Shyam Gopalakrishnan

Shyam Gopalakrishnan

Associate Professor

  • Section for Evolutionary Genomics

    Øster Farimagsgade 5, 1353 København K, 7, Building: 7.218

    Phone: +45 35 33 60 57Mobile: +45 29 70 08 49

Publication year:
  1. 2021
  2. Published

    Dire wolves were the last of an ancient New World canid lineage

    Perri, A. R., Mitchell, K. J., Mouton, A., Alvarez-Carretero, S., Hulme-Beaman, A., Haile, James Seymour, Jamieson, A., Meachen, J., Lin, A. T., Schubert, B. W., Ameen, C., Antipina, E. E., Bover, P., Brace, S., Carmagnini, A., Carøe, Christian, Samaniego Castruita, J. A., Chatters, J. C., Dobney, K., dos Reis, M., Evin, A., Gaubert, P., Gopalakrishnan, Shyam, Gower, Graham, Heiniger, H., Helgen, K. M., Kapp, J., Kosintsev, P. A., Linderholm, A., Ozga, A. T., Presslee, S., Salis, A. T., Saremi, N. F., Shew, C., Skerry, K., Taranenko, D. E., Thompson, M., Sablin, M. V., Kuzmin, Y. V., Collins, Matthew James, Sinding, M. S., Gilbert, M Thomas P, Stone, A. C., Shapiro, B., Van Valkenburgh, B., Wayne, R. K., Larson, G., Cooper, A. & Frantz, L. A. F., 2021, In : Nature. 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. 2020
  4. Published

    Influence of past climate change on phylogeography and demographic history of narwhals, Monodon monoceros

    Louis, Marie Georgette Yolande J, Skovrind, Mikkel, Samaniego Castruita, J. A., Garilao, C., Kaschner, K., Gopalakrishnan, Shyam, Haile, James Seymour, Lydersen, C., Kovacs, K. M., Garde, E., Heide-Jørgensen, M. P., Postma, L., Ferguson, S. H., Willerslev, Eske & Lorenzen, Eline, 29 Apr 2020, In : Proceedings. Biological sciences. 287, 1925, 9 p., 20192964.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Adapting Genotyping-by-Sequencing and Variant Calling for Heterogeneous Stock Rats

    Gileta, A. F., Gao, J., Chitre, A. S., Bimschleger, H., St Pierre, C. L., Gopalakrishnan, Shyam & Palmer, A. A., 2020, In : G3: Genes, Genomes, Genetics (Bethesda). 10, 7, p. 2195-2205 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Arctic-adapted dogs emerged at the Pleistocene-Holocene transition

    Sinding, Mikkel Holger Strander, Gopalakrishnan, Shyam, Ramos Madrigal, Jazmin, de Manuel, M., Pitulko, V. V., Kuderna, L., Feuerborn, Tatiana Richtman, Frantz, L. A. F., Vieira, F. G., Niemann, Jonas, Samaniego Castruita, J. A., Carøe, Christian, Andersen-Ranberg, Emilie Ulrikka, Jordan, P. D., Pavlova, E. Y., Nikolskiy, P. A., Kasparov, A. K., Ivanova, V. V., Willerslev, Eske, Skoglund, P., Fredholm, Merete, Wennerberg, S. E., Heide-Jørgensen, M. P., Dietz, R., Sonne, C., Meldgaard, Morten, Dalén, L., Larson, G., Petersen, Bent, Sicheritz-Pontén, Thomas, Bachmann, L., Wiig, Ø., Marques-Bonet, T., Hansen, Anders Johannes & Gilbert, M Thomas P, 2020, In : Science (New York, N.Y.). 368, 6498, p. 1495-1499 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Genomes of Pleistocene Siberian Wolves Uncover Multiple Extinct Wolf Lineages

