Matthew James Collins
Professor
Section for Geobiology
Øster Farimagsgade 5, bygning 7, 1353 København K
- 2024
- Published
Beescapes – extracting pollen from historical Danish beeswax to explore honeybee foraging
Kasso, Tuuli Marikki, Jensen, Annette Bruun, Johns, S., Roffet-Salque, M., Collins, Matthew James & Enevold, R., 2024, In: Palynology. 48, 2, 9 p., 2288220.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Non-avian dinosaur eggshell calcite can contain ancient, endogenous amino acids
Saitta, E. T., Vinther, J., Crisp, M. K., Abbott, G. D., Wheeler, L., Presslee, S., Kaye, T. G., Bull, I., Fletcher, I., Chen, X., Vidal, D., Sanguino, F., Buscalioni, Á. D., Calvo, J., Sereno, P. C., Baumgart, S. L., Pittman, M., Collins, M. J., Sakalauskaite, J., Mackie, M. & 7 others, , 2024, In: Geochimica et Cosmochimica Acta. 365, p. 1-20 20 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2023
- Published
Threads of memory: Reviving the ornament of a dead child at the Neolithic village of Ba`ja (Jordan)
Alarashi, H., Benz, M., Gresky, J., Burkhardt, A., Fischer, A., Gourichon, L., Gerlitzki, M., Manfred, M., Sakalauskaite, J., Demarchi, B., Mackie, Meaghan, Collins, Matthew James, Odriozola, C. P., Garrido Cordero, J. Á., Avilés, M. Á., Vigorelli, L., Re, A. & Gebel, H. G. K., 2023, In: PLoS ONE. 18, 8, 54 p., e0288075.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Human and animal skin identified by palaeoproteomics in Scythian leather objects from Ukraine
Brandt, Luise Ørsted, Mackie, Meaghan, Daragan, M., Collins, Matthew James & Gleba, M., 2023, In: PLoS ONE. 18, 12, 21 p., e0294129.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Grim up North? Exploring the diet of urban populations in post-medieval Greater Manchester, England, using stable isotope analysis
Chidimuro, B., Holst, M., Newman, S., Keefe, K., Collins, Matthew James & Alexander, M., 2023, In: Archaeological and Anthropological Sciences. 15, 11, 19 p., 174.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
North and South: Exploring isotopic analysis of bone carbonates and collagen to understand post-medieval diets in London and northern England
Chidimuro, B., Doherty, S., Finch, J., Ponce, P., Eggington, J., Delaney, S., Speller, C., Collins, Matthew James, Holst, M. & Alexander, M., 2023, In: American journal of biological anthropology. 182, 1, p. 126-142 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Tracking the British agricultural revolution through the isotopic analysis of dated parchment
Doherty, S. P., Alexander, M. M., Henderson, S., Newton, J., Finch, J. & Collins, Matthew James, 2023, In: Scientific Reports. 13, 7 p., 61.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bioarchaeological and paleogenomic profiling of the unusual Neolithic burial from Grotta di Pietra Sant’Angelo (Calabria, Italy)
Fontani, F., Boano, R., Cinti, A., Demarchi, B., Sandron, S., Rampelli, S., Candela, M., Traversari, M., Latorre, A., Iacovera, R., Abondio, P., Sarno, S., Mackie, M., Collins, M., Radini, A., Milani, C., Petrella, E., Giampalma, E., Minelli, A., Larocca, F. & 2 others, , 2023, In: Scientific Reports. 13, 15 p., 11978.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Survival of environmental DNA in sediments: Mineralogic control on DNA taphonomy
Freeman, C. L., Dieudonné, L., Agbaje, Oluwatoosin Bunmi Adebayo, Zure, Marina, Sanz, J. Q., Collins, Matthew James & Sand, Karina Krarup, 2023, In: Environmental DNA. 5, 6, p. 1691-1705 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Molecular exploration of fossil eggshell uncovers hidden lineage of giant extinct bird
Grealy, A., Miller, G. H., Phillips, M. J., Clarke, S. J., Fogel, M., Patalwala, D., Rigby, P., Hubbard, A., Demarchi, B., Collins, Matthew James, Mackie, Meaghan, Sakalauskaite, J., Stiller, Josefin, Clarke, J. A., Legendre, L. J., Douglass, K., Hansford, J., Haile, J. & Bunce, M., 2023, In: Nature Communications. 14, 14 p., 914.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Tryps-IN: A streamlined palaeoproteomics workflow enables ZooMS analysis of 10,000-year-old petrous bones from Jordan rift-valley
Jensen, Theis Zetner Trolle, Yeomans, Lisa, Le Meillour, Louise, Nielsen, P. W., Ramsøe, Max Emil Ermter, Mackie, Meaghan, Bangsgaard, Pernille, Kinzel, Moritz, Thuesen, Ingolf, Collins, Matthew James & Taurozzi, Alberto John, 2023, In: Journal of Archaeological Science: Reports. 52, 10 p., 104238.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
ArcHives — combined palynological, genomic and lipid analysis of medieval wax seals
Kasso, Tuuli Marikki, Enevold, R., Johns, S., Rangel Piñeros, Guillermo Andres, Taurozzi, Alberto John, Sutherland, Alister Harvey, Ramsøe, Max Emil Ermter, Angelova, L. V., Roffet-Salque, M., Collins, Matthew James & Carøe, C., 2023, In: Heritage Science. 11, 12 p., 11.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Parchment Glutamine Index (PQI): A novel method to estimate glutamine deamidation levels in parchment collagen obtained from low-quality MALDI-TOF data
Anila Bhuvanendran Nair, Bharath, Palomo, I. R., Markussen, Bo, Wiuf, Carsten, Fiddyment, S. & Collins, Matthew James, 2023, In: Peer Community Journal. 3, 18 p., e10.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bone collagen from subtropical Australia is preserved for more than 50,000 years
Peters, C., Wang, Y., Vakil, V., Cramb, J., Dortch, J., Hocknull, S., Lawrence, R., Manne, T., Monks, C., Rössner, G. E., Ryan, H., Siversson, M., Ziegler, T., Louys, J., Price, G. J., Boivin, N. & Collins, Matthew James, 2023, In: Communications Earth and Environment. 4, 8 p., 438.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A biological reading of a palimpsest
Viñas Caron, Laura Cristina, Rodriguez Palomo, Ismael, Fazlic, Natasha, Vnouček, J., Driscoll, Matthew James, Fiddyment, S. & Collins, Matthew James, 2023, In: iScience. 26, 6, 12 p., 106786.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Grouping groupers in the Mediterranean: Ecological baselines revealed by ancient proteins
Winter, R. M., de Kock, W., Mackie, Meaghan, Ramsøe, Max Emil Ermter, Desiderà, E., Collins, Matthew James, Guidetti, P., Presslee, S., Alegre, M. M., Oueslati, T., Muniz, A. M., Michailidis, D., van den Hurk, Youri, Taurozzi, Alberto John & Çakirlar, C., 2023, In: Ecology and Evolution. 13, 10, 11 p., e10625.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The prelude to industrial whaling: identifying the targets of ancient European whaling using zooarchaeology and collagen mass-peptide fingerprinting
van den Hurk, Y., Sikström, F., Amkreutz, L., Bleasdale, M., Borvon, A., Ephrem, B., Fernández-Rodríguez, C., Gibbs, H. M. B., Jonsson, L., Lehouck, A., Cedeira, J. M., Meng, S., Monge, R., Moreno, M., Nabais, M., Nores, C., Pis-Millán, J. A., Riddler, I., Schmölcke, U., Segschneider, M. & 6 others, , 2023, In: Royal Society Open Science. 10, 9, 16 p., 230741.Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
Parchment Glutamine Index (PQI): A novel method to estimate glutamine deamidation levels in parchment collagen obtained from low-quality MALDI-TOF data
Anila Bhuvanendran Nair, Bharath, Palomo, I. R., Markussen, Bo, Wiuf, Carsten, Fiddyment, S. & Collins, Matthew James, 2022, bioRxiv, 18 p.Research output: Working paper › Research › peer-review
- Published
Next Generation Lab puts Denmark's past in the hands of its future
Brandt, Luise Ørsted, Lillemark, Marie Rathcke, Rytter, Maria, Collins, Matthew James & Tøttrup, Anders P., 2022, In: Antiquity. 96, 385, p. 221-228 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Palaeoproteomics identifies beaver fur in Danish high-status Viking Age burials - direct evidence of fur trade
Brandt, Luise Ørsted, Taurozzi, Alberto John, Mackie, Meaghan, Sinding, Mikkel Holger Strander, Vieira, Filipe Garrett, Schmidt, A. L., Rimstad, C., Collins, Matthew James & Mannering, U., 2022, In: PLoS ONE. 17, 7, 14 p., e0270040.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Isotope analysis of human dental calculus δ13CO32-: Investigating a potential new proxy for sugar consumption
Chidimuro, B., Mundorff, A., Speller, C., Radini, A., Boudreault, N., Lucas, M., Holst, M., Lamb, A., Collins, Matthew James & Alexander, M., 2022, In: Rapid Communications in Mass Spectrometry. 36, 11, 15 p., e9286.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient proteins resolve controversy over the identity of Genyornis eggshell
Demarchi, B., Stiller, Josefin, Grealy, A., Mackie, Meaghan, Deng, Y., Gilbert, M Thomas P, Clarke, J., Legendre, L. J., Boano, R., Sicheritz-Pontén, Thomas, Magee, J., KU, thw266, Bunce, M., Collins, Matthew James & Miller, G., 2022, In: PNAS. 119, 43, 9 p., e2109326119.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Survival of mineral-bound peptides into the Miocene
Demarchi, B., Mackie, Meaghan, Li, Z., Deng, T., Collins, Matthew James & Clarke, J., 2022, In: eLife. 11, 9 p., e82849.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A modern baseline for the paired isotopic analysis of skin and bone in terrestrial mammals
Doherty, S. P., Collins, Matthew James, Harris, A. J. T., Sistiaga Gutierrez, Maria Ainara, Newton, J. & Alexander, M. M., 2022, In: Royal Society Open Science. 9, 1, 11 p., 211587.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Conformational analysis and water dynamics: a molecular dynamics study on the survival of a β-lactoglobulin peptide in the archaeological record
Fonseca, B., Freeman, C. L. & Collins, Matthew James, 2022, In: Chemical Physics. 561, 11 p., 111602.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Data From "A Biocodicological Analysis of the Medieval Library and Archive From Orval Abbey, Belgium"
