Jazmin Ramos Madrigal
Assistant Professor
Section for Hologenomics
Øster Farimagsgade 5
1353 København K
- 2024
- E-pub ahead of print
Deep-time phylogenetic inference by paleoproteomic analysis of dental enamel
Taurozzi, Alberto John, Rüther, P. L., Patramanis, Ioannis, Koenig, Claire, Paterson, Ryan Sinclair, Madupe, Palesa Petunia, Harking, F. S., Welker, Frido, Mackie, Meaghan, Ramos Madrigal, Jazmin, Olsen, Jesper Velgaard & Cappellini, Enrico, 2024, (E-pub ahead of print) In: Nature Protocols. 38 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2023
- Published
Ancient DNA from a lost Negev Highlands desert grape reveals a Late Antiquity wine lineage
Cohen, P., Bacilieri, R., Ramos Madrigal, Jazmin, Privman, E., Boaretto, E., Weber, A., Fuks, D., Weiss, E., Erickson-Gini, T., Bucking, S., Tepper, Y., Cvikel, D., Schmidt, J., Gilbert, M Thomas P, Wales, N., Bar-Oz, G. & Meiri, M., 2023, In: PNAS. 120, 17, 8 p., e2213563120.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conservation implications of elucidating the Korean wolf taxonomic ambiguity through whole-genome sequencing
Hernández-Alonso, G., Ramos-Madrigal, J., Sun, X., Scharff-Olsen, C. H., Sinding, M. H. S., Martins, N. F., Ciucani, M. M., Mak, S. S. T., Lanigan, L. T., Clausen, C. G., Bhak, J., Jeon, S., Kim, C., Eo, K. Y., Cho, S. H., Boldgiv, B., Gantulga, G., Unudbayasgalan, Z., Kosintsev, P. A., Stenøien, H. K. & 2 others, , 2023, In: Ecology and Evolution. 13, 8, 15 p., e10404.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Proteomic identification of beer brewing products in the ground layer of Danish Golden Age paintings
Di Gianvincenzo, Fabiana, Andersen, C. K., Filtenborg, T., Mackie, Meaghan, Ernst, M., Ramos Madrigal, Jazmin, Olsen, Jesper Velgaard, Wadum, J. & Cappellini, Enrico, 2023, In: Science Advances. 9, 21, 13 p., eade7686.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Redefining the Evolutionary History of the Rock Dove, Columba livia, Using Whole Genome Sequences
Hernández Alonso, Germán, Ramos Madrigal, Jazmin, van Grouw, H., Ciucani, Marta Maria, Cavill, Emily Louisa, Sinding, Mikkel Holger Strander, Gopalakrishnan, Shyam, Antunes Pacheco, George & Gilbert, M Thomas P, 2023, In: Molecular Biology and Evolution. 40, 11, 17 p., msad243.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The ancestry and geographical origins of St Helena's liberated Africans
Sandoval-Velasco, Marcela, Jagadeesan, A., Ramos Madrigal, Jazmin, Ávila-Arcos, M. C., Fortes-Lima, C. A., Watson, J., Johannesdóttir, E., Cruz-Dávalos, D. I., Gopalakrishnan, Shyam, Moreno Mayar, J. Víctor, Niemann, Jonas, Renaud, G., Brown, K. A. R., Bennett, H., Pearson, A., Helgason, A., Gilbert, M Thomas P & Schroeder, Hannes, 2023, In: American Journal of Human Genetics. 110, 9, p. 1590-1599 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The extinct Sicilian wolf shows a complex history of isolation and admixture with ancient dogs
Ciucani, M. M., Ramos-Madrigal, J., Hernández-Alonso, G., Carmagnini, A., Aninta, S. G., Sun, X., Scharff-Olsen, C. H., Lanigan, L. T., Fracasso, I., Clausen, C. G., Aspi, J., Kojola, I., Baltrūnaitė, L., Balčiauskas, L., Moore, J., Åkesson, M., Saarma, U., Hindrikson, M., Hulva, P., Bolfíková, B. Č. & 19 others, , 2023, In: iScience. 26, 8, 22 p., 107307.Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
Differential expression profiling of heat stressed tardigrades reveals major shift in the transcriptome
Neves, R. C., Møbjerg, A., Kodama, M., Ramos Madrigal, Jazmin, Gilbert, M Thomas P & Møbjerg, Nadja, 2022, In: Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology. 267, 7 p., 111169.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Extreme freeze-tolerance in cryophilic tardigrades relies on controlled ice formation but does not involve significant change in transcription: [Corrigendum]