    Ramos Madrigal, Jazmin, Sinding, M. S., Carøe, Christian, Mak, Sarah Siu Tze, Niemann, J., Samaniego Castruita, J. A., Fedorov, S., Kandyba, A., Germonpré, M., Bocherens, H., Feuerborn, Tatiana Richtman, Pitulko, V. V., Pavlova, E. Y., Nikolskiy, P. A., Kasparov, A. K., Ivanova, V. V., Larson, G., Frantz, L. A. F., Willerslev, Eske, Meldgaard, Morten, Petersen, Bent, Sicheritz-Pontén, Thomas, Bachmann, L., Wiig, Ø., Hansen, Anders Johannes, Gilbert, M Thomas P & Gopalakrishnan, Shyam, 2020, In : Current biology : CB. 31, p. 198-206

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Genomic Adaptations and Evolutionary History of the Extinct Scimitar-Toothed Cat, Homotherium latidens

    Barnett, R., Westbury, Michael Vincent, Sandoval-Velasco, Marcela, Vieira, F. G., Jeon, S., Zazula, G., Martin, M. D., Ho, S. Y. W., Mather, N., Gopalakrishnan, Shyam, Ramos Madrigal, Jazmin, de Manuel, M., Zepeda-Mendoza, M. L., Antunes, A., Baez, A. C., De Cahsan, Binia, Larson, G., O’Brien, S. J., Eizirik, E., Johnson, W. E., Koepfli, K., Wilting, A., Fickel, J., Dalén, L., Lorenzen, Eline, Marques-Bonet, T., Hansen, Anders Johannes, Zhang, Guojie, Bhak, J., Yamaguchi, N. & Gilbert, M Thomas P, 2020, In : Current Biology. 30, p. 5018-5025

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Holo-Omics: Integrated Host-Microbiota Multi-omics for Basic and Applied Biological Research

    Jessen, Lasse Nyholm, Koziol, Adam Leslie, Marcos, S., qrf142, qrf142, Aizpurua, O., Gopalakrishnan, Shyam, Limborg, Morten Tønsberg, Gilbert, M Thomas P & Alberdi Estibaritz, Antton, 2020, In : iScience. 23, 8, p. 1-16 101414.

    Research output: Contribution to journalReviewResearchpeer-review

  10. Published

    Interspecific Gene Flow and the Evolution of Specialization in Black and White Rhinoceros

    Moodley, Y., Westbury, M., Russo, I. M., Gopalakrishnan, Shyam, Rakotoarivelo, A., Olsen, R., Prost, S., Tunstall, T., Ryder, O. A., Dalen, L. & Bruford, M. W., 2020, In : MOLECULAR BIOLOGY AND EVOLUTION . 37, 11, p. 3105-3117 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Multi-omic detection of Mycobacterium leprae in archaeological human dental calculus

    Fotaki, Anna Katerina, Denham, S. D., Mackie, Meaghan, Iraeta Orbegozo, Miren, Mylopotamitaki, D., Gopalakrishnan, Shyam, Sicheritz-Pontén, Thomas, Olsen, Jesper Velgaard, Cappellini, Enrico, Zhang, Guojie, Christophersen, A., Gilbert, M Thomas P & Vågene, Åshild Joanne, 2020, In : Philosophical Transactions of the Royal Society B: Biological Sciences. 375, 1812, 10 p., 20190584.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Plasmodium vivax Malaria Viewed through the Lens of an Eradicated European Strain

    van Dorp, L., Gelabert, P., Rieux, A., de Manuel, M., de-Dios, T., Gopalakrishnan, Shyam, Carøe, Christian, Sandoval-Velasco, Marcela, Fregel, R., Olalde, I., Escosa, R., Aranda, C., Huijben, S., Mueller, I., Marques-Bonet, T., Balloux, F., Gilbert, M Thomas P & Lalueza-Fox, C., 2020, In : MOLECULAR BIOLOGY AND EVOLUTION . 37, 3, p. 773-785 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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