer-review
- 2017
- Published
Genomic and proteomic identification of Late Holocene remains: setting baselines for Black Sea odontocetes
Biard, V., Gol'din, P., Gladilina, E., Vishnyakova, K., McGrath, K., Vieira, Filipe Garrett, Wales, N., Fontaine, M. C., Speller, C. & Olsen, Morten Tange, Oct 2017, In: Journal of Archaeological Science: Reports. 15, p. 262-271 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Unmatched DNA preservation prove arctic hare and sheep wool in Norse Greenlandic textile from “The Farm Beneath the Sand”
Sinding, Mikkel Holger Strander, Vieira, Filipe Garrett & Smith, M. H., 1 Aug 2017, In: Journal of Archaeological Science: Reports. 14, p. 603-608 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing
Mak, Sarah Siu Tze, Gopalakrishnan, Shyam, Carøe, C., Geng, C., Liu, Shanlin, Sinding, Mikkel Holger Strander, Kuderna, L. F. K., Zhang, W., Fu, S., Vieira, Filipe Garrett, Germonpré, M., Bocherens, H., Fedorov, S., Petersen, Bent, Sicheritz-Pontén, T., Marques-Bonet, T., KU, thw266, Jiang, H. & Gilbert, M Thomas P, Aug 2017, In: GigaScience. 6, 8, p. 1–13 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Asian wild rice is a hybrid swarm with extensive gene flow and feralization from domesticated rice
Wang, H., Vieira, Filipe Garrett, Crawford, J. E., Chu, C. & Nielsen, R., Jun 2017, In: Genome Research. 27, 6, p. 1029-1038 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterizing restriction enzyme-associated loci in historic ragweed (Ambrosia artemisiifolia) voucher specimens using custom-designed RNA probes
Sanchez Barreiro, F., Vieira, Filipe Garrett, Martin, M. D., Haile, James Seymour, Gilbert, M Thomas P & Wales, N., 2017, In: Molecular Ecology Resources. 17, 2, p. 209-220 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 105377460
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Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing
Research output: Contribution to journal › Journal article › Research › peer-review
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284
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Genomic insights into the Ixodes scapularis tick vector of Lyme disease
Research output: Contribution to journal › Journal article › Research › peer-review
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256
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Asian wild rice is a hybrid swarm with extensive gene flow and feralization from domesticated rice
Research output: Contribution to journal › Journal article › Research › peer-review
Published