Møbjerg, A., Kodama, M., Ramos Madrigal, Jazmin, Neves, R. C., Jørgensen, Aslak, Schiøtt, M., Gilbert, M Thomas P & Møbjerg, Nadja, 2022, In: Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology. 271, 8 p., 111245.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Grey wolf genomic history reveals a dual ancestry of dogs
Bergström, A., Stanton, D. W. G., Taron, U. H., Frantz, L., Sinding, M. H. S., Ersmark, E., Pfrengle, S., Cassatt-Johnstone, M., Lebrasseur, O., Girdland-Flink, L., Fernandes, D. M., Ollivier, M., Speidel, L., Gopalakrishnan, S., Westbury, M. V., Ramos-Madrigal, J., Feuerborn, T. R., Reiter, E., Gretzinger, J., Münzel, S. C. & 61 others, , 2022, In: Nature. 607, 7918, p. 313-320Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rhizosphere bacterial communities differ among traditional maize landraces
Lund, M., Rasmussen, Jacob Agerbo, Ramos Madrigal, Jazmin, Sawers, R., Gilbert, M Thomas P & Barnes, Christopher James, 2022, In: Environmental DNA. 4, 6, p. 1241-1249 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The feasibility of palaeoproteomics for studying ancient hominins from South Africa
Madupe, Palesa Petunia, Hlazo, N., Ruther, P. L., Mackie, Meaghan, Welker, Frido, Ramos Madrigal, Jazmin, Patramanis, Ioannis, Racimo, Fernando, Schroeder, L., Olsen, Jesper Velgaard, Ackermann, R. R. & Cappellini, Enrico, 2022, In: American journal of biological anthropology. 177, S73, p. 112 1 p.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Unraveling Signatures of Local Adaptation among Indigenous Groups from Mexico
García-Ortiz, H., Barajas-Olmos, F., Contreras-Cubas, C., Reynolds, A. W., Flores-Huacuja, M., Snow, M., Ramos-Madrigal, J., Mendoza-Caamal, E., Baca, P., López-Escobar, T. A., Bolnick, D. A., Flores-Martínez, S. E., Ortiz-Lopez, R., Kostic, A. D., Villafan-Bernal, J. R., Galaviz-Hernández, C., Centeno-Cruz, F., García-Zapién, A. G., Monge-Cázares, T., Lazalde-Ramos, B. P. & 7 others, , 2022, In: Genes. 13, 12, 10 p., 2251.Research output: Contribution to journal › Journal article › Research › peer-review
- 2021
- Published
Extended survival of Pleistocene Siberian wolves into the early 20th century on the island of Honshu
Niemann, Jonas, Gopalakrishnan, Shyam, Yamaguchi, N., Ramos Madrigal, Jazmin, Wales, N., Gilbert, M Thomas P & Sinding, M. S., 2021, In: iScience. 24, 25 p., 101904.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Historical population declines prompted significant genomic erosion in the northern and southern white rhinoceros (Ceratotherium simum)
Sánchez-Barreiro, F., Gopalakrishnan, Shyam, Ramos Madrigal, Jazmin, Westbury, Michael Vincent, de Manuel, M., Margaryan, Ashot, Ciucani, M. M., Vieira, Filipe Garrett, Patramanis, Ioannis, Kalthoff, D. C., Timmons, Z., Sicheritz-Pontén, Thomas, Dalén, L., Ryder, O. A., KU, thw266, Marques-Bonet, T., Moodley, Y. & Gilbert, M Thomas P, 2021, In: Molecular Ecology. 30, 23, p. 6355-6369 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Kouprey (Bos sauveli) genomes unveil polytomic origin of wild Asian Bos
Sinding, M. S., Ciucani, M. M., Ramos Madrigal, Jazmin, Carmagnini, A., Rasmussen, Jacob Agerbo, Feng, S., Chen, G., Vieira, Filipe Garrett, Mattiangeli, V., Ganjoo, R. K., Larson, G., Sicheritz-Pontén, Thomas, Petersen, Bent, Frantz, L., Gilbert, M Thomas P & Bradley, D. G., 2021, In: iScience. 24, 11, 18 p., 103226.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modern Siberian dog ancestry was shaped by several thousand years of Eurasian-wide trade and human dispersal
