Tom Gilbert

Tom Gilbert

Professor

Member of:

    ORCID: 0000-0002-5805-7195

    Publication year:
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    1 - 50 out of 441Page size: 50
    1. 2002
    2. Published

      Characterization of genetic miscoding lesions caused by postmortem damage

      Gilbert, M Thomas P, Hansen, Anders Johannes, Willerslev, Eske, Rudbeck, L., Barnes, I., Cooper, A. & Lynnerup, Niels, 2002, In: American Journal of Human Genetics. 72, 1, p. 48-61 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      Distribution patterns of postmortem damage in human mitochondrial DNA

      Gilbert, M Thomas P, Willerslev, Eske, Hansen, Anders Johannes, Barnes, I., Rudbeck, L., Lynnerup, Niels & Cooper, A., 2002, In: American Journal of Human Genetics. 72, 1, p. 32-47 15 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. Published

      The genetic origins of the Andaman Islanders

      Endicott, P., Gilbert, M Thomas P, Stringer, C., Lalueza-Fox, C., Willerslev, Eske, Hansen, Anders Johannes & Cooper, A., 2002, In: American Journal of Human Genetics. 72, 1, p. 178-84 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. 2003
    6. Published

      Diverse plant and animal genetic records from Holocene and Pleistocene sediments

      Willerslev, Eske, Hansen, Anders Johannes, Binladen, J., Brand, T. B., Gilbert, M Thomas P, Shapiro, B., Bunce, M., Wiuf, C., Gilichinsky, D. A. & Cooper, A., 2003, In: Science. 300, 5620, p. 791-5

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. 2004
    8. Published

      Abscence of Yersinia pestis-specific dna in human teeth from five European excavations of putative plague victims

      Gilbert, M Thomas P, Cuccui, J., White, W., Lynnerup, Niels, Titball, R., Cooper, A. & Prentice, M., 2004, In: Microbiology. 150, 2, p. 341-354

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Ancient mito-chondria DNA from hair

      Gilbert, M Thomas P, Wilson, A. S., Bunce, M., Hansen, Anders Johannes, Willerslev, Eske, Shapiro, B., Higham, T. F. G., Richards, M. P., O'Connell, T. C., Tobin, D. J., Janaway, R. C. & Cooper, A., 2004, In: Current Biology. 14, 12

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Rise and fall of the Beringian steppe bison

      Shapiro, B., Drummond, A. J., Rambaut, A., Wilson, M. C., Matheus, P. E., Sher, A. V., Pybus, O. G., Gilbert, M. T. P., Barnes, I., Binladen, J., Willerslev, E., Hansen, A. J., Baryshnikov, G. F., Burns, J. A., Davydov, S., Driver, J. C., Froese, D. G., Harington, C. R., Keddie, G., Kosintsev, P. & 7 others, Kunz, M. L., Martin, L. D., Stephenson, R. O., Storer, J., Tedford, R., Zimov, S. & Cooper, A., 2004, In: Science. 306, 5701, p. 1561-5

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. 2005
    12. Published

      Beringian paleoecology inferred from permafrost-preserved fungal DNA

      Lydolph, M. C., Jacobsen, J., Arctander, P., Gilbert, M Thomas P, Gilichinsky, D. A., Hansen, Anders Johannes, Willerslev, Eske & Lange, L., 2005, In: Applied and Environmental Microbiology. 71, 2, p. 1012-7 5 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. Published

      Biochemical and physical correlates of DNA contamination in archaeological human bones and teeth excavated at Matera, Italy

      Gilbert, M Thomas P, Rudbeck, L., Willerslev, Eske, Hansen, Anders Johannes, Smith, C., Penkman, K. E. H., Prangenberg, K., Nielsen-Marsh, C. M., Jans, M. E., Arthur, P., Lynnerup, Niels, Turner-Walker, G., Biddle, M., Kjolbye-Biddle, B. & Collins, M. J., 2005, In: Journal of Archaeological Science. 32, 5, p. 785-793

