Tom Gilbert

Tom Gilbert

Professor

Member of:


    1. 2014
    2. Published

      Optimization of DNA recovery and amplification from non-carbonized archaeobotanical remains

      Wales, N., Andersen, K., Cappellini, Enrico, Avila Arcos, M. D. C. & Gilbert, M Thomas P, 2014, In: PLOS ONE. 9, 1, 14 p., e86827.

      Research output: Contribution to journalJournal articleResearchpeer-review

    3. Published

      Pathogens and host immunity in the ancient human oral cavity

      Warinner, C., Rodrigues, J. F. M., Vyas, R., Trachsel, C., Shved, N., Grossmann, J., Radini, A., Hancock, Y., Tito, R. Y., Fiddyment, S., Speller, C., Hendy, J., Charlton, S., Luder, H. U., Salazar-García, D. C., Eppler, E., Seiler, R., Hansen, L. H., Samaniego Castruita, J. A., Barkow-Oesterreicher, S. & 12 others, Teoh, K. Y., Kelstrup, C., Olsen, Jesper Velgaard, Nanni, P., Kawai, T., Willerslev, Eske, von Mering, C., Lewis, C. M., Collins, M. J., Gilbert, M Thomas P, Rühli, F. & Cappellini, Enrico, 2014, In: Nature Genetics. 46, p. 336-344 9 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    4. Published

      Persistence of the mitochondrial lineage responsible for the Irish potato famine in extant New World Phytophthora infestans

      Martin, M. D., Ho, S. Y. W., Wales, N., Ristaino, J. B. & Gilbert, M Thomas P, 2014, In: Molecular Biology and Evolution. 31, 6, p. 1414-1420 7 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    5. Published

      Prehistoric genomes reveal the genetic foundation and cost of horse domestication

      Schubert, M., Jónsson, H., Chang, D., Der Sarkissian, C., Ermini, L., Ginolhac, A., Albrechtsen, A., Dupanloup, I., Foucal, A., Petersen, B., Fumagalli, M., Raghavan, M., Seguin-Orlando, A., Korneliussen, T. S., Velazquez, A. M. V., Stenderup, J., Hoover, C. A., Rubin, C-J., Alfarhan, A. H., Alquraishi, S. A. & 15 others, Al-Rasheid, K. A. S., MacHugh, D. E., Kalbfleisch, T., MacLeod, J. N., Rubin, E. M., Sicheritz-Ponten, T., Andersson, L., Hofreiter, M., Marques-Bonet, T., Gilbert, M Thomas P, Nielsen, R., Excoffier, L., Willerslev, Eske, Shapiro, B. & Orlando, L. A. A., 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 52, p. E5661–E5669 9 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    6. Published

      Resolution of the type material of the Asian elephant, Elephas maximus Linnaeus, 1758 (Proboscidea, Elephantidae)

      Cappellini, Enrico, Gentry, A., Palkopoulou, E., Ishida, Y., Cram, D., Roos, A., Watson, M., Johansson, U. S., Fernholm, B., Agnelli, P., Barbagli, F., Littlewood, D. T. J., Kelstrup, C., Olsen, Jesper Velgaard, Lister, A. M., Roca, A. L., Dalén, L. & Gilbert, M Thomas P, 2014, In: Zoological Journal of the Linnean Society. 170, 1, p. 222-232 11 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    7. Published

      Second generation sequencing and morphological faecal analysis reveal unexpected foraging behaviour by Myotis nattereri (Chiroptera, Vespertilionidae) in winter

      Hope, P. R., Bohmann, Kristine, Gilbert, M Thomas P, Zepeda Mendoza, M. L., Razgour, O. & Jones, G., 2014, In: Frontiers in Zoology. 11, 15 p., 39.