Feuerborn, T. R., Carmagnini, A., Losey, R. J., Nomokonova, T., Askeyev, A., Askeyev, I., Askeyev, O., Antipina, E. E., Appelt, M., Bachura, O. P., Beglane, F., Bradley, D. G., Daly, K. G., Gopalakrishnan, S., Gregersen, K. M., Guo, C., Gusev, A. V., Jones, C., Kosintsev, P. A., Kuzmin, Y. V. & 17 others, , 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 39, e2100338118.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The genomic landscape of Mexican Indigenous populations brings insights into the peopling of the Americas
García-Ortiz, H., Barajas-Olmos, F., Contreras-Cubas, C., Cid-Soto, M. Á., Córdova, E. J., Centeno-Cruz, F., Mendoza-Caamal, E., Cicerón-Arellano, I., Flores-Huacuja, M., Baca, P., Bolnick, D. A., Snow, M., Flores-Martínez, S. E., Ortiz-Lopez, R., Reynolds, A. W., Blanchet, A., Morales-Marín, M., Velázquez-Cruz, R., Kostic, A. D., Galaviz-Hernández, C. & 20 others, , 2021, In: Nature Communications. 12, 12 p., 5942.Research output: Contribution to journal › Journal article › Research › peer-review
- 2020
- Published
The dental proteome of Homo antecessor: {with Author Correction]
Welker, F., Ramos-Madrigal, J., Gutenbrunner, P., Mackie, M., Tiwary, S., Rakownikow Jersie-Christensen, R., Chiva, C., Dickinson, M. R., Kuhlwilm, M., de Manuel, M., Gelabert, P., Martinón-Torres, M., Margvelashvili, A., Arsuaga, J. L., Carbonell, E., Marques-Bonet, T., Penkman, K., Sabidó, E., Cox, J., Olsen, J. V. & 6 others, , Apr 2020, In: Nature. 580, 7802, p. 235-238 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient Plant Genomics in Archaeology, Herbaria, and the Environment
Kistler, L., Bieker, V. C., Martin, M. D., Pedersen, Mikkel Winther, Ramos Madrigal, Jazmin & Wales, N., 2020, In: Annual Review of Plant Biology. 71, p. 605-629 25 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Arctic-adapted dogs emerged at the Pleistocene-Holocene transition
Sinding, M. H. S., Gopalakrishnan, S., Ramos-Madrigal, J., de Manuel, M., Pitulko, V. V., Kuderna, L., Feuerborn, T. R., Frantz, L. A. F., Vieira, F. G., Niemann, J., Samaniego Castruita, J. A., Carøe, C., Andersen-Ranberg, E. U., Jordan, P. D., Pavlova, E. Y., Nikolskiy, P. A., Kasparov, A. K., Ivanova, V. V., Willerslev, E., Skoglund, P. & 15 others, , 2020, In: Science (New York, N.Y.). 368, 6498, p. 1495-1499 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomes of Pleistocene Siberian Wolves Uncover Multiple Extinct Wolf Lineages
Ramos-Madrigal, J., Sinding, M-H. S., Carøe, C., Mak, S. S. T., Niemann, J., Samaniego Castruita, J. A., Fedorov, S., Kandyba, A., Germonpré, M., Bocherens, H., Feuerborn, T. R., Pitulko, V. V., Pavlova, E. Y., Nikolskiy, P. A., Kasparov, A. K., Ivanova, V. V., Larson, G., Frantz, L. A. F., Willerslev, E., Meldgaard, M. & 7 others, , 2020, In: Current biology : CB. 31, p. 198-206Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic Adaptations and Evolutionary History of the Extinct Scimitar-Toothed Cat, Homotherium latidens
Barnett, R., Westbury, M. V., Sandoval-Velasco, M., Vieira, F. G., Jeon, S., Zazula, G., Martin, M. D., Ho, S. Y. W., Mather, N., Gopalakrishnan, S., Ramos-Madrigal, J., de Manuel, M., Zepeda-Mendoza, M. L., Antunes, A., Baez, A. C., De Cahsan, B., Larson, G., O’Brien, S. J., Eizirik, E., Johnson, W. E. & 11 others, , 2020, In: Current Biology. 30, p. 5018-5025Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic insights into the early peopling of the Caribbean
Nägele, K., Posth, C., Iraeta Orbegozo, M., de Armas, Y. C., Hernandez Godoy, S. T., Herrera, U. M. G., Nieves-Colon, M. A., Sandoval-Velasco, M., Mylopotamitaki, D., Radzeviciute, R., Laffoon, J., Pestle, W. J., Ramos-Madrigal, J., Lamnidis, T. C., Schaffer, W. C., Carr, R. S., Day, J. S., Arredondo Antunez, C., Rangel Rivero, A., Martinez-Fuentes, A. J. & 9 others, , 2020, In: Science. 369, 6502, p. 456-460Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Near-Random Distribution of Chromosome-Derived Circular DNA in the Condensed Genome of Pigeons and the Larger, More Repeat-Rich Human Genome
Møller, H. D., Ramos Madrigal, Jazmin, Prada Luengo, Inigo, Gilbert, M Thomas P & Regenberg, Birgitte, 2020, In: Genome Biology and Evolution. 12, 2, p. 3762-3777 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Tracking the history of grapevine cultivation in Georgia by combining geometric morphometrics and ancient DNA
Bouby, L., Wales, N., Jalabadze, M., Rusishvili, N., Bonhomme, V., Ramos Madrigal, Jazmin, Evin, A., Ivorra, S., Lacombe, T., Pagnoux, C., Boaretto, E., Gilbert, M Thomas P, Bacilieri, R., Lordkipanidze, D. & Maghradze, D., 2020, In: Vegetation History and Archaeobotany. 30, p. 63-76 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2019
- Published
Palaeoproteomic analysis of Early Pleistocene Gigantopithecus blacki
Welker, Frido, Ramos Madrigal, Jazmin, Wang, W., Kuhlwilm, M., Montero, M. D. M., Demeter, Fabrice, Lalueza-Fox, C., Marques-Bonet, T., Olsen, Jesper Velgaard & Cappellini, Enrico, Mar 2019, In: American Journal of Physical Anthropology. 168, suppl. 68, p. 265-266Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Ancient DNA analysis of a nineteenth century tobacco pipe from a Maryland slave quarter
Schablitsky, J. M., Witt, K. E., Ramos Madrigal, Jazmin, Ellegaard, M. R., Malhi, R. S. & Schroeder, Hannes, 2019, In: Journal of Archaeological Science. 105, p. 11-18 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny
Cappellini, E., Welker, F., Pandolfi, L., Ramos-Madrigal, J., Samodova, D., Rüther, P. L., Fotakis, A. K., Lyon, D., Moreno-Mayar, J. V., Bukhsianidze, M., Rakownikow Jersie-Christensen, R., Mackie, M., Ginolhac, A., Ferring, R., Tappen, M., Palkopoulou, E., Dickinson, M. R., Stafford, T. W., Chan, Y. L., Götherström, A. & 23 others, , 2019, In: Nature. 574, 7776, p. 103-107Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Enamel proteome shows that Gigantopithecus was an early diverging pongine
Welker, Frido, Ramos Madrigal, Jazmin, Kuhlwilm, M., Liao, W., Gutenbrunner, P., de Manuel, M., Samodova, D., Mackie, Meaghan, Allentoft, Morten Erik, Bacon, A., Collins, Matthew James, Cox, J., Lalueza-Fox, C., Olsen, Jesper Velgaard, Demeter, Fabrice, Wang, W., Marques-Bonet, T. & Cappellini, Enrico, 2019, In: Nature. 576, p. 262-265Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Palaeogenomic insights into the origins of French grapevine diversity
Ramos Madrigal, Jazmin, Runge, Anne Kathrine Wiborg, Bouby, L., Lacombe, T., Samaniego Castruita, J. A., Adam-Blondon, A., Figueiral, I., Hallavant, C., Schaal, C., Töpfer, R., Petersen, Bent, Sicheritz-Pontén, T., This, P., Bacilieri, R., Gilbert, M Thomas P & Wales, N., 2019, In: Nature Plants. 5, 6, p. 595-603 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The efficacy of whole human genome capture on ancient dental calculus and dentin
Ziesemer, K. A., Ramos Madrigal, Jazmin, Mann, A. E., Brandt, B. W., Sankaranarayanan, K., Ozga, A. T., Hoogland, M., Hofman, C. A., Salazar-Garcia, D. C., Frohlich, B., Milner, G. R., Stone, A. C., Aldenderfer, M., Lewis, C. M., Hofman, C. L., Warinner, C. & Schroeder, Hannes, 2019, In: American Journal of Physical Anthropology. 168, 3, p. 496-509Research output: Contribution to journal › Journal article › Research › peer-review
- 2018
- Published
Multiproxy evidence highlights a complex evolutionary legacy of maize in South America
Kistler, L., Maezumi, S. Y., Gregorio De Souza, J., Przelomska, N. A. S., Malaquias Costa, F., Smith, O., Loiselle, H., Ramos Madrigal, Jazmin, Wales, N., Ribeiro, E. R., Morrison, R. R., Grimaldo, C., Prous, A. P., Arriaza, B., Gilbert, M Thomas P, De Oliveira Freitas, F. & Allaby, R. G., 14 Dec 2018, In: Science. 362, 6420, p. 1309-1313Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interspecific Gene Flow Shaped the Evolution of the Genus Canis
Gopalakrishnan, S., Sinding, M. H. S., Ramos-Madrigal, J., Niemann, J., Samaniego Castruita, J. A., Vieira, F. G., Carøe, C., Montero, M. D. M., Kuderna, L., Serres, A., González-Basallote, V. M., Liu, Y. H., Wang, G. D., Marques-Bonet, T., Mirarab, S., Fernandes, C., Gaubert, P., Koepfli, K. P., Budd, J., Rueness, E. K. & 7 others, , 2018, In: Current Biology. 28, 21, p. 3441-3449Research output: Contribution to journal › Journal article › Research › peer-review
- 2017
- Published
An expanded mammal mitogenome dataset from Southeast Asia
Mohd Salleh, F. B., Ramos Madrigal, Jazmin, Peñaloza, F., Liu, Shanlin, Sinding, Mikkel Holger Strander, Patel, R. P., Martins, R., Lenz, D., Fickel, J., Roos, C., Shamsir, M. S., Azman, M. S., Lim, B. K., Rossiter, S. J., Wilting, A. & Gilbert, M Thomas P, Aug 2017, In: GigaScience. 6, 8, p. 1–8 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Whole human genome enrichment on dental calculus
Ziesemer, K. A., Ramos Madrigal, Jazmin, Mann, A. E., Sankaranarayanan, K., Warinner, C., Hofman, C. & Schroeder, Hannes, 2017, In: American Journal of Physical Anthropology. 162, Supplement S64, p. 422 1 p.Research output: Contribution to journal › Conference abstract in journal › Research
- 2016
- Published
The limits and potential of paleogenomic techniques for reconstructing grapevine domestication
Wales, N., Ramos Madrigal, J., Cappellini, E., Baez, A. C., Samaniego Castruita, J. A., Romero-Navarro, J. A., Carøe, C., Avila Arcos, M. D. C., Peñaloza, F., Moreno Mayar, J. V., Gasparyan, B., Zardaryan, D., Bagoyan, T., Smith, A., Pinhasi, R., Bosi, G., Fiorentino, G., Grasso, A. M., Celant, A., Bar-Oz, G. & 7 others, , Aug 2016, In: Journal of Archaeological Science. 72, p. 57-70 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome sequence of a 5,310-year-old maize cob provides insights into the early stages of maize domestication
Ramos Madrigal, Jazmin, Smith, B. D., Moreno Mayar, J. Víctor, Gopalakrishnan, Shyam, Ross-Ibarra, J., Gilbert, M Thomas P & Wales, N., 2016, In: Current Biology. 26, 23, p. 3195-3201 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Next-generation biology: sequencing and data analysis approaches for non-model organisms
Rodrigues da Fonseca, Rute Andreia, Albrechtsen, Anders, Themudo, G. E. C., Ramos Madrigal, Jazmin, Sibbesen, Jonas Andreas, Sørensen, L. M., Zepeda Mendoza, M. L., Campos, P., Heller, Rasmus & Pereira, R., 2016, In: Marine Genomics. 30, p. 3-13Research output: Contribution to journal › Journal article › Research › peer-review
- 2015
- Published
New insights on single-stranded versus double-stranded DNA library preparation for ancient DNA
Wales, N., Carøe, C., Sandoval-Velasco, Marcela, Gamba, C., Barnett, R., Samaniego Castruita, J. A., Ramos Madrigal, Jazmin, Orlando, L. A. A. & Gilbert, M Thomas P, 2015, In: BioTechniques. 59, 6, p. 368-371 4 p.Research output: Contribution to journal › Letter › Research › peer-review
ID: 125364889
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Next-generation biology: sequencing and data analysis approaches for non-model organisms
Research output: Contribution to journal › Journal article › Research › peer-review
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301
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The efficacy of whole human genome capture on ancient dental calculus and dentin
Research output: Contribution to journal › Journal article › Research › peer-review
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227
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Interspecific Gene Flow Shaped the Evolution of the Genus Canis
Research output: Contribution to journal › Journal article › Research › peer-review
Published