      Research output: Contribution to journal › Journal article › Research › peer-review

    14. Notes and comments: Long-term survival of ancient DNA in Egypt

      Gilbert, M Thomas P, Barnes, I., Collins, Matthew James, Smith, C., Eklund, J., Goudsmit, J., Poinar, H. & Cooper, A., 2005, In: American Journal of Physical Anthropology. 128, 1, p. 110-114

      Research output: Contribution to journal › Comment/debate › Research › peer-review

    15. Published

      mtDNA analysis of human remains from an early Danish Christian cemetery

      Rudbeck, L., Gilbert, M Thomas P, Willerslev, Eske, Hansen, Anders Johannes, Lynnerup, Niels, Christensen, T. & Dissing, J., 2005, In: American Journal of Physical Anthropology. 128, 2, p. 424-9 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    16. 2006
    17. Published

      Assessing the fidelity of ancient DNA sequences amplified from nuclear genes

      Binladen, J., Wiuf, C. H., Gilbert, M Thomas P, Bunce, M., Barnett, R., Larson, G., Greenwood, A. D., Haile, James Seymour, Ho, S. Y. W., Hansen, Anders Johannes & Willerslev, Eske, 2006, In: Genetics. 172, 2, p. 733-41

      Research output: Contribution to journal › Journal article › Research › peer-review

    18. Published

      Authenticity in ancient DNA studies.

      Gilbert, M Thomas P & Willerslev, Eske, 2006, In: Medicina nei Secoli. 18, 3, p. 701-23 22 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    19. Published

      Insights into the processes behind the contamination of degraded human teeth and bone samples with exogenous sources of DNA

      Gilbert, M Thomas P, Hansen, Anders Johannes, Willerslev, Eske, Turner-Walker, G. & Collins, M., 2006, In: International Journal of Osteoarchaeology. 16, 2, p. 156-164

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. Published

      No proof that typhoid caused the Plague of Athens (a reply to Papagrigorakis et al.)

      Shapiro, B., Rambaut, A. & Gilbert, M Thomas P, 2006, In: International Journal of Infectious Diseases. 10, 4, p. 334-335

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Published

      Tracking down human contamination in ancient human teeth.

      Sampietro, M. L., Gilbert, M Thomas P, Lao, O., Caramelli, D., Lari, M., Bertranpetit, J. & Lalueza-Fox, C., 2006, In: Molecular Biology and Evolution. 23, 9, p. 1801-7 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. 2007
    23. Published

      5'-tailed sequencing primers improve sequencing quality of PCR products.

      Binladen, J., Gilbert, M Thomas P, Campos, P. F. & Willerslev, Eske, 2007, In: BioTechniques. 42, 2, p. 174-176

      Research output: Contribution to journal › Journal article › Research › peer-review

    24. Published

      800,000 year old mammoth DNA, modern elephant DNA or PCR artefact?

      Binladen, J., Gilbert, M Thomas P & Willerslev, Eske, 2007, In: Biology Letters. 3, 1, p. 55-6; discussion 60-3

      Research output: Contribution to journal › Journal article › Research › peer-review

    25. Published

      A preliminary analysis of the DNA and diet of the extinct Beothuk: a systematic approach to ancient human DNA.

      Kuch, M., Gröcke, D. R., Knyf, M. C., Gilbert, M Thomas P, Younghusband, B., Young, T., Marshall, I., Willerslev, Eske, Stoneking, M. & Poinar, H., 2007, In: American Journal of Physical Anthropology. 132, 4, p. 594-604 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    26. Published

      Ancient bacteria show evidence of DNA repair.

      Johnson, S. S., Hebsgaard, M. B., Christensen, T. R., Mastepanov, M., Nielsen, Rasmus, Munch, K., Brand, T., Gilbert, M Thomas P, Zuber, M. T., Bunce, M., Rønn, Regin, Gilichinsky, D., Froese, D. & Willerslev, Eske, 2007, In: Proceedings of the National Academy of Science of the United States of America. 104, 36, p. 14401-5 4 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    27. Published

      Ancient biomolecules from deep ice cores reveal a forested southern Greenland.