Herrera Bethencourt, J., Rodriguez Palomo, I., Hickinbotham, S., Anila Bhuvanendran Nair, Bharath, Soncin, S., Dieu, M., Collins, Matthew James & Deparis, O., 22 Feb 2022, In: Journal of open archaeology data. 10, 7 p., 1.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The Vienna Genesis: An Example of Late Antique Purple Parchment
Hofmann, C., Vnouček, J., Rabitsch, S., Aceto, M., Melo, M. J., Malissa, A., Uhlir, K., Griesser, M., Hradil, K., Erlach, R., Quandt, A., Sonderegger, J., Fiddyment, S. & Collins, Matthew James, 2022, In: Restaurator. 43, 1-2, p. 3-33 31 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A 2-million-year-old ecosystem in Greenland uncovered by environmental DNA
Kjær, K. H., Pedersen, M. W., De Sanctis, B., De Cahsan, B., Korneliussen, T. S., Michelsen, C. S., Sand, K. K., Jelavić, S., Ruter, A. H., Schmidt, A. M. A., Kjeldsen, K. K., Tesakov, A. S., Snowball, I., Gosse, J. C., Alsos, I. G., Wang, Y., Dockter, C., Rasmussen, M., Jørgensen, M. E., Skadhauge, B. & 19 others, , 2022, In: Nature. 612, 7939, p. 283-291 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Histological and stable isotope analysis of archeological bones from St. Rombout's cemetery (Mechelen, Belgium): Intrasite, intraindividual, and intrabone variability
Kontopoulos, Ioannis, Van de Vijver, K., Robberechts, B., von Tersch, M., Turner-Walker, G., Penkman, K. & Collins, Matthew James, 2022, In: International Journal of Osteoarchaeology. 32, 5, p. 1142-1156 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Paleoproteomics
Warinner, C., Korzow Richter, K. & Collins, Matthew James, 2022, In: Chemical Reviews. 122, 16, p. 13401-13446 46 p.Research output: Contribution to journal › Review › Research › peer-review
- 2021
- Published
On the standardization of ZooMS nomenclature
Brown, S., Douka, K., Collins, Matthew James & Richter, K. K., 2021, In: Journal of Proteomics. 235, 6 p., 104041.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Palaeoproteomics confirm earliest domesticated sheep in southern Africa ca. 2000 BP
Coutu, A. N., Taurozzi, Alberto John, Mackie, Meaghan, Jensen, Theis Zetner Trolle, Collins, Matthew James & Sealy, J., 2021, In: Scientific Reports. 11, 1, 11 p., 6631.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Measuring the impact of parchment production on skin collagen stable isotope (δ13C and δ15N) values
Doherty, S., Alexander, M. M., Vnoucek, J., Newton, J. & Collins, Matthew James, 2021, In: STAR: Science & Technology of Archaeological Research. 7, 1, p. 1-12 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Scratching the surface: the use of sheepskin parchment to deter textual erasure in early modern legal deeds
Doherty, S. P., Henderson, S., Fiddyment, S., Finch, J. & Collins, Matthew James, 2021, In: Heritage Science. 9, 1, 6 p., 29.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Girding the loins? Direct evidence of the use of a medieval English parchment birthing girdle from biomolecular analysis
Fiddyment, S., Goodison, N. J., Brenner, E., Signorello, S., Price, K. & Collins, Matthew James, 2021, In: Royal Society Open Science. 8, 3, 202055.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bone degradation at five Arctic archaeological sites: Quantifying the importance of burial environment and bone characteristics
Matthiesen, H., Eriksen, A. M. H., Hollesen, J. & Collins, Matthew James, 2021, In: Journal of Archaeological Science. 125, 9 p., 105296.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dire wolves were the last of an ancient New World canid lineage
Perri, A. R., Mitchell, K. J., Mouton, A., Alvarez-Carretero, S., Hulme-Beaman, A., Haile, J., Jamieson, A., Meachen, J., Lin, A. T., Schubert, B. W., Ameen, C., Antipina, E. E., Bover, P., Brace, S., Carmagnini, A., Carøe, C., Samaniego Castruita, J. A., Chatters, J. C., Dobney, K., dos Reis, M. & 29 others, , 2021, In: Nature. 591, p. 87-91Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Assessing the degradation of ancient milk proteins through site-specific deamidation patterns
Ramsøe, A., Crispin, M., Mackie, Meaghan, McGrath, K., Fischer, R., Demarchi, B., Collins, Matthew James, Hendy, J. & Speller, C., 2021, In: Scientific Reports. 11, 1, 14 p., 7795.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A biocodicological analysis of the medieval library and archive from Orval Abbey, Belgium
Ruffini-Ronzani, N., Nieus, J., Soncin, S., Hickinbotham, S., Dieu, M., Bouhy, J., Charles, C., Ruzzier, C., Falmagne, T., Hermand, X., Collins, Matthew James & Deparis, O., 2021, In: Royal Society Open Science. 8, 6, 14 p., 210210.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Palaeoproteomic analyses of dog palaeofaeces reveal a preserved dietary and host digestive proteome
