Rasmus Nielsen

Rasmus Nielsen

Professor


  1. 2021
  2. Published

    Assessing Uncertainty in the Rooting of the SARS-CoV-2 Phylogeny

    Pipes, L., Wang, H., Huelsenbeck, J. P. & Nielsen, Rasmus, 2021, In: Molecular Biology and Evolution. 38, 4, p. 1537-1543 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Convergent evolution of increased urine-concentrating ability in desert mammals

    Rocha, J. L., Brito, J. C., Nielsen, Rasmus & Godinho, R., 2021, In: Mammal Review. 51, 4, p. 482-491 10 p.

    Research output: Contribution to journalReviewResearchpeer-review

  4. Disentangling selection on genetically correlated polygenic traits via whole-genome genealogies

    Stern, A. J., Speidel, L., Zaitlen, N. A. & Nielsen, Rasmus, 2021, In: American Journal of Human Genetics. 108, 2, p. 219-239 21 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Human-Mediated Admixture and Selection Shape the Diversity on the Modern Swine (Sus scrofa) Y Chromosomes

    Ai, H., Zhang, M., Yang, B., Goldberg, A., Li, W., Ma, J., Brandt, D., Zhang, Z., Nielsen, Rasmus & Huang, L., 2021, In: Molecular Biology and Evolution. 38, 11, p. 5051-5065 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Inferring Adaptive Introgression Using Hidden Markov Models

    Svedberg, J., Shchur, V., Reinman, S., Nielsen, Rasmus & Corbett-Detig, R., 2021, In: Molecular Biology and Evolution. 38, 5, p. 2152-2165 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Investigate the origins of COVID-19

    Bloom, J. D., Chan, Y. A., Baric, R. S., Bjorkman, P. J., Cobey, S., Deverman, B. E., Fisman, D. N., Gupta, R., Iwasaki, A., Lipsitch, M., Medzhitov, R., Neher, R. A., Nielsen, Rasmus, Patterson, N., Stearns, T., van Nimwegen, E., Worobey, M. & Relman, D. A., 2021, In: Science. 372, 6543, p. 694 1 p.

    Research output: Contribution to journalLetterResearchpeer-review

  8. Published

    Life in Deserts: The Genetic Basis of Mammalian Desert Adaptation

    Rocha, J. L., Godinho, R., Brito, J. C. & Nielsen, Rasmus, 2021, In: Trends in Ecology & Evolution. 36, 7, p. 637-650

    Research output: Contribution to journalReviewResearchpeer-review

  9. Published

    Synonymous mutations and the molecular evolution of SARS-CoV-2 origins

    Wang, H., Pipes, L. & Nielsen, Rasmus, 2021, In: Virus Evolution. 7, 1, 11 p., veaa098.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. The CALeDNA program: Citizen scientists and researchers inventory California's biodiversity

    Meyer, R. S., Ramos, M. M., Lin, M., Schweizer, T. M., Gold, Z., Ramos, D. R., Shirazi, S., Kandlikar, G., Kwan, W. Y., Curd, E. E., Freise, A., Parker, J. M., Sexton, J. P., Wetzer, R., Pentcheff, N. D., Wall, A. R., Pipes, L., Garcia- Vedrenne, A., Mejia, M. P., Moore, T. & 12 others, Orland, C., Ballare, K. M., Worth, A., Beraut, E., Aronson, E. L., Nielsen, Rasmus, Lewin, H. A., Barber, P. H., Wall, J., Kraft, N., Shapiro, B. & Wayne, R. K., 2021, In: California Agriculture. 75, 1, p. 20-32 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. The distribution of waiting distances in ancestral recombination graphs

    Deng, Y., Song, Y. S. & Nielsen, Rasmus, 2021, In: Theoretical Population Biology. 141, p. 34-43 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. The genomics of mimicry: Gene expression throughout development provides insights into convergent and divergent phenotypes in a Müllerian mimicry system

    Stuckert, A. M. M., Chouteau, M., McClure, M., LaPolice, T. M., Linderoth, T., Nielsen, Rasmus, Summers, K. & MacManes, M. D., 2021, In: Molecular Ecology. 30, 16, p. 4039-4061 23 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    The history and evolution of the Denisovan-EPAS1 haplotype in Tibetans

    Zhang, X., Witt, K. E., Banuelos, M. M., Ko, A., Yuan, K., Xu, S., Nielsen, Rasmus & Huerta-Sanchez, E., 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 22, 9 p., 2020803118.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published

    Whole-genome sequence analysis unveils different origins of European and Asiatic mouflon and domestication-related genes in sheep

    Chen, Z., Xu, Y., Xie, X., Wang, D., Aguilar-Gómez, D., Liu, G., Li, X., Esmailizadeh, A., Rezaei, V., Kantanen, J., Ammosov, I., Nosrati, M., Periasamy, K., Coltman, D. W., Lenstra, J. A., Nielsen, Rasmus & Li, M., 2021, In: Communications Biology . 4, 15 p., 1307.

    Research output: Contribution to journalJournal articleResearchpeer-review

ID: 3311