      Willerslev, E., Cappellini, E., Boomsma, W. K., Nielsen, R., Hebsgaard, M. B., Brand, T. B., Hofreiter, M., Bunce, M., Poinar, H. N., Dahl-Jensen, D., Johnsen, S. J., Steffensen, J. P., Bennike, O., Schwenninger, J-L., Nathan, R., Armitage, S., de Hoog, C-J., Alfimov, V., Christl, M., Beer, J. & 10 others, Muscheler, R., Barker, J., Sharp, M., Penkman, K. E. H., Haile, J., Taberlet, P., Gilbert, M Thomas P, Casoli, A., Campani, E. & Collins, M. J., 2007, In: Science. 317, 5834, p. 111-114 4 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    28. Published

      DNA extraction from dry museum beetles without conferring external morphological damage.

      Gilbert, M Thomas P, Moore, W., Melchior, L. & Worobey, M., 2007, In: PLoS ONE. 2, 3, p. e272

      Research output: Contribution to journal › Journal article › Research › peer-review

    29. Published

      Evaluating Neanderthal genetics and phylogeny.

      Hebsgaard, M. B., Wiuf, C., Gilbert, M Thomas P, Glenner, Henrik & Willerslev, Eske, 2007, In: Journal of Molecular Evolution. 64, 1, p. 50-60 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    30. Published

      More on contamination: the use of asymmetric molecular behavior to identify authentic ancient human DNA.

      Malmström, H., Svensson, E. M., Gilbert, M Thomas P, Willerslev, Eske, Götherström, A. & Holmlund, G., 2007, In: Molecular Biology and Evolution. 24, 4, p. 998-1004 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    31. Published

      Multiplex PCR with minisequencing as an effective high-throughput SNP typing method for formalin-fixed tissue.

      Gilbert, M Thomas P, Sanchez, J. J., Haselkorn, T., Jewell, L. D., Lucas, S. B., Van Marck, E., Børsting, Claus, Morling, Niels & Worobey, M., 2007, In: Electrophoresis. 28, 14, p. 2361-7 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    32. Published

      Recharacterization of ancient DNA miscoding lesions: insights in the era of sequencing-by-synthesis.

      Gilbert, M Thomas P, Binladen, J., Miller, W., Wiuf, C., Willerslev, Eske, Poinar, H., Carlson, J. E., Leebens-Mack, J. H. & Schuster, S. C., 2007, In: Nucleic Acids Research. 35, 1, p. 1-10 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    33. Published

      Rescuing ancient DNA.

      Gilbert, M Thomas P & Willerslev, Eske, 2007, In: Nature Biotechnology. 25, 8, p. 872-4 2 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    34. Published

      Stable isotope and DNA evidence for ritual sequences in Inca child sacrifice.

      Wilson, A. S., Taylor, T., Ceruti, M. C., Chavez, J. A., Reinhard, J., Grimes, V., Meier-Augenstein, W., Cartmell, L., Stern, B., Richards, M. P., Worobey, M., Barnes, I. & Gilbert, M Thomas P, 2007, In: Proceedings of the National Academy of Science of the United States of America. 104, 42, p. 16456-61 5 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    35. Published

      The emergence of HIV/AIDS in the Americas and beyond.

      Gilbert, M Thomas P, Rambaut, A., Wlasiuk, G., Spira, T. J., Pitchenik, A. E. & Worobey, M., 2007, In: Proceedings of the National Academy of Science of the United States of America. 104, 47, p. 18566-70 4 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    36. Published

      The isolation of nucleic acids from fixed, paraffin-embedded tissues-which methods are useful when?