      Research output: Contribution to journalJournal articleResearchpeer-review

    8. Published

      Speciation and demographic history of Atlantic eels (Anguilla anguilla and A. rostrata) revealed by mitogenome sequencing

      Jacobsen, M. W., Pujolar, J. M., Gilbert, M Thomas P, Moreno Mayar, J. Víctor, Bernatchez, L., Als, T. D., Lobon-Cervia, J. & Hansen, M. M., 2014, In: Heredity. 113, p. 432-442 11 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    9. Published

      Storytelling and story testing in domestication

      Gerbault, P., Allaby, R. G., Boivin, N., Rudzinski, A., Grimaldi, I. M., Pires, J. C., Climer Vigueira, C., Dobney, K., Gremillion, K. J., Barton, L., Arroyo-Kalin, M., Purugganan, M. D., Rubio de Casas, R., Bollongino, R., Burger, J., Fuller, D. Q., Bradley, D. G., Balding, D. J., Richerson, P. J., Gilbert, M. T. P. & 2 others, Larson, G. & Thomas, M. G., 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 17, p. 6159-6164 6 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    10. Published

      The genetic prehistory of the New World Arctic

      Raghavan, M., DeGiorgio, M., Albrechtsen, A., Moltke, I., Skoglund, P., Korneliussen, T. S., Grønnow, B., Appelt, M., Gulløv, H. C., Friesen, T. M., Fitzhugh, W., Malmström, H. S., Rasmussen, S., Olsen, J., Melchior, L. C., Fuller, B. T., Fahrni, S. M., Stafford jr., T., Grimes, V., Renouf, M. A. P. & 36 others, Cybulski, J., Lynnerup, Niels, Lahr, M. M., Britton, K., Knecht, R., Arneborg, J., Metspalu, M., Cornejo, O. E., Malaspinas, A. S., Wang, Y., Rasmussen, M., Raghavan, V., Hansen, Thomas van Overeem, Khusnutdinova, E., Pierre, T. L., Dneprovsky, K., Andreasen, C., Lange, H., Hayes, M. G., Coltrain, J., Spitsyn, V. A., Götherström, A., Orlando, L. A. A., Kivisild, T., Villems, R., Crawford, M. H., Nielsen, Finn Cilius, Dissing, J., Heinemeier, J., Meldgaard, Morten, Bustamante, C., O'Rourke, D. H., Jakobsson, M., Gilbert, M Thomas P, Nielsen, R. & Willerslev, Eske, 2014, In: Science. 345, 6200, 9 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    11. Published

      The microbiome of New World vultures

      Roggenbuck, M., Schnell, I. B., Blom, N., Bælum, J., Bertelsen, M. F., Sicheritz-Pontén, T., Sørensen, Søren Johannes, Gilbert, M Thomas P, Graves, G. R. & Hansen, L. H., 2014, In: Nature Communications. 5, 7 p., 5498.

      Research output: Contribution to journalJournal articleResearchpeer-review

    12. Published

      The origin and emergence of an HIV-1 epidemic: from introduction to endemicity

      Bruhn, C. A. W., Audelin, A. M., Helleberg, Marie, Bjorn-Mortensen, K., Obel, Niels, Gerstoft, Jan, Nielsen, C., Melbye, M., Medstrand, P., Gilbert, M Thomas P & Esbjörnsson, J., 2014, In: AIDS (London, England). 28, 7, p. 1031-1040 10 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    13. Published

      Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment

      Li, C., Zhang, Y., Li, J., Kong, L., Hu, H., Pan, H., Xu, L., Deng, Y., Li, Q., Jin, L., Yu, H., Chen, Y., Liu, B., Yang, L., Liu, S., Zhang, Y., Lang, Y., Xia, J., He, W., Shi, Q. & 21 others, Subramanian, S., Millar, C. D., Meader, S., Rands, C. M., Fujita, M. K., Greenwold, M. J., Castoe, T. A., Pollock, D. D., Gu, W., Nam, K., Ellegren, H., Ho, S. Y., Burt, D. W., Ponting, C. P., Jarvis, E. D., Gilbert, M Thomas P, Yang, H., Wang, J., Lambert, D. M., Wang, J. & KU, thw266, 2014, In: GigaScience. 3, 27, 15 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    14. Published

