Rasmus Nielsen

Rasmus Nielsen

Professor


  1. 2017
  2. Published

    A hidden Markov model approach for simultaneously estimating local ancestry and admixture time using next generation sequence data in samples of arbitrary ploidy

    Corbett-Detig, R. & Nielsen, Rasmus, 3 Jan 2017, In: PLoS Genetics. 13, 1, 40 p., e1006529.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Genome-wide signatures of complex introgression and adaptive evolution in the big cats

    Figueiró, H. V., Li, G., Trindade, F. J., Assis, J., Pais, F., Fernandes, G., Santos, S. H. D., Hughes, G. M., Komissarov, A., Antunes, A., Trinca, C. S., Rodrigues, M. R., Linderoth, T., Bi, K., Silveira, L., Azevedo, F. C. C., Kantek, D., Ramalho, E., Brassaloti, R. A., Villela, P. M. S. & 13 others, Nunes, A. L. V., Teixeira, R. H. F., Morato, R. G., Loska, D., Saragüeta, P., Gabaldón, T., Teeling, E. C., O'Brien, S. J., Nielsen, Rasmus, Coutinho, L. L., Oliveira, G., Murphy, W. J. & Eizirik, E., 1 Jan 2017, In: Science Advances. 3, 7, 13 p., e1700299.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published

    Archaic adaptive introgression in TBX15/WARS2

    Racimo, Fernando, Gokhman, D., Fumagalli, M., Ko, A., Hansen, Torben, Moltke, Ida, Albrechtsen, Anders, Carmel, L., Huerta-Sánchez, E. & Nielsen, Rasmus, 2017, In: Molecular Biology and Evolution. 34, 3, p. 509-524 16 p., msw283.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. 2016
  6. Published

    Genomic analyses inform on migration events during the peopling of Eurasia

    Pagani, L., Lawson, D. J., Jagoda, E., Moerseburg, A., Eriksson, A., Mitt, M., Clemente, F., Hudjashov, G., DeGiorgio, M., Saag, L., Wall, J. D., Cardona, A., Maegi, R., Sayres, M. A. W., Kaewert, S., Inchley, C., Scheib, C. L., Jaerve, M., Karmin, M., Jacobs, G. S. & 78 others, Antao, T., Iliescu, F. M., Kushniarevich, A., Ayub, Q., Tyler-Smith, C., Xue, Y., Yunusbayev, B., Tambets, K., Mallick, C. B., Saag, L., Pocheshkhova, E., Andriadze, G., Muller, C. E., Westaway, M. C., Lambert, D. M., Zoraqi, G., Turdikulova, S., Dalimova, D., Sabitov, Z., Sultana, G. N. N., Lachance, J., Tishkoff, S., Momynaliev, K., Isakova, J., Damba, L. D., Gubina, M., Nymadawa, P., Evseeva, I., Atramentova, L., Utevska, O., Ricaut, F., Brucato, N., Sudoyo, H., Letellier, T., Cox, M. P., Barashkov, N. A., Škaro, V., Mulahasanovic, L., Primorac, D., Sahakyan, H., Mormina, M., Eichstaedt, C. A., Lichman, D. V., Abdullah, S., Chaubey, G., Wee, J. T. S., Mihailov, E., Karunas, A., Litvinov, S., Khusainova, R., Ekomasova, N., Akhmetova, V., Khidiyatova, I., Marjanovi, D., Yepiskoposyan, L., Behar, D. M., Balanovska, E., Metspalu, A., Derenko, M., Malyarchuk, B., Voevoda, M., Fedorova, S. A., Osipova, L. P., Mirazon, M., Gerbault, P., Leavesley, M., Migliano, A. B., Petraglia, M., Balanovsky, O., Khusnutdinova, E. K., Metspalu, E., Thomas, M. G., Manica, A., Nielsen, Rasmus, Villems, R., Willerslev, Eske, Kivisild, T. & Metspalu, M., 13 Oct 2016, In: Nature. 538, 7624, p. 238-242 5 p.

    Research output: Contribution to journalLetterResearchpeer-review

  7. Published

    The power of inbreeding: NGS-based GWAS of rice reveals convergent evolution during rice domestication

    Wang, H., Xu, X., Vieira, Filipe Garrett, Xiao, Y., Li, Z., Wang, J., Nielsen, Rasmus & Chu, C., 6 Jul 2016, In: Molecular Plant. 9, 7, p. 975-985 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    The genetic cost of Neanderthal introgression

    Harris, K. & Nielsen, Rasmus, Jun 2016, In: Genetics (Online). 203, 2, p. 881-891 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    A genomic history of aboriginal Australia

    Malaspinas, A. S., Westaway, M. C., Muller, C. E., Sousa, V. C., Lao, O., Alves, I., Bergström, A., Athanasiadis, G., Cheng, J. Y., Crawford, J. E., Heupink, T. H., Macholdt, E., Peischl, S., Rasmussen, S., Schiffels, S., Subramanian, S., Wright, J. L., Albrechtsen, A., Barbieri, C., Dupanloup, I. & 55 others, Eriksson, A., Margaryan, Ashot, Moltke, Ida, Pugach, I., Korneliussen, Thorfinn Sand, Levkivskyi, I. P., Moreno Mayar, J. Víctor, Ni, S., Racimo, F., Sikora, Martin, Xue, Y., Aghakhanian, F. A., Brucato, N., Brunak, Søren, Campos, P., Clark, W., Ellingvåg, S., Fourmile, G., Gerbault, P., Injie, D., Koki, G., Leavesley, M., Logan, B., Lynch, A., Matisoo-Smith, E. A., McAllister, P. J., Mentzer, A. J., Metspalu, M., Migliano, A. B., Murgha, L., Phipps, M. E., Pomat, W., Reynolds, D., Ricaut, F., Siba, P., Thomas, M. G., Wales, T., Wall, C. M., Oppenheimer, S. J., Tyler-Smith, C., Durbin, R., Dortch, J., Manica, A., Schierup, M. H., Foley, R. A., Lahr, M. M., Bowern, C., Wall, J. D., Mailund, T., Stoneking, M., Nielsen, Rasmus, Sandhu, M. S., Excoffier, L., Lambert, D. M. & Willerslev, Eske, 2016, In: Nature. 538, 7624, p. 207-214 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Detecting recent selective sweeps while controlling for mutation rate and background selection

    Huber, C. D., DeGiorgio, M., Hellmann, I. & Nielsen, Rasmus, 2016, In: Molecular Ecology. 25, 1, p. 142-156 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Estimating IBD tracts from low coverage NGS data

    Vieira, Filipe Garrett, Albrechtsen, Anders & Nielsen, Rasmus, 2016, In: Bioinformatics. 32, 14, p. 2096-2102 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Evolution of GOUNDRY, a cryptic subgroup of Anopheles gambiae s.l., and its impact on susceptibility to Plasmodium infection

    Crawford, J. E., Riehle, M. M., Markianos, K., Bischoff, E., Guelbeogo, W. M., Gneme, A., Sagnon, N., Vernick, K. D., Nielsen, Rasmus & Lazzaro, B. P., 2016, In: Molecular Ecology. 25, 7, p. 1494-1510 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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