      Gilbert, M Thomas P, Haselkorn, T., Bunce, M., Sanchez, J. J., Lucas, S. B., Jewell, L. D., Van Marck, E. & Worobey, M., 2007, In: PLoS ONE. 2, 6, p. e537

      Research output: Contribution to journal › Journal article › Research › peer-review

    37. Published

      The survival of PCR-amplifiable DNA in cow leather15

      Vuissoz, A., Worobey, M., Odegaard, N., Bunce, M., Machado, C. A., Lynnerup, Niels, Peacock, E. E. & Gilbert, M Thomas P, 2007, In: Journal of Archaeological Science. 34, 5, p. 823-829 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    38. Published

      The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing.

      Binladen, J., Gilbert, M Thomas P, Bollback, J. P., Panitz, F., Bendixen, C., Nielsen, Rasmus & Willerslev, Eske, 2007, In: PLoS ONE. 2, 2, p. e197

      Research output: Contribution to journal › Journal article › Research › peer-review

    39. Published

      Whole-genome shotgun sequencing of mitochondria from ancient hair shafts.

      Gilbert, M. T. P., Tomsho, L. P., Rendulic, S., Packard, M., Drautz, D. I., Sher, A., Tikhonov, A., Dalén, L., Kuznetsova, T., Kosintsev, P., Campos, P. F., Higham, T., Collins, M. J., Wilson, A. S., Shidlovskiy, F., Buigues, B., Ericson, P. G. P., Germonpré, M., Götherström, A., Iacumin, P. & 11 others, Nikolaev, V., Nowak-Kemp, M., Willerslev, Eske, Knight, J. R., Irzyk, G. P., Perbost, C. S., Fredrikson, K. M., Harkins, T. T., Sheridan, S., Miller, W. & Schuster, S. C., 2007, In: Science. 317, 5846, p. 1927-30 3 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    40. Published

      mtDNA from hair and nail clarifies the genetic relationship of the 15th century Qilakitsoq Inuit mummies

      Gilbert, M Thomas P, Djurhuus, D., Melchior, L., Lynnerup, Niels, Worobey, M., Wilson, A. S., Andreasen, C. & Dissing, J., 2007, In: American Journal of Physical Anthropology. 133, 2, p. 847-53 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    41. 2008
    42. Published

      Barking up the wrong tree: modern northern European dogs fail to explain their origin.

      Malmström, H., Vilà, C., Gilbert, M Thomas P, Storå, J., Willerslev, Eske, Holmlund, G. & Götherström, A., 2008, In: BMC Evolutionary Biology. 8, p. 71

      Research output: Contribution to journal › Journal article › Research › peer-review

    43. Published

      Comment on "Protein Sequences from Mastodon and Tyrannosaurus rex Revealed by Mass Spectrometry".

      Buckley, M., Walker, A., Ho, S. Y. W., Yang, Y., Smith, C., Ashton, P., Oates, J. T., Cappellini, E., Koon, H., Penkman, K., Elsworth, B., Ashford, D., Solazzo, C., Andrews, P., Strahler, J., Shapiro, B., Ostrom, P., Gandhi, H., Miller, W., Raney, B. & 8 others, Zylber, M. I., Gilbert, M Thomas P, Prigodich, R. V., Ryan, M., Rijsdijk, K. F., Janoo, A., Collins, M. J. & Gilbert, M Thomas P, 2008, In: Science. 319, 5859, p. 33

      Research output: Contribution to journal › Journal article › Research › peer-review

    44. Published

      DNA from Pre-Clovis Human Coprolites in Oregon, North America.

      Gilbert, M Thomas P, Jenkins, D. L., Götherstrom, A., Naveran, N., Sanchez, J. J., Hofreiter, M., Thomsen, P. F., Binladen, J., Higham, T. F. G., Yohe, R. M., Parr, R., Cummings, L. S. & Willerslev, Eske, 2008, In: Science. 320, 5877, p. 786 - 789

      Research output: Contribution to journal › Journal article › Research › peer-review

    45. Published

      Direct evidence of extensive diversity of HIV-1 in Kinshasa by 1960

      Worobey, M., Gemmel, M., Teuwen, D. E., Haselkorn, T., Kunstman, K., Bunce, M., Muyembe, J., Kabongo, J. M., Kalengayi, R. M., Van Marck, E., Gilbert, M Thomas P & Wolinsky, S. M., 2008, In: Nature. 455, 7213, p. 661-4 3 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    46. Published

