Simon Rasmussen

Simon Rasmussen

Associate professor, group leader, Professor

ORCID: 0000-0001-6323-9041

Publication year:
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11 - 20 out of 110Page size: 10
  1. 2012
  2. Published

    Multilocus sequence typing of total-genome-sequenced bacteria

    Larsen, Mette Vang, Cosentino, S., Rasmussen, Simon, Friis, Carsten, Hasman, H., Marvig, R. L., Jelsbak, L., Sicheritz-Pontén, T., Ussery, D. W., Aarestrup, F. M. & Lund, O., Apr 2012, In: Journal of Clinical Microbiology. 50, 4, p. 1355-61 7 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. 2013

  4. Complete genes may pass from food to human blood

    Spisák, S., Solymosi, N., Ittzés, P., Bodor, A., Kondor, D., Vattay, G., Barták, B. K., Sipos, F., Galamb, O., Tulassay, Z., Szállási, Z., Rasmussen, Simon, Sicheritz-Ponten, T., Brunak, Søren, Molnár, B. & Csabai, I., 2013, In: PloS one. 8, 7, p. e69805

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. Published

    Genome-scale cold stress response regulatory networks in ten Arabidopsis thaliana ecotypes

    Barah, P., Jayavelu, N. D., Rasmussen, Simon, Nielsen, H. B., Mundy, J. & Bones, A. M., 2013, In: B M C Genomics. 14, 16 p., 722 .

    Research output: Contribution to journal › Journal article › Research › peer-review

  6. Published

    Metagenomic species profiling using universal phylogenetic marker genes

    Sunagawa, S., Mende, D. R., Zeller, G., Izquierdo-Carrasco, F., Berger, S. A., Kultima, J. R., Coelho, L. P., Arumugam, M., Tap, J., Nielsen, H. B., Rasmussen, S., Brunak, S., Pedersen, O. B., Guarner, F., de Vos, W. M., Wang, J., Li, J., Doré, J., Ehrlich, S. D., Stamatakis, A. & 1 others, Bork, P., 2013, In: Nature Methods. 10, 12, p. 1196-1199 4 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. Published

    Richness of human gut microbiome correlates with metabolic markers

    Le Chatelier, E., Nielsen, T., Qin, J., Prifti, E., Hildebrand, F., Falony, G., Almeida, M., Arumugam, M., Batto, J-M., Kennedy, S., Leonard, P., Li, J., Burgdorf, K. S., Grarup, N., Jørgensen, T., Brandslund, I., Nielsen, H. B., Juncker, A., dos Santos, M. B. Q., Levenez, F. & 62 others, Pons, N., Rasmussen, Simon, Sunagawa, S., Tap, J., Tims, S., Zoetendal, E. G., Brunak, S., Clément, K., Doré, J., Kleerebezem, M., Kristiansen, Karsten, Renault, P., Sicheritz-Ponten, T., de Vos, W. M., Zucker, J., Raes, J., Hansen, Torben, Bork, P., Wang, J., Ehrlich, S. D., Pedersen, Oluf Borbye, Guedon, E., Delorme, C., Layec, S., Khaci, G., van de Guchte, M., Vandemeulebrouck, G., Jamet, A., Dervyn, R., Sanchez, N., Maguin, E., Haimet, F., Winogradski, Y., Cultrone, A., Leclerc, M., Juste, C., Blottière, H., Pelletier, E., LePaslier, D., Artiguenave, F., Bruls, T., Weissenbach, J., Turner, K., Parkhill, J., Antolin, M., Manichanh, C., Casellas, F., Boruel, N., Varela, E., Torrejon, A., Guarner, F., Denariaz, G., Derrien, M., van Hylckama Vlieg, J. E. T., Veiga, P., Oozeer, R., Knol, J., Rescigno, M., Brechot, C., Mérieux, A., M'Rini, C. & Yamada, T., 2013, In: Nature. 500, 7464, p. 541-546 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  8. Targeted metabolic engineering guided by computational analysis of single-nucleotide polymorphisms (SNPs)

    Udatha, D. B. R. K. G., Rasmussen, Simon, Sicheritz-Pontén, T. & Panagiotou, G., 2013, In: Methods in molecular biology (Clifton, N.J.). 985, p. 409-28 20 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Bacterial natural transformation by highly fragmented and damaged DNA

    Overballe-Petersen, S., Harms, K., Orlando, L. A. A., Moreno Mayar, J. Víctor, Rasmussen, Simon, Dahl, Tais Wittchen, Rosing, Minik Thorleif, Poole, A. M., Sicheritz-Ponten, T., Brunak, S., Inselmann, S., de Vries, J., Wackernagel, W., Pybus, O. G., Nielsen, Rasmus, Johnsen, P. J., Nielsen, K. M. & Willerslev, Eske, 3 Dec 2013, In: Proceedings of the National Academy of Sciences of the United States of America. 110, 49, p. 19860–19865 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. 2014
  11. Published

    A selective sweep on a deleterious mutation in CPT1A in Arctic populations

    Clemente, F. J., Cardona, A., Inchly, C. E., Peters, B. M., Jacobs, G., Pagani, L., Lawson, D. J., Añtao, T., Vicente, M., Mitt, M., DiGiorgio, M., Faltyskova, Z., Xue, Y., Ayub, Q., Szpak, M., Mägi, R., Eriksson, A., Manica, A., Raghavan, M., Rasmussen, M. & 10 others, Rasmussen, Simon, Willerslev, Eske, Vidal-Puig, A., Tyler-Smith, C., Willems, R., Nielsen, R., Metspalu, M., Malyarchuk, B., Derenko, M. & Kivisild, T., 2014, In: American Journal of Human Genetics. 95, 5, p. 584-589 6 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Benchmarking of methods for genomic taxonomy

    Larsen, M. V., Cosentino, S., Lukjancenko, O., Saputra, D., Rasmussen, Simon, Hasman, H., Sicheritz-Pontén, T., Aarestrup, F. M., Ussery, D. W. & Lund, O., 2014, In: Journal of Clinical Microbiology. 52, 5, p. 1529-39 11 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. Published

    Derived immune and ancestral pigmentation alleles in a 7,000-year-old Mesolithic European

    Olalde, I., Allentoft, M. E., Sánchez-Quinto, F., Santpere, G., Chiang, C. W. K., DiGeorgio, M., Prado-Martínez, J., Rodríguez Pérez, J. A., Rasmussen, S., Quilez, J., Ramírez, O., Marigorta, U. M., Fernández-Callejo, M., Prada, M. E., Encinas, J. M. V., Nielsen, R., Netea, M. G., Novembre, J., Sturm, R. A., Sabeti, P. & 4 others, Marquès-Bonet, T., Navarro, A., Willerslev, Eske & Lalueza-Fox, C., 2014, In: Nature. 507, 7491, p. 225-228 4 p.

    Research output: Contribution to journal › Letter › Research › peer-review

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ID: 204201681