Matthew James Collins
Professor
Section for Geobiology
Øster Farimagsgade 5, bygning 7, 1353 København K
- 2020
- Published
Histological study of sheep skin transformation during the recreation of historical parchment manufacture
Fourneau, M., Canon, C., Van Vlaender, D., Collins, Matthew James, Fiddyment, S., Poumay, Y. & Deparis, O., 2020, In: Heritage Science. 8, 1, 7 p., 78.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
How to get your goat: automated identification of species from MALDI-ToF spectra
Hickinbotham, S., Fiddyment, S., Stinson, T. L. & Collins, Matthew James, 2020, In: Bioinformatics. 36, 12, p. 3719-3725 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rapid loss of endogenous DNA in pig bone buried in five different environments
Eriksen, A. M. H., Matthiesen, H., Kontopoulos, I., Gregory, D., Snoeck, C., KU, thw266, Collins, Matthew James & Gilbert, M Thomas P, 2020, In: Archaeometry. 62, 4, p. 827-846 20 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Saving Bones: a direct comparison of FTIR-ATR, whole bone percent nitrogen, and NIR
Ryder, C. M., Sponheimer, M., Shokry, Hussein, Lazagabaster, I. A., Marom, N., Monnier, G. F., Collins, Matthew James, Deviese, T. & Higham, T., 2020, p. 243-243.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
- Published
The biomolecular characterization of a finger ring contextually dated to the emergence of the Early Neolithic from Syltholm, Denmark
Jensen, Theis Zetner Trolle, Mackie, Meaghan, Taurozzi, Alberto John, Lanigan, Liam Thomas, Gundelach, C., Olsen, J., Sørensen, S. A., Collins, Matthew James, Sørensen, Mikkel & Schroeder, Hannes, 2020, In: Royal Society Open Science. 7, 1, 16 p., 191172.Research output: Contribution to journal › Journal article › Research › peer-review
- 2019
- Published
Identifying Archaeological Bone via Non-Destructive ZooMS and the Materiality of Symbolic Expression: Examples from Iroquoian Bone Points
McGrath, K., Rowsell, K., St-Pierre, C. G., Tedder, A., Foody, G., Roberts, C., Speller, C. & Collins, Matthew James, 30 Jul 2019, In: Scientific Reports. 9, 10 p., 11027.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient cattle genomics, origins, and rapid turnover in the Fertile Crescent
Verdugo, M. P., Mullin, V. E., Scheu, A., Mattiangeli, V., Daly, K. G., Delser, P. M., Hare, A. J., Burger, J., Collins, M. J., Kehati, R., Hesse, P., Fulton, D., Sauer, E. W., Mohaseb, F. A., Davoudi, H., Khazaeli, R., Lhuillier, J., Rapin, C., Ebrahimi, S., Khasanov, M. & 21 others, , 1 Jan 2019, In: Science. 365, 6449, p. 173-176 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A 5700 year-old human genome and oral microbiome from chewed birch pitch
Jensen, T. Z. T., Niemann, J., Iversen, K. H., Fotakis, A. K., Gopalakrishnan, S., Vågene, Å. J., Pedersen, M. W., Sinding, M-H. S., Ellegaard, M. R., Allentoft, M. E., Lanigan, L. T., Taurozzi, A. J., Nielsen, S. H., Dee, M. W., Mortensen, M. N., Christensen, M. C., Sørensen, S. A., Collins, M. J., Gilbert, M. T. P., Sikora, M. & 2 others, , 2019, In: Nature Communications. 10, 10 p., 5520.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Analysis of faecal substrates sheds light into coprostanol origin, preservation and diagenesis
Sistiaga Gutierrez, Maria Ainara, Poyet, M., Groussin, M., Collins, Matthew James & Summons, R. E., 2019, 29th International Meeting on Organic Geochemistry. European Association of Geoscientists and Engineers, p. 1-2 (Conference Proceedings, Vol. 2019).Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research › peer-review
- Published
Ancient amino acids from fossil feathers in amber
McCoy, V. E., Gabbott, S. E., Penkman, K., Collins, Matthew James, Presslee, S., Holt, J., Grossman, H., Wang, B., Kraemer, M. M. S., Delclòs, X. & Peñalver, E., 2019, In: Scientific Reports. 9, 8 p., 6420.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bone diagenesis in a Mycenaean secondary burial (Kastrouli, Greece)