      Historical mammal extinction on Christmas Island (Indian Ocean) correlates with introduced infectious disease

      Wyatt, K. B., Campos, P. F., Gilbert, M Thomas P, Kolokotronis, S., Hynes, W. H., DeSalle, R., Daszak, P., MacPhee, R. D. E. & Greenwood, A. D., 2008, In: PLoS ONE. 3, 11, p. e3602

      Research output: Contribution to journal › Journal article › Research › peer-review

    47. Published

      Intraspecific phylogenetic analysis of Siberian woolly mammoths using complete mitochondrial genomes

      Gilbert, M. T. P., Drautz, D. I., Lesk, A. M., Ho, S. Y. W., Qi, J., Ratan, A., Hsu, C-H., Sher, A., Dalén, L., Götherström, A., Tomsho, L. P., Rendulic, S., Packard, M., Campos, P. F., Kuznetsova, T. V., Shidlovskiy, F., Tikhonov, A., Willerslev, E., Iacumin, P., Buigues, B. & 13 others, Ericson, P. G. P., Germonpré, M., Kosintsev, P., Nikolaev, V., Nowak-Kemp, M., Knight, J. R., Irzyk, G. P., Perbost, C. S., Fredrikson, K. M., Harkins, T. T., Sheridan, S., Miller, W. & Schuster, S. C., 2008, In: Proceedings of the National Academy of Science of the United States of America. 105, 24, p. 8327-32 5 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    48. Published

      Paleo-eskimo mtDNA genome reveals matrilineal discontinuity in Greenland

      Gilbert, M. T. P., Kivisild, T., Grønnow, B., Andersen, P. K., Metspalu, E., Reidla, M., Tamm, E., Axelsson, E., Götherström, A., Campos, P. F., Rasmussen, M., Metspalu, M., Higham, T. F. G., Schwenninger, J-L., Nathan, R., De Hoog, C-J., Koch, A., Møller, L. N., Andreasen, C., Meldgaard, M. & 3 others, Villems, R., Bendixen, C. & Willerslev, Eske, 2008, In: Science. 320, 5884, p. 1787-1789 3 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    49. Published

      Rare mtDNA haplogroups and genetic differences in rich and poor Danish Iron-Age villages.

      Melchior, L., Gilbert, M Thomas P, Kivisild, T., Lynnerup, Niels & Dissing, J., 2008, In: American Journal of Physical Anthropology. 135, 2, p. 206-15 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    50. Published

      Reply to Pape et al.: the phylogeography of HIV-1 group M subtype B.

      Worobey, M., Pitchenik, A. E., Gilbert, M Thomas P, Wlasiuk, G. & Rambaut, A., 2008, In: Proceedings of the National Academy of Science of the United States of America. 105, 12, p. E16

      Research output: Contribution to journal › Journal article › Research › peer-review

    51. Published

      Response to Comment on "Whole-Genome Shotgun Sequencing of Mitochondria from Ancient Hair Shafts"

      Gilbert, M Thomas P, Miller, W. & Schuster, S. C., 2008, In: Science. 322, 5903, p. 857

      Research output: Contribution to journal › Journal article › Research › peer-review

    52. Published

      Statistical analysis of post mortem DNA damage-derived miscoding lesions in Neandertal mitochondrial DNA

      Vives, S., Gilbert, M Thomas P, Arenas, C., Gigli, E., Lao, O. & Lalueza-Fox, C., 2008, In: BMC Research Notes. 1, p. 40

      Research output: Contribution to journal › Journal article › Research › peer-review

    53. Published

      The effect of ancient DNA damage on inferences of demographic histories

      Axelsson, E., Willerslev, Eske, Gilbert, M Thomas P & Nielsen, Rasmus, 2008, In: Molecular Biology and Evolution. 25, 10, p. 2181-7 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    54. 2009
    55. Published

      An improved PCR method for endogenous DNA retrieval in contaