Rasmus Nielsen

Rasmus Nielsen

Professor


  1. 1994
  2. Published

    Intracellular calcium modulates basolateral K(+)-permeability in frog skin epithelium

    Larsen, Birger Brodin, Rytved, K. A. & Nielsen, Rasmus, 1994, In: Pflügers Archiv - European Journal of Physiology. 426, 1-2, p. 171-3 3 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. 1996
  4. Published

    An increase in [Ca2+]i activates basolateral chloride channels and inhibits apical sodium channels in frog skin epithelium

    Larsen, Birger Brodin, Rytved, K. A. & Nielsen, Rasmus, 1996, In: Pflügers Archiv - European Journal of Physiology. 433, 1-2, p. 16-25 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. 1997
  6. Site-by-site estimation of the rate of substitution and the correlation of rates in mitochondrial DNA

    Nielsen, Rasmus, 1 Jan 1997, In: Systematic Biology. 46, 2, p. 346-353 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Robustness of the Estimator of the Index of Dispersion for DNA Sequences

    Nielsen, Rasmus, 1 Jun 1997, In: Molecular Phylogenetics and Evolution. 7, 3, p. 346-351 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. 1998
  9. Maximum-likelihood estimation of population divergence times and population phylogeny in models without mutation

    Nielsen, Rasmus, Mountain, J. L., Huelsenbeck, J. P. & Slatkin, M., 1 Jan 1998, In: Evolution. 52, 3, p. 669-677 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Taxon sampling and the accuracy of large phylogenies

    Rannala, B., Huelsenbeck, J. P., Yang, Z. & Nielsen, Rasmus, 1 Jan 1998, In: Systematic Biology. 47, 4, p. 702-710 9 p.

    Research output: Contribution to journalReviewResearchpeer-review

  11. Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene

    Nielsen, Rasmus & Yang, Z., 1 Mar 1998, In: Genetics. 148, 3, p. 929-936 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Synonymous and nonsynonymous rate variation in nuclear genes of mammals

    Yang, Z. & Nielsen, Rasmus, 23 Apr 1998, In: Journal of Molecular Evolution. 46, 4, p. 409-418 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. 1999
  14. Changes in ds/dn in the HIV-1 env Gene

    Nielsen, Rasmus, 1999, In: MOLECULAR BIOLOGY AND EVOLUTION . 16, 5, p. 711-714 4 p.

    Research output: Contribution to journalLetterResearchpeer-review

  15. Effect of nonindependent substitution on phylogenetic accuracy

    Huelsenbeck, J. P. & Nielsen, Rasmus, 1999, In: Systematic Biology. 48, 2, p. 317-328 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Evidence for a Na+/Ca2+ exchange mechanism in frog skin epithelium

    Madsen, K. H., Larsen, Birger Brodin & Nielsen, Rasmus, 1999, In: Pflügers Archiv - European Journal of Physiology. 437, 2, p. 175-81 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Single-Locus Tests of Microsatellite Evolution: Multi-Step Mutations and Constraints on Allele Size

    Nielsen, Rasmus & Palsbøll, P. J., 1999, In: Molecular Phylogenetics and Evolution. 11, 3, p. 477-484 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. The molecular clock is gone but not forgotten: What about Molecular Clocks? Symposium at the Annual Meeting of the Society for the Study of Evolution (SSE), Madison, Wisconsin, USA, 22-26 June 1999

    Nielsen, Rasmus, 1999, In: Trends in Genetics. 15, 11, p. 442-443 2 p.

    Research output: Contribution to journalConference articleResearchpeer-review

  19. Variation in the pattern of nucleotide substitution across sites

    Huelsenbeck, J. P. & Nielsen, Rasmus, 1999, In: Journal of Molecular Evolution. 48, 1, p. 86-93 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. 2001
  21. Distinguishing Migration From Isolation: A Markov Chain Monte Carlo Approach

    Nielsen, Rasmus & Wakeley, J., 2001, In: Genetics. 158, 2, p. 885-896 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. The discovery of Single-Nucleotide Polymorphisms: and Inferences about Human Demographic History

    Wakeley, J., Nielsen, Rasmus, Liu-Cordero, S. N. & Ardlie, K., 2001, In: American Journal of Human Genetics. 69, 6, p. 1332-1347 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. 2002
  24. Bayesian estimation of the number of inversions in the history of two chromosomes

    York, T. L., Durrett, R. & Nielsen, Rasmus, 1 Dec 2002, In: Journal of Computational Biology. 9, 6, p. 805-818 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. 2003
  26. Correcting for ascertainment biases when analyzing SNP data: applications to the estimation of linkage disequilibrium

    Nielsen, Rasmus & Signorovitch, J., 2003, In: Theoretical Population Biology. 63, 3, p. 245-255 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Positive Selection in the Human Genome Inferred from Human-Chimp-Mouse Orthologous Gene Alignments

    Clark, A. G., Glanowski, S., Nielsen, Rasmus, Thomas, P., Kejariwal, A., Todd, M. J., Tanenbaum, D. M., Civello, D., Lu, F., Murphy, B., Ferriera, S., Wang, G., Zheng, X., White, T. J., Sninsky, J. J., Adams, M. D. & Cargill, M., 2003, In: Cold Spring Harbor Symposia on Quantitative Biology. 68, 1, p. 479-486 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. 2004
  29. Published

    Adaptive evolution of cytochrome c oxidase: Infrastructure for a carnivorous plant radiation

    Jobson, R. W., Nielsen, Rasmus, Laakkonen, L., Wikström, M. & Albert, V. A., 2004, In: Proceedings of the National Academy of Sciences of the United States of America. 101, 52, p. 18064-18068 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. 2005
  31. Published

    A Scan for Positively Selected Genes in the Genomes of Humans and Chimpanzees

    Nielsen, Rasmus, Bustamente, C., Clark, A. G., Glanowski, S., Sackton, T. B., Hubisz, M. J., Fledel-Alon, A., Tanenbaum, D. M., Civello, D., White, T. J., Sninsky, J. J., Adams, M. D. & Cargill, M., 2005, In: PLoS - Biology. 3, 6, p. e170

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    A likelihood ratio test for species membership based on DNA sequence data

    Matz, M. V. & Nielsen, Rasmus, 2005, In: Philosophical Transactions of the Royal Society of London. Biological Sciences. 360, 1462, p. 1969-1974

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    Ascertainment bias in studies of human genome-wide polymorphism

    Clark, A. G., Hubisz, M. J., Bustamente, C. D., Williamson, S. H. & Nielsen, Rasmus, 2005, In: Genome Research. 15, 11, p. 1496-1502

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    Bayes Empirical Bayes Inference of Amino Acid Sites Under Positive Selection

    Yang, Z., Wong, W. S. W. & Nielsen, Rasmus, 2005, In: Molecular Biology and Evolution. 22, 4, p. 1107-1118

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published

    Bayesian and maximum likelihood estimation of genetic maps

    York, T. L., Durrett, R. T., Tanksley, S. & Nielsen, Rasmus, 2005, In: Genetics Research. 85, 2, p. 159-168

    Research output: Contribution to journalJournal articleResearchpeer-review

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