Kontopoulos, I., Penkman, K., Liritzis, I. & Collins, Matthew James, 2019, In: Archaeological and Anthropological Sciences. 11, 10, p. 5213-5230Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Enamel proteome shows that Gigantopithecus was an early diverging pongine
Welker, Frido, Ramos Madrigal, Jazmin, Kuhlwilm, M., Liao, W., Gutenbrunner, P., de Manuel, M., Samodova, D., Mackie, Meaghan, Allentoft, Morten Erik, Bacon, A., Collins, Matthew James, Cox, J., Lalueza-Fox, C., Olsen, Jesper Velgaard, Demeter, Fabrice, Wang, W., Marques-Bonet, T. & Cappellini, Enrico, 2019, In: Nature. 576, p. 262-265Research output: Contribution to journal › Journal article › Research › peer-review
Ionisation bias undermines the use of matrix-assisted laser desorption/ionisation for estimating peptide deamidation: synthetic peptide studies demonstrate electrospray ionisation gives more reliable response ratios
Simpson, J. P., Fascione, M., Bergström, E., Wilson, J., Collins, Matthew James, Penkman, K. E. H. & Thomas-Oates, J., 2019, In: Rapid Communications in Mass Spectrometry. 33, 12, p. 1049-1057 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Medieval women's early involvement in manuscript production suggested by lapis lazuli identification in dental calculus
Radini, A., Tromp, M., Beach, A., Tong, E., Speller, C., McCormick, M., Dudgeon, J. V., Collins, Matthew James, Rühli, F., Kröger, R. & Warinner, C., 2019, In: Science Advances. 26, 2, 9 p., eaau7126.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
New insights into Neolithic milk consumption through proteomic analysis of dental calculus
Charlton, S., Ramsøe, Abigail Daisy, Collins, Matthew James, Craig, O., Fischer, R., Alexander, M. & Speller, C., 2019, In: Archaeological and Anthropological Sciences. 11, 11, p. 6183-6196 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Palaeoproteomics resolves sloth relationships
Presslee, S., Slater, G. J., Pujos, F., Forasiepi, A. M., Fischer, R., Molloy, K., Mackie, M., Olsen, J. V., Kramarz, A., Taglioretti, M., Scaglia, F., Lezcano, M., Lanata, J. L., Southon, J., Feranec, R., Bloch, J., Hajduk, A., Martin, F. M., Salas Gismondi, R., Reguero, M. & 6 others, , 2019, In: Nature Ecology & Evolution. 3, p. 1121-1130Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Petrous bone diagenesis: a multi-analytical approach
Kontopoulos, I., Penkman, K., McAllister, G. D., Lynnerup, Niels, Damgaard, P. B., Hansen, H. B., Allentoft, Morten Erik & Collins, Matthew James, 2019, In: Palaeogeography, Palaeoclimatology, Palaeoecology. 518, p. 143-154 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
So you want to do biocodicology? A field guide to the biological analysis of parchment
Fiddyment, S., Teasdale, M. D., Vnouček, J., Lévêque, É., Binois, A. & Collins, Matthew James, 2019, In: Heritage Science. 7, 10 p., 35.Research output: Contribution to journal › Review › Research › peer-review
- 2018
- Published
Ancient proteins from ceramic vessels at Çatalhöyük West reveal the hidden cuisine of early farmers
Hendy, J., Colonese, A. C., Franz, I., Fernandes, R., Fischer, R., Orton, D., Lucquin, A., Spindler, L., Anvari, J., Stroud, E., Biehl, P. F., Speller, C., Boivin, N., Mackie, Meaghan, Jersie-Christensen, R. R., Olsen, Jesper Velgaard, Collins, Matthew James, Craig, O. E. & Rosenstock, E., 1 Dec 2018, In: Nature Communications. 9, 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Preparation of bone powder for FTIR-ATR analysis: The particle size effect
Kontopoulos, Ioannis, Presslee, S., Penkman, K. & Collins, Matthew James, 1 Nov 2018, In: Vibrational Spectroscopy. 99, p. 167-177Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A guide to ancient protein studies
Hendy, J., Welker, Frido, Demarchi, B., Speller, C., Warinner, C. & Collins, Matthew James, 2018, In: Nature Ecology & Evolution. 2, p. 791-799 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient goat genomes reveal mosaic domestication in the Fertile Crescent
Daly, K. G., Maisano Delser, P., Mullin, V. E., Scheu, A., Mattiangeli, V., Teasdale, M. D., Hare, A. J., Burger, J., Verdugo, M. P., Collins, M. J., Kehati, R., Erek, C. M., Bar-oz, G., Pompanon, F., Cumer, T., Çakırlar, C., Mohaseb, A. F., Decruyenaere, D., Davoudi, H., Çevik, Ö. & 20 others, , 2018, In: Science. 361, 6397, p. 85-88Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Collagen proteins exchange oxygen with demineralisation and gelatinisation reagents and also with atmospheric moisture
von Holstein, I. C. C., von Tersch, M., Coutu, A. N., Penkman, K. E. H., Makarewicz, C. A. & Collins, Matthew James, 2018, In: Rapid Communications in Mass Spectrometry. 32, 6, p. 523-534 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comment on "Ecological niche of Neanderthals from Spy Cave revealed by nitrogen isotopes of individual amino acids in collagen" [J. Hum. Evol. 93 (2016) 82-90]
O'Connell, T. C. & Collins, Matthew James, 2018, In: Journal of Human Evolution. 117, p. 53-55 3 p.Research output: Contribution to journal › Editorial › Research › peer-review
- Published
Diagenesis of archaeological bone and tooth
Kendall, C., Eriksen, A. M. H., Kontopoulos, I., Collins, Matthew James & Turner-Walker, G., 2018, In: Palaeogeography, Palaeoclimatology, Palaeoecology - An International Journal for the Geo-Sciences. 491, p. 21-37 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exaggerated expectations in ancient starch research and the need for new taphonomic and authenticity criteria
Mercader, J., Akeju, T., Brown, M., Bundala, M., Collins, Matthew James, Copeland, L., Crowther, A., Dunfield, P., Henry, A., Inwood, J., Itambu, M., Kim, J., Larter, S., Longo, L., Oldenburg, T., Patalano, R., Sammynaiken, R., Soto, M., Tyler, R. & Xhauflair, H., 2018, In: Facets. 3, p. 777-798 22 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Proteomic evidence of dietary sources in ancient dental calculus
Hendy, J., Warinner, C., Bouwman, A., Collins, Matthew James, Fiddyment, S., Fischer, R., Hagan, R., Hofman, C. A., Holst, M., Chaves, E., Klaus, L., Larson, G., Mackie, Meaghan, McGrath, K., Mundorff, A. Z., Radini, A., Rao, H., Trachsel, C., Velsko, I. M. & Speller, C. F., 2018, In: Proceedings of the Royal Society B: Biological Sciences. 285, 1883, 977.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Species identification using ZooMS, with reference to the exploitation of animal resources in the medieval town of Odense
Brandt, Luise Ørsted, Haase, K. & Collins, Matthew James, 2018, In: Danish Journal of Archaeology. 7, 2, p. 139-153Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Stone Age “chewing gum” yields 5,700 yearold human genome and oral microbiome
Jensen, Theis Zetner Trolle, Niemann, Jonas, Iversen, K. H., Fotaki, Anna Katerina, Gopalakrishan, S., Sinding, Mikkel Holger Strander, Ellegaard, M. R., Allentoft, Morten Erik, Lanigan, Liam Thomas, Taurozzi, Alberto John, Nielsen, Sofie Holtsmark, Dee, M. W., Mortensen, M. N., Christensen, M. C., Sørensen, S. A., Collins, Matthew James, Gilbert, M Thomas P, Sikora, Martin, Rasmussen, Simon & Schroeder, Hannes, 2018, bioRxiv, 32 p.Research output: Working paper › Preprint › Research
- 2017
- Published
The dental calculus metabolome in modern and historic samples
Velsko, I. M., Overmyer, K. A., Speller, C., Klaus, L., Collins, Matthew James, Loe, L., Frantz, L. A. F., Sankaranarayanan, K., Lewis, C. M., Martinez, J. B. R., Chaves, E., Coon, J. J., Larson, G. & Warinner, C., Nov 2017, In: Metabolomics. 13, 11, 17 p., 134.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The York Gospels: a 1000-year biological palimpsest
Teasdale, M. D., Fiddyment, S., Vnouček, J., Mattiangeli, V., Speller, C., Binois, A., Carver, M., Dand, C., Newfield, T. P., Webb, C. C., Bradley, D. G. & Collins, Matthew James, 25 Oct 2017, In: Royal Society Open Science. 4, 10, 11 p., 170988.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Preservation of the metaproteome: variability of protein preservation in ancient dental calculus
Mackie, Meaghan, Hendy, J., Ramsøe, Abigail Daisy, Sperduti, A., Holst, M., Collins, Matthew James & Speller, C. F., 11 Aug 2017, In: STAR: Science & Technology of Archaeological Research. 3, 1, p. 74-86 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
New criteria for the molecular identification of cereal grains associated with archaeological artefacts
Colonese, A. C., Hendy, J., Lucquin, A., Speller, C. F., Collins, Matthew James, Carrer, F., Gubler, R., Kühn, M., Fischer, R. & Craig, O. E., 26 Jul 2017, In: Scientific Reports. 7, 7 p., 6633.Research output: Contribution to journal › Journal article › Research › peer-review
Multiple Microanalyses of a Sample from the Vinland Map
Sommer, D. V. P., Mühlen Axelsson, K., Collins, Matthew James, Fiddyment, S., Bredal-Jørgensen, J., Simonsen, K. P., Lauridsen, C. B. & Larsen, R., Apr 2017, In: Archaeometry. 59, 2, p. 287-301Research output: Contribution to journal › Journal article › Research › peer-review
Variations in glutamine deamidation for a Châtelperronian bone assemblage as measured by peptide mass fingerprinting of collagen
Welker, Frido, Soressi, M. A., Roussel, M., van Riemsdijk, I., Hublin, J. & Collins, Matthew James, 4 Jan 2017, In: STAR: Science & Technology of Archaeological Research. 3, 1, p. 15-27 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
Aspartic acid racemization: Applications to forensic and archaeological age estimation
Griffin, R. C. & Collins, Matthew James, 1 Jan 2017, Mechanisms Linking Aging, Diseases and Biological Age Estimation. Zapico, S. C. (ed.). CRC Press, p. 47-56 10 p.Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
The identification of archaeological eggshell using peptide markers
Presslee, S., Wilson, J., Woolley, J., Best, J., Russell, D., Radini, A., Fischer, R., Kessler, B., Boano, R., Collins, Matthew James & Demarchi, B., 2017, In: STAR: Science & Technology of Archaeological Research. 3, 1, p. 89-99 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2016
A mass spectrometry method for the determination of the species of origin of gelatine in foods and pharmaceutical products
Grundy, H. H., Reece, P., Buckley, M., Solazzo, C. M., Dowle, A. A., Ashford, D., Charlton, A. J., Wadsley, M. K. & Collins, Matthew James, 2016, In: Food Chemistry. 190, p. 276-284 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
Barcoding the largest animals on Earth: ongoing challenges and molecular solutions in the taxonomic identification of ancient cetaceans
Speller, C., Van Den Hurk, Y., Charpentier, A., Rodrigues, A., Gardeisen, A., Wilkens, B., McGrath, K., Rowsell, K., Spindler, L., Collins, Matthew James & Hofreiter, M., 2016, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 371, 1702, 11 p., 20150332.Research output: Contribution to journal › Review › Research › peer-review
Finding Britain's last hunter-gatherers: a new biomolecular approach to ‘unidentifiable’ bone fragments utilising bone collagen
Charlton, S., Alexander, M., Collins, Matthew James, Milner, N., Mellars, P., O'Connell, T. C., Stevens, R. E. & Craig, O. E., 2016, In: Journal of Archaeological Science. 73, p. 55-61 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
Genomic signals of migration and continuity in Britain before the Anglo-Saxons
Martiniano, R., Caffell, A., Holst, M., Hunter-Mann, K., Montgomery, J., Müldner, G., McLaughlin, R. L., Teasdale, M. D., Van Rheenen, W., Veldink, J. H., van den Berg, L. H., Hardiman, O., Carroll, M., Roskams, S., Oxley, J., Morgan, C., Thomas, M. G., Barnes, I., McDonnell, C., Collins, M. J. & 1 others, , 2016, In: Nature Communications. 7, 8 p., 10326.Research output: Contribution to journal › Journal article › Research › peer-review
Mapping the Elephants of the 19th Century East African Ivory Trade with a Multi-Isotope Approach
Coutu, A. N., Lee-Thorp, J., Collins, Matthew James & Lane, P. J., 2016, In: PLoS ONE. 11, 10, 23 p., e0163606.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Palaeoproteomic evidence identifies archaic hominins associated with the Châtelperronian at the Grotte du Renne
Welker, Frido, Hajdinjak, M., Talamo, S., Jaouen, K., Dannemann, M., David, F., Julien, M., Meyer, M., Kelso, J., Barnes, I., Brace, S., Kamminga, P., Fischer, R., Kessler, B. M., Stewart, J. R., Pääbo, S., Collins, Matthew James & Hublin, J., 2016, In: Proceedings of the National Academy of Sciences of the United States of America. 113, 40, p. 11162-11167 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
Poor preservation of antibodies in archaeological human bone and dentine
Kendall, R., Hendy, J., Collins, Matthew James, Millard, A. R. & Gowland, R. L., 2016, In: Science and Technology of Archaeological Research. 2, 1, p. 15-24 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Protein sequences bound to mineral surfaces persist into deep time
Demarchi, B., Hall, S., Roncal-Herrero, T., Freeman, C. L., Woolley, J., Crisp, M. K., Wilson, J., Fotakis, A. K., Fischer, R., Kessler, B. M., Jersie-Christensen, R. R., Olsen, J. V., Haile, J., Thomas, J., Marean, C. W., Parkington, J., Presslee, S., Lee-Thorp, J., Ditchfield, P., Hamilton, J. F. & 16 others, , 2016, In: eLife. 5, 50 p., e17092.Research output: Contribution to journal › Journal article › Research › peer-review
Provenancing archaeological wool textiles from medieval northern Europe by light stable isotope analysis (δ13C, δ15N, δ2H)
Von Holstein, I. C. C., Rogers, P. W., Craig, O. E., Penkman, K. E. H., Newton, J. & Collins, Matthew James, 2016, In: PLoS ONE. 11, 10, 27 p., e0162330.Research output: Contribution to journal › Journal article › Research › peer-review
Technological Analysis of the World's Earliest Shamanic Costume: A Multi-Scalar, Experimental Study of a Red Deer Headdress from the Early Holocene Site of Star Carr, North Yorkshire, UK
Little, A., Elliott, B., Conneller, C., Pomstra, D., Evans, A. A., Fitton, L. C., Holland, A., Davis, R., Kershaw, R., O'Connor, S., O'Connor, T., Sparrow, T., Wilson, A. S., Jordan, P., Collins, M. J., Colonese, A. C., Craig, O. E., Knight, R., Lucquin, A. J. A., Taylor, B. & 1 others, , 2016, In: PLoS ONE. 11, 4, 10 p., e0152136.Research output: Contribution to journal › Journal article › Research › peer-review
The challenge of identifying tuberculosis proteins in archaeological tissues
Hendy, J., Collins, Matthew James, Teoh, K. Y., Ashford, D. A., Thomas-Oates, J., Donoghue, H. D., Pap, I., Minnikin, D. E., Spigelman, M. & Buckley, M., 2016, In: Journal of Archaeological Science. 66, p. 146-153 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
The effects of demineralisation and sampling point variability on the measurement of glutamine deamidation in type I collagen extracted from bone
Simpson, J. P., Penkman, K. E. H., Demarchi, B., Koon, H., Collins, Matthew James, Thomas-Oates, J., Shapiro, B., Stark, M. & Wilson, J., 2016, In: Journal of Archaeological Science. 69, p. 29-38 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
Using combined biomolecular methods to explore whale exploitation and social aggregation in hunter-gatherer-fisher society in Tierra del Fuego
Evans, S., Godino, I. B. I., Álvarez, M., Rowsell, K., Collier, P., de Goodall, R. N. P., Mulville, J., Lacrouts, A., Collins, Matthew James & Speller, C., 2016, In: Journal of Archaeological Science: Reports. 6, p. 757-767 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 166038088
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Screening archaeological bone for palaeogenetic and palaeoproteomic studies
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
316
downloads
Protein sequences bound to mineral surfaces persist into deep time
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
254
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A 5700 year-old human genome and oral microbiome from chewed birch pitch
Research output: Contribution to journal › Journal article › Research › peer-review
Published