      Whole-genome analyses resolve early branches in the tree of life of modern birds

      Jarvis, E. D., Mirarab, S., Aberer, A. J., Li, B., Houde, P., Li, C., Ho, S. Y. W., Faircloth, B. C., Nabholz, B., Howard, J. T., Suh, A., Weber, C. C., Rodrigues da Fonseca, R. A., Li, J., Zhang, F., Li, H., Zhou, L., Narula, N., Liu, L., Ganapathy, G. & 85 others, Boussau, B., Bayzid, M. S., Zavidovych, V., Subramanian, S., Gabaldón, T., Capella-Gutiérrez, S., Huerta-Cepas, J., Rekepalli, B., Terkelsen, K. M., Schierup, M. H., Lindow, Bent Erik Kramer, Warren, W. C., Ray, D., Green, R. E., Bruford, M. W., Zhan, X., Dixon, A., Li, S., Li, N., Huang, Y., Derryberry, E. P., Bertelsen, Mads Frost, Sheldon, F. H., Brumfield, R. T., Mello, C. V., Lovell, P. V., Wirthlin, M., Schneider, M. P. C., Prosdocimi, F., Samaniego Castruita, J. A., Velazquez, A. M. V., Alfaro Nuñez, L. A., Campos, P., Petersen, Bent, Sicheritz-Ponten, T., Pas, A., Bailey, T., Scofield, P., Bunce, M., Lambert, D. M., Zhou, Q., Perelman, P., Driskell, A. C., Shapiro, B., Xiong, Z., Zeng, Y., Liu, S., Li, Z., Liu, B., Wu, K., Xiao, J., Yinqi, X., Zheng, Q., Zhang, Y., Yang, H., Wang, J., Smeds, L., Rheindt, F. E., Braun, M., Fjeldså, Jon, Orlando, L. A. A., Barker, F. K., Jønsson, Knud Andreas, Johnson, W., Koepfli, K. P., O'Brien, S., Haussler, D., Ryder, O. A., Rahbek, Carsten, Willerslev, Eske, Graves, G. R., Glenn, T. C., McCormack, J., Burt, D., Ellegren, H., Alström, P., Edwards, S. V., Stamatakis, A., Mindell, D. P., Cracraft, J., Braun, E. L., Warnow, T., Wang, J., Gilbert, M Thomas P & KU, thw266, 2014, In: Science. 346, 6215, p. 1320-1331 12 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    15. Published

      Yersinia pestis: one pandemic, two pandemics, three pandemics, more?

      Gilbert, M Thomas P, Apr 2014, In: The Lancet Infectious Diseases. 14, 4, p. 264-265 2 p.

      Research output: Contribution to journalComment/debateResearch

    16. Published

      Validation of a sensitive PCR assay for the detection of Chelonid fibropapilloma-associated herpesvirus in latent turtle infections

      Alfaro Nuñez, L. A. & Gilbert, M Thomas P, Sep 2014, In: Journal of Virological Methods. 206, p. 38-41 4 p.

      Research output: Contribution to journalLetterResearchpeer-review

    17. Published

      The lectotype for the Asian elephant, Elephas maximus Linnaeus, 1758 (Mammalia, Proboscidea) and comments on `primary, secondary and tertiary syntypes' and `virtual lectotype designation'

      Gentry, A., Lister, A. M., Roos, A., Gilbert, M Thomas P & Cappellini, Enrico, 1 Sep 2014, In: Bulletin of Zoological Nomenclature. 71, 3, 6 p.

      Research output: Contribution to journalJournal articleCommunication

    18. 2015
    19. Published

      A common genetic origin for early farmers from Mediterranean Cardial and Central European LBK cultures

      Olalde, I., Schroeder, Hannes, Sandoval-Velasco, Marcela, Vinner, Lasse, Lobón, I., Ramirez, O., Civit, S., Borja, P. G., Salazar-García, D. C., Talamo, S., Fullola, J. M., Oms, F. X., Pedro, M., Martínez, P., Sanz, M., Daura, J., Zilhão, J., Marquès-Bonet, T., Gilbert, M Thomas P & Lalueza-Fox, C., 2015, In: Molecular Biology and Evolution. 32, 12, p. 3132-3142 11 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    20. Published

      A refined model of the genomic basis for phenotypic variation in vertebrate hemostasis

      Ribeiro, Â. M., Zepeda Mendoza, M. L., Bertelsen, Mads Frost, Kristensen, Annemarie T., Jarvis, E. D., Gilbert, M Thomas P & Rodrigues da Fonseca, Rute Andreia, 2015, In: B M C Evolutionary Biology. 15, 8 p., 124.

      Research output: Contribution to journalJournal articleResearchpeer-review

    21. Published

      Ancient DNA unravels the truth behind the controversial GUS Greenlandic Norse fur samples: the bison was a horse, and the muskox and bears were goats

      Sinding, Mikkel Holger Strander, Arneborg, J., Nyegaard, G. & Gilbert, M Thomas P, 2015, In: Journal of Archaeological Science. 53, p. 297-303 7 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    22. Published

      Ancient and modern environmental DNA

      Pedersen, Mikkel Winther, Overballe-Petersen, S., Ermini, L., Der Sarkissian, C., Haile, James Seymour, Hellström, A. M., Spens, J., Thomsen, P. F., Bohmann, Kristine, Cappellini, Enrico, Schnell, I. B., Wales, N., Carøe, C., Campos, P., Schmidt, A. M. Z., Gilbert, M Thomas P, Hansen, Anders Johannes, Orlando, L. A. A. & Willerslev, Eske, 2015, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 370, 1660, 11 p., 20130383.

      Research output: Contribution to journalReviewResearchpeer-review

    23. Published

      Ancient genomics

      Der Sarkissian, C., Allentoft, M. E., Avila Arcos, M. D. C., Barnett, R., Campos, P. F., Cappellini, E., Ermini, L., Fernandez Garcia, R., Rodrigues da Fonseca, R. A., Ginolhac, A., Hansen, A. J., Jónsson, H., Korneliussen, T. S., Margaryan, A., Martin, M. D., Moreno Mayar, J. V., Raghavan, M., Rasmussen, M., Sandoval Velasco, M., Schroeder, H. & 6 others, Schubert, Mikkel, Seguin-Orlando, A., Wales, N., Gilbert, M Thomas P, Willerslev, Eske & Orlando, L. A. A., 2015, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 370, 1660, 12 p., 20130387.

      Research output: Contribution to journalReviewResearchpeer-review

    24. Published

      Ancient mitochondrial DNA from the northern fringe of the Neolithic farming expansion in Europe sheds light on the dispersion process

      Malmström, H., Linderholm, A., Skoglund, P., Storå, J., Sjödin, P., Gilbert, M Thomas P, Holmlund, G., Willerslev, Eske, Jakobsson, M., Lidén, K. & Götherström, A., 2015, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 370, 10 p., 20130373.

      Research output: Contribution to journalJournal articleResearchpeer-review

    25. Published

      Avianbase: a community resource for bird genomics

      Eöry, L., Gilbert, M Thomas P, Li, C., Li, B., Archibald, A., Aken, B. L., KU, thw266, Jarvis, E., Flicek, P. & Burt, D. W., 2015, In: Genome Biology (Online Edition). 16, 4 p., 21.

      Research output: Contribution to journalLetterResearchpeer-review

    26. Published

      Bird sequencing project takes off

      KU, thw266, Rahbek, Carsten, Graves, G. R., Jarvis, E. D. & Gilbert, M Thomas P, 2015, In: Nature. 522, 7554, p. 34 1 p.

      Research output: Contribution to journalComment/debateResearchpeer-review

    27. Published

      Comparative performance of two whole-genome capture methodologies on ancient DNA Illumina libraries

      Avila Arcos, M. D. C., Sandoval-Velasco, Marcela, Schroeder, Hannes, Carpenter, M. L., Malaspinas, A. S., Wales, N., Peñaloza, F., Bustamante, C. D. & Gilbert, M Thomas P, 2015, In: Methods in Ecology and Evolution. 6, 6, p. 725-734 10 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

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    ID: 12980