Simon Rasmussen
Associate professor, group leader, Professor
Rasmussen Group
Blegdamsvej 3B, Building: 06-2-24
2200 København N
Rasmussen Group
Metagenomic analysis of rapid gravity sand filter microbial communities suggests novel physiology of Nitrospira spp
Palomo, A., Jane Fowler, S., Gülay, A., Rasmussen, Simon, Sicheritz-Ponten, T. & Smets, B. F., Nov 2016, In: I S M E Journal. 10, 11, p. 2569-2581 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Metagenomic species profiling using universal phylogenetic marker genes
Sunagawa, S., Mende, D. R., Zeller, G., Izquierdo-Carrasco, F., Berger, S. A., Kultima, J. R., Coelho, L. P., Arumugam, M., Tap, J., Nielsen, H. B., Rasmussen, S., Brunak, S., Pedersen, O. B., Guarner, F., de Vos, W. M., Wang, J., Li, J., Doré, J., Ehrlich, S. D., Stamatakis, A. & 1 others, , 2013, In: Nature Methods. 10, 12, p. 1196-1199 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
Microbial community structure of Arctic multiyear sea ice and surface seawater by 454 sequencing of the 16S RNA gene
Bowman, J. S., Rasmussen, Simon, Blom, N., Deming, J. W., Rysgaard, S. & Sicheritz-Ponten, T., Jan 2012, In: I S M E Journal. 6, 1, p. 11-20 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multilocus sequence typing of total-genome-sequenced bacteria
Larsen, Mette Vang, Cosentino, S., Rasmussen, Simon, Friis, Carsten, Hasman, H., Marvig, R. L., Jelsbak, L., Sicheritz-Pontén, T., Ussery, D. W., Aarestrup, F. M. & Lund, O., Apr 2012, In: Journal of Clinical Microbiology. 50, 4, p. 1355-61 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Noninvasive proteomic biomarkers for alcohol-related liver disease
Niu, Lili, Thiele, M., Geyer, P. E., Rasmussen, D. N., Webel, Henry, Santos, A., Gupta, R., Meier, F., Strauss, Maximilian, Kjaergaard, M., Lindvig, K., Jacobsen, S., Rasmussen, Simon, Hansen, Torben, Krag, A. & Mann, Matthias, 2022, In: Nature Medicine. 28, 6, p. 1277-1287 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Novel variation and de novo mutation rates in population-wide de novo assembled Danish trios
Besenbacher, S., Liu, S., Gonzalez-Izarzugaza, J. M., Grove, J., Belling, K. G., Bork-Jensen, J., Huang, S., Als, T. D., Li, S., Yadav, R., Rubio García, A., Lescai, F., Demontis, D., Rao, J., Ye, W., Mailund, T., Møllegaard Friborg, R., Pedersen, C. N. S., Xu, R., Sun, J. & 27 others, , 2015, In: Nature Communications. 6, 9 p., 5969.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Origins and genetic legacies of the Caribbean Taino
Schroeder, H., Sikora, M., Gopalakrishnan, S., Cassidy, L. M., Delserc, P. M., Velasco, M. S., Schraiber, J. G., Rasmussen, S., Homburger, J. R., Avila-Arcos, M. C., Allentoft, M. E., Moreno Mayar, J. V., Renaud, G., Gomez-Carballa, A., Laffoon, J. E., Hopkins, R. J. A., Higham, T. F. G., Carr, R. S., Schaffer, W. C., Day, J. S. & 7 others, , 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 10, p. 2341-2346 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Paleogenomic insights into the red complex bacteria Tannerella forsythia in Pre-Hispanic and Colonial individuals from Mexico
Bravo-Lopez, M., Villa-Islas, V., Rocha Arriaga, C., Villasenor-Altamirano, A. B., Guzman-Solis, A., Sandoval-Velasco, M., Wesp, J. K., Alcantara, K., Lopez-Corral, A., Gomez-Valdes, J., Mejia, E., Herrera, A., Meraz-Moreno, A., Moreno-Cabrera, M. D. L. L., Moreno-Estrada, A., Nieves-Colon, M. A., Olvera, J., Perez-Perez, J., Iversen, K. H., Rasmussen, S. & 3 others, , 2020, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 375, 1812, 13 p., 20190580.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Physiological and Genetic Adaptations to Diving in Sea Nomads
Ilardo, M. A., Moltke, Ida, Korneliussen, Thorfinn Sand, Cheng, J., Stern, A. J., Racimo, Fernando, Damgaard, P. D. B., Sikora, Martin, Seguin-Orlando, A., Rasmussen, Simon, van den Munckhof, I. C. L., ter Horst, R., Joosten, L. A. B., Netea, M. G., Salingkat, S., Nielsen, Rasmus & Willerslev, Eske, 2018, In: Cell. 173, 3, p. 569-580 12 p., e15.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Population Genomics of Stone Age Eurasia
Allentoft, M. E., Sikora, M., Refoyo-Martínez, A., Irving-Pease, E. K., Fischer, A., Barrie, W., Ingason, A., Stenderup, J., Sjögren, K-G., Pearson, A., Mota, B., Paulsson, B. S., Halgren, A., Macleod, R., Schjellerup Jørkov, M. L., Demeter, F., Novosolov, M., Sørensen, L., Nielsen, P-O., Henriksen, R. H. A. & 143 others, , 2022, p. 1-71, (bioRxiv).Research output: Working paper › Preprint › Research
ID: 204201681
Most downloads
-
1365
downloads
Genome-scale cold stress response regulatory networks in ten Arabidopsis thaliana ecotypes
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
607
downloads
Bifidobacterium bifidum actively changes the gene expression profile induced by Lactobacillus acidophilus in murine dendritic cells
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
433
downloads
Discovery, genotyping and characterization of structural variation and novel sequence at single nucleotide resolution from de novo genome assemblies on a population scale
Research output: Contribution to journal › Journal article › Research › peer-review
Published