Runge, Anne Kathrine Wiborg, Hendy, J., Richter, K. K., Masson-MacLean, E., Britton, K., Mackie, Meaghan, McGrath, K., Collins, Matthew James, Cappellini, Enrico & Speller, C., 2021, In: Proceedings of the Royal Society B: Biological Sciences. 288, 1954, 10 p., 20210020.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The degradation of intracrystalline mollusc shell proteins: A proteomics study of Spondylus gaederopus
Sakalauskaite, J., Mackie, Meaghan, Taurozzi, Alberto John, Collins, Matthew James, Marin, F. & Demarchi, B., 2021, In: B B A - Proteins and Proteomics. 1869, 12, 19 p., 140718.Research output: Contribution to journal › Journal article › Research › peer-review
- 2020
- Published
Rapid loss of endogenous DNA in pig bone buried in five different environments
Eriksen, A. M. H., Matthiesen, H., Kontopoulos, I., Gregory, D., Snoeck, C., KU, thw266, Collins, Matthew James & Gilbert, M Thomas P, 2020, In: Archaeometry. 62, 4, p. 827-846 20 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Bone biodeterioration - The effect of marine and terrestrial depositional environments on early diagenesis and bone bacterial community
Eriksen, A. M. H., Nielsen, Tue Kjærgaard, Matthiesen, H., Carøe, C., Hansen, Lars Hestbjerg, Gregory, D. J., Turner-Walker, G., Collins, Matthew James & Gilbert, M Thomas P, 2020, In: PLoS ONE. 15, 10 October, 24 p., e0240512.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Histological study of sheep skin transformation during the recreation of historical parchment manufacture
Fourneau, M., Canon, C., Van Vlaender, D., Collins, Matthew James, Fiddyment, S., Poumay, Y. & Deparis, O., 2020, In: Heritage Science. 8, 1, 7 p., 78.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
How to get your goat: automated identification of species from MALDI-ToF spectra
Hickinbotham, S., Fiddyment, S., Stinson, T. L. & Collins, Matthew James, 2020, In: Bioinformatics. 36, 12, p. 3719-3725 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An integrated analysis of Maglemose bone points reframes the Early Mesolithic of Southern Scandinavia
Jensen, Theis Zetner Trolle, Sjöström, A., Fischer, A., Rosengren, E., Lanigan, Liam Thomas, Bennike, O., Richter, K. K., Gron, K. J., Mackie, Meaghan, Mortensen, M. F., Sørensen, L., Chivall, D., Iversen, K. H., Taurozzi, Alberto John, Olsen, J., Schroeder, Hannes, Milner, N., Sørensen, Mikkel & Collins, Matthew James, 14 Oct 2020, In: Scientific Reports. 10, 1, 12 p., 17244.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The biomolecular characterization of a finger ring contextually dated to the emergence of the Early Neolithic from Syltholm, Denmark
Jensen, Theis Zetner Trolle, Mackie, Meaghan, Taurozzi, Alberto John, Lanigan, Liam Thomas, Gundelach, C., Olsen, J., Sørensen, S. A., Collins, Matthew James, Sørensen, Mikkel & Schroeder, Hannes, 2020, In: Royal Society Open Science. 7, 1, 16 p., 191172.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Screening archaeological bone for palaeogenetic and palaeoproteomic studies
Kontopoulos, I., Penkman, K., Mullin, V. E., Winkelbach, L., Unterländer, M., Scheu, A., Kreutzer, S., Hansen, H. B., Margaryan, Ashot, Teasdale, M. D., Gehlen, B., Street, M., Lynnerup, Niels, Liritzis, I., Sampson, A., Papageorgopoulou, C., Allentoft, Morten Erik, Burger, J., Bradley, D. G. & Collins, Matthew James, Jun 2020, In: PLoS ONE. 15, 6, 17 p., e0235146.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
What's the catch? Archaeological application of rapid collagen-based species identification for Pacific Salmon
Korzow Richter, K., McGrath, K., Masson-MacLean, E., Hickinbotham, S., Tedder, A., Britton, K., Bottomley, Z., Dobney, K., Hulme-Beaman, A., Zona, M., Fischer, R., Collins, Matthew James & Speller, C. F., Apr 2020, In: Journal of Archaeological Science. 116, 16 p., 105116.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multi-protease analysis of Pleistocene bone proteomes
Lanigan, Liam Thomas, Mackie, Meaghan, Feine, S., Hublin, J., Schmitz, R. W., Wilcke, A., Collins, Matthew James, Cappellini, Enrico, Olsen, Jesper Velgaard, Taurozzi, Alberto John & Welker, Frido, 30 Sep 2020, In: Journal of Proteomics. 228, 11 p., 103889.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA preserved in jetsam whale ambergris
Macleod, R., Sinding, M. H. S., Olsen, Morten Tange, Collins, Matthew James & Rowland, S. J., 2020, In: Biology Letters. 16, 2, 6 p., 20190819 .Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A conscious rethink: Why is brain tissue commonly preserved in the archaeological record? Commentary on: Petrone P, Pucci P, Niola M, et al. Heat-induced brain vitrification from the Vesuvius eruption in C.E. 79. N Engl J Med 2020;382:383-4. DOI: 10.1056/NEJMc1909867
Morton-Hayward, A. L., Thompson, T., Thomas-Oates, J. E., Buckley, S., Petzold, A., Ramsøe, Abigail Daisy, O'Connor, S. & Collins, Matthew James, 2020, In: STAR: Science & Technology of Archaeological Research. 6, 1, p. 87-95 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DeamiDATE 1.0: Site-specific deamidation as a tool to assess authenticity of members of ancient proteomes
Ramsøe, A., van Heekeren, V., Ponce, P., Fischer, R., Barnes, I., Speller, C. & Collins, Matthew James, Mar 2020, In: Journal of Archaeological Science. 115, 10 p., 105080.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Saving Bones: a direct comparison of FTIR-ATR, whole bone percent nitrogen, and NIR
Ryder, C. M., Sponheimer, M., Shokry, Hussein, Lazagabaster, I. A., Marom, N., Monnier, G. F., Collins, Matthew James, Deviese, T. & Higham, T., 2020, p. 243-243.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
- Published
Comparing biological and pathological factors affecting osteocalcin concentrations in archaeological skeletal remains
Scott, A. B., Taurozzi, Alberto John, Hughes, N., Pedersen, D. D., Kontopoulos, Ioannis, Mackie, Meaghan & Collins, Matthew James, 2020, In: Journal of Archaeological Science: Reports. 34, Part A, 9 p., 102573.Research output: Contribution to journal › Journal article › Research › peer-review
- 2019
- Published
New insights into Neolithic milk consumption through proteomic analysis of dental calculus
Charlton, S., Ramsøe, Abigail Daisy, Collins, Matthew James, Craig, O., Fischer, R., Alexander, M. & Speller, C., 2019, In: Archaeological and Anthropological Sciences. 11, 11, p. 6183-6196 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
So you want to do biocodicology? A field guide to the biological analysis of parchment
Fiddyment, S., Teasdale, M. D., Vnouček, J., Lévêque, É., Binois, A. & Collins, Matthew James, 2019, In: Heritage Science. 7, 10 p., 35.Research output: Contribution to journal › Review › Research › peer-review
- Published
A 5700 year-old human genome and oral microbiome from chewed birch pitch
Jensen, T. Z. T., Niemann, J., Iversen, K. H., Fotakis, A. K., Gopalakrishnan, S., Vågene, Å. J., Pedersen, M. W., Sinding, M-H. S., Ellegaard, M. R., Allentoft, M. E., Lanigan, L. T., Taurozzi, A. J., Nielsen, S. H., Dee, M. W., Mortensen, M. N., Christensen, M. C., Sørensen, S. A., Collins, M. J., Gilbert, M. T. P., Sikora, M. & 2 others, , 2019, In: Nature Communications. 10, 10 p., 5520.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bone diagenesis in a Mycenaean secondary burial (Kastrouli, Greece)
Kontopoulos, I., Penkman, K., Liritzis, I. & Collins, Matthew James, 2019, In: Archaeological and Anthropological Sciences. 11, 10, p. 5213-5230Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Petrous bone diagenesis: a multi-analytical approach
Kontopoulos, I., Penkman, K., McAllister, G. D., Lynnerup, Niels, Damgaard, P. B., Hansen, H. B., Allentoft, Morten Erik & Collins, Matthew James, 2019, In: Palaeogeography, Palaeoclimatology, Palaeoecology. 518, p. 143-154 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient amino acids from fossil feathers in amber
McCoy, V. E., Gabbott, S. E., Penkman, K., Collins, Matthew James, Presslee, S., Holt, J., Grossman, H., Wang, B., Kraemer, M. M. S., Delclòs, X. & Peñalver, E., 2019, In: Scientific Reports. 9, 8 p., 6420.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Identifying Archaeological Bone via Non-Destructive ZooMS and the Materiality of Symbolic Expression: Examples from Iroquoian Bone Points
McGrath, K., Rowsell, K., St-Pierre, C. G., Tedder, A., Foody, G., Roberts, C., Speller, C. & Collins, Matthew James, 30 Jul 2019, In: Scientific Reports. 9, 10 p., 11027.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Palaeoproteomics resolves sloth relationships
Presslee, S., Slater, G. J., Pujos, F., Forasiepi, A. M., Fischer, R., Molloy, K., Mackie, M., Olsen, J. V., Kramarz, A., Taglioretti, M., Scaglia, F., Lezcano, M., Lanata, J. L., Southon, J., Feranec, R., Bloch, J., Hajduk, A., Martin, F. M., Salas Gismondi, R., Reguero, M. & 6 others, , 2019, In: Nature Ecology & Evolution. 3, p. 1121-1130Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Medieval women's early involvement in manuscript production suggested by lapis lazuli identification in dental calculus
Radini, A., Tromp, M., Beach, A., Tong, E., Speller, C., McCormick, M., Dudgeon, J. V., Collins, Matthew James, Rühli, F., Kröger, R. & Warinner, C., 2019, In: Science Advances. 26, 2, 9 p., eaau7126.Research output: Contribution to journal › Journal article › Research › peer-review
Ionisation bias undermines the use of matrix-assisted laser desorption/ionisation for estimating peptide deamidation: synthetic peptide studies demonstrate electrospray ionisation gives more reliable response ratios
Simpson, J. P., Fascione, M., Bergström, E., Wilson, J., Collins, Matthew James, Penkman, K. E. H. & Thomas-Oates, J., 2019, In: Rapid Communications in Mass Spectrometry. 33, 12, p. 1049-1057 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Analysis of faecal substrates sheds light into coprostanol origin, preservation and diagenesis
Sistiaga Gutierrez, Maria Ainara, Poyet, M., Groussin, M., Collins, Matthew James & Summons, R. E., 2019, 29th International Meeting on Organic Geochemistry. European Association of Geoscientists and Engineers, p. 1-2 (Conference Proceedings, Vol. 2019).Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review
- Published
Ancient cattle genomics, origins, and rapid turnover in the Fertile Crescent
Verdugo, M. P., Mullin, V. E., Scheu, A., Mattiangeli, V., Daly, K. G., Delser, P. M., Hare, A. J., Burger, J., Collins, M. J., Kehati, R., Hesse, P., Fulton, D., Sauer, E. W., Mohaseb, F. A., Davoudi, H., Khazaeli, R., Lhuillier, J., Rapin, C., Ebrahimi, S., Khasanov, M. & 21 others, , 1 Jan 2019, In: Science. 365, 6449, p. 173-176 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Enamel proteome shows that Gigantopithecus was an early diverging pongine
Welker, Frido, Ramos Madrigal, Jazmin, Kuhlwilm, M., Liao, W., Gutenbrunner, P., de Manuel, M., Samodova, D., Mackie, Meaghan, Allentoft, Morten Erik, Bacon, A., Collins, Matthew James, Cox, J., Lalueza-Fox, C., Olsen, Jesper Velgaard, Demeter, Fabrice, Wang, W., Marques-Bonet, T. & Cappellini, Enrico, 2019, In: Nature. 576, p. 262-265Research output: Contribution to journal › Journal article › Research › peer-review
- 2018
- Published
Species identification using ZooMS, with reference to the exploitation of animal resources in the medieval town of Odense
Brandt, Luise Ørsted, Haase, K. & Collins, Matthew James, 2018, In: Danish Journal of Archaeology. 7, 2, p. 139-153Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient goat genomes reveal mosaic domestication in the Fertile Crescent
Daly, K. G., Maisano Delser, P., Mullin, V. E., Scheu, A., Mattiangeli, V., Teasdale, M. D., Hare, A. J., Burger, J., Verdugo, M. P., Collins, M. J., Kehati, R., Erek, C. M., Bar-oz, G., Pompanon, F., Cumer, T., Çakırlar, C., Mohaseb, A. F., Decruyenaere, D., Davoudi, H., Çevik, Ö. & 20 others, , 2018, In: Science. 361, 6397, p. 85-88Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A guide to ancient protein studies
Hendy, J., Welker, Frido, Demarchi, B., Speller, C., Warinner, C. & Collins, Matthew James, 2018, In: Nature Ecology & Evolution. 2, p. 791-799 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient proteins from ceramic vessels at Çatalhöyük West reveal the hidden cuisine of early farmers
Hendy, J., Colonese, A. C., Franz, I., Fernandes, R., Fischer, R., Orton, D., Lucquin, A., Spindler, L., Anvari, J., Stroud, E., Biehl, P. F., Speller, C., Boivin, N., Mackie, Meaghan, Jersie-Christensen, R. R., Olsen, Jesper Velgaard, Collins, Matthew James, Craig, O. E. & Rosenstock, E., 1 Dec 2018, In: Nature Communications. 9, 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Proteomic evidence of dietary sources in ancient dental calculus
Hendy, J., Warinner, C., Bouwman, A., Collins, Matthew James, Fiddyment, S., Fischer, R., Hagan, R., Hofman, C. A., Holst, M., Chaves, E., Klaus, L., Larson, G., Mackie, Meaghan, McGrath, K., Mundorff, A. Z., Radini, A., Rao, H., Trachsel, C., Velsko, I. M. & Speller, C. F., 2018, In: Proceedings of the Royal Society B: Biological Sciences. 285, 1883, 977.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stone Age “chewing gum” yields 5,700 yearold human genome and oral microbiome
Jensen, Theis Zetner Trolle, Niemann, Jonas, Iversen, K. H., Fotaki, Anna Katerina, Gopalakrishan, S., Sinding, Mikkel Holger Strander, Ellegaard, M. R., Allentoft, Morten Erik, Lanigan, Liam Thomas, Taurozzi, Alberto John, Nielsen, Sofie Holtsmark, Dee, M. W., Mortensen, M. N., Christensen, M. C., Sørensen, S. A., Collins, Matthew James, Gilbert, M Thomas P, Sikora, Martin, Rasmussen, Simon & Schroeder, Hannes, 2018, bioRxiv, 32 p.Research output: Working paper › Preprint › Research
- Published
Diagenesis of archaeological bone and tooth
Kendall, C., Eriksen, A. M. H., Kontopoulos, I., Collins, Matthew James & Turner-Walker, G., 2018, In: Palaeogeography, Palaeoclimatology, Palaeoecology - An International Journal for the Geo-Sciences. 491, p. 21-37 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Preparation of bone powder for FTIR-ATR analysis: The particle size effect
Kontopoulos, Ioannis, Presslee, S., Penkman, K. & Collins, Matthew James, 1 Nov 2018, In: Vibrational Spectroscopy. 99, p. 167-177Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exaggerated expectations in ancient starch research and the need for new taphonomic and authenticity criteria
Mercader, J., Akeju, T., Brown, M., Bundala, M., Collins, Matthew James, Copeland, L., Crowther, A., Dunfield, P., Henry, A., Inwood, J., Itambu, M., Kim, J., Larter, S., Longo, L., Oldenburg, T., Patalano, R., Sammynaiken, R., Soto, M., Tyler, R. & Xhauflair, H., 2018, In: Facets. 3, p. 777-798 22 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comment on "Ecological niche of Neanderthals from Spy Cave revealed by nitrogen isotopes of individual amino acids in collagen" [J. Hum. Evol. 93 (2016) 82-90]
O'Connell, T. C. & Collins, Matthew James, 2018, In: Journal of Human Evolution. 117, p. 53-55 3 p.Research output: Contribution to journal › Editorial › Research › peer-review
- Published
Collagen proteins exchange oxygen with demineralisation and gelatinisation reagents and also with atmospheric moisture
von Holstein, I. C. C., von Tersch, M., Coutu, A. N., Penkman, K. E. H., Makarewicz, C. A. & Collins, Matthew James, 2018, In: Rapid Communications in Mass Spectrometry. 32, 6, p. 523-534 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2017
- Published
New criteria for the molecular identification of cereal grains associated with archaeological artefacts
Colonese, A. C., Hendy, J., Lucquin, A., Speller, C. F., Collins, Matthew James, Carrer, F., Gubler, R., Kühn, M., Fischer, R. & Craig, O. E., 26 Jul 2017, In: Scientific Reports. 7, 7 p., 6633.Research output: Contribution to journal › Journal article › Research › peer-review
Aspartic acid racemization: Applications to forensic and archaeological age estimation
Griffin, R. C. & Collins, Matthew James, 1 Jan 2017, Mechanisms Linking Aging, Diseases and Biological Age Estimation. Zapico, S. C. (ed.). CRC Press, p. 47-56 10 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Preservation of the metaproteome: variability of protein preservation in ancient dental calculus
Mackie, Meaghan, Hendy, J., Ramsøe, Abigail Daisy, Sperduti, A., Holst, M., Collins, Matthew James & Speller, C. F., 11 Aug 2017, In: STAR: Science & Technology of Archaeological Research. 3, 1, p. 74-86 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The identification of archaeological eggshell using peptide markers
Presslee, S., Wilson, J., Woolley, J., Best, J., Russell, D., Radini, A., Fischer, R., Kessler, B., Boano, R., Collins, Matthew James & Demarchi, B., 2017, In: STAR: Science & Technology of Archaeological Research. 3, 1, p. 89-99 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
Multiple Microanalyses of a Sample from the Vinland Map
Sommer, D. V. P., Mühlen Axelsson, K., Collins, Matthew James, Fiddyment, S., Bredal-Jørgensen, J., Simonsen, K. P., Lauridsen, C. B. & Larsen, R., Apr 2017, In: Archaeometry. 59, 2, p. 287-301Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The York Gospels: a 1000-year biological palimpsest
Teasdale, M. D., Fiddyment, S., Vnouček, J., Mattiangeli, V., Speller, C., Binois, A., Carver, M., Dand, C., Newfield, T. P., Webb, C. C., Bradley, D. G. & Collins, Matthew James, 25 Oct 2017, In: Royal Society Open Science. 4, 10, 11 p., 170988.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The dental calculus metabolome in modern and historic samples
Velsko, I. M., Overmyer, K. A., Speller, C., Klaus, L., Collins, Matthew James, Loe, L., Frantz, L. A. F., Sankaranarayanan, K., Lewis, C. M., Martinez, J. B. R., Chaves, E., Coon, J. J., Larson, G. & Warinner, C., Nov 2017, In: Metabolomics. 13, 11, 17 p., 134.Research output: Contribution to journal › Journal article › Research › peer-review
Variations in glutamine deamidation for a Châtelperronian bone assemblage as measured by peptide mass fingerprinting of collagen
Welker, Frido, Soressi, M. A., Roussel, M., van Riemsdijk, I., Hublin, J. & Collins, Matthew James, 4 Jan 2017, In: STAR: Science & Technology of Archaeological Research. 3, 1, p. 15-27 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2016
Finding Britain's last hunter-gatherers: a new biomolecular approach to ‘unidentifiable’ bone fragments utilising bone collagen
Charlton, S., Alexander, M., Collins, Matthew James, Milner, N., Mellars, P., O'Connell, T. C., Stevens, R. E. & Craig, O. E., 2016, In: Journal of Archaeological Science. 73, p. 55-61 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
Mapping the Elephants of the 19th Century East African Ivory Trade with a Multi-Isotope Approach
Coutu, A. N., Lee-Thorp, J., Collins, Matthew James & Lane, P. J., 2016, In: PLoS ONE. 11, 10, 23 p., e0163606.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Protein sequences bound to mineral surfaces persist into deep time
Demarchi, B., Hall, S., Roncal-Herrero, T., Freeman, C. L., Woolley, J., Crisp, M. K., Wilson, J., Fotakis, A. K., Fischer, R., Kessler, B. M., Jersie-Christensen, R. R., Olsen, J. V., Haile, J., Thomas, J., Marean, C. W., Parkington, J., Presslee, S., Lee-Thorp, J., Ditchfield, P., Hamilton, J. F. & 16 others, , 2016, In: eLife. 5, 50 p., e17092.Research output: Contribution to journal › Journal article › Research › peer-review
Using combined biomolecular methods to explore whale exploitation and social aggregation in hunter-gatherer-fisher society in Tierra del Fuego
Evans, S., Godino, I. B. I., Álvarez, M., Rowsell, K., Collier, P., de Goodall, R. N. P., Mulville, J., Lacrouts, A., Collins, Matthew James & Speller, C., 2016, In: Journal of Archaeological Science: Reports. 6, p. 757-767 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
A mass spectrometry method for the determination of the species of origin of gelatine in foods and pharmaceutical products
Grundy, H. H., Reece, P., Buckley, M., Solazzo, C. M., Dowle, A. A., Ashford, D., Charlton, A. J., Wadsley, M. K. & Collins, Matthew James, 2016, In: Food Chemistry. 190, p. 276-284 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
The challenge of identifying tuberculosis proteins in archaeological tissues
Hendy, J., Collins, Matthew James, Teoh, K. Y., Ashford, D. A., Thomas-Oates, J., Donoghue, H. D., Pap, I., Minnikin, D. E., Spigelman, M. & Buckley, M., 2016, In: Journal of Archaeological Science. 66, p. 146-153 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
Poor preservation of antibodies in archaeological human bone and dentine
Kendall, R., Hendy, J., Collins, Matthew James, Millard, A. R. & Gowland, R. L., 2016, In: Science and Technology of Archaeological Research. 2, 1, p. 15-24 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
Technological Analysis of the World's Earliest Shamanic Costume: A Multi-Scalar, Experimental Study of a Red Deer Headdress from the Early Holocene Site of Star Carr, North Yorkshire, UK
Little, A., Elliott, B., Conneller, C., Pomstra, D., Evans, A. A., Fitton, L. C., Holland, A., Davis, R., Kershaw, R., O'Connor, S., O'Connor, T., Sparrow, T., Wilson, A. S., Jordan, P., Collins, M. J., Colonese, A. C., Craig, O. E., Knight, R., Lucquin, A. J. A., Taylor, B. & 1 others, , 2016, In: PLoS ONE. 11, 4, 10 p., e0152136.Research output: Contribution to journal › Journal article › Research › peer-review
Genomic signals of migration and continuity in Britain before the Anglo-Saxons
Martiniano, R., Caffell, A., Holst, M., Hunter-Mann, K., Montgomery, J., Müldner, G., McLaughlin, R. L., Teasdale, M. D., Van Rheenen, W., Veldink, J. H., van den Berg, L. H., Hardiman, O., Carroll, M., Roskams, S., Oxley, J., Morgan, C., Thomas, M. G., Barnes, I., McDonnell, C., Collins, M. J. & 1 others, , 2016, In: Nature Communications. 7, 8 p., 10326.Research output: Contribution to journal › Journal article › Research › peer-review
The effects of demineralisation and sampling point variability on the measurement of glutamine deamidation in type I collagen extracted from bone
Simpson, J. P., Penkman, K. E. H., Demarchi, B., Koon, H., Collins, Matthew James, Thomas-Oates, J., Shapiro, B., Stark, M. & Wilson, J., 2016, In: Journal of Archaeological Science. 69, p. 29-38 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
Barcoding the largest animals on Earth: ongoing challenges and molecular solutions in the taxonomic identification of ancient cetaceans
Speller, C., Van Den Hurk, Y., Charpentier, A., Rodrigues, A., Gardeisen, A., Wilkens, B., McGrath, K., Rowsell, K., Spindler, L., Collins, Matthew James & Hofreiter, M., 2016, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 371, 1702, 11 p., 20150332.Research output: Contribution to journal › Review › Research › peer-review
Provenancing archaeological wool textiles from medieval northern Europe by light stable isotope analysis (δ13C, δ15N, δ2H)
Von Holstein, I. C. C., Rogers, P. W., Craig, O. E., Penkman, K. E. H., Newton, J. & Collins, Matthew James, 2016, In: PLoS ONE. 11, 10, 27 p., e0162330.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Palaeoproteomic evidence identifies archaic hominins associated with the Châtelperronian at the Grotte du Renne
Welker, Frido, Hajdinjak, M., Talamo, S., Jaouen, K., Dannemann, M., David, F., Julien, M., Meyer, M., Kelso, J., Barnes, I., Brace, S., Kamminga, P., Fischer, R., Kessler, B. M., Stewart, J. R., Pääbo, S., Collins, Matthew James & Hublin, J., 2016, In: Proceedings of the National Academy of Sciences of the United States of America. 113, 40, p. 11162-11167 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 166038088
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Screening archaeological bone for palaeogenetic and palaeoproteomic studies
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Protein sequences bound to mineral surfaces persist into deep time
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A 5700 year-old human genome and oral microbiome from chewed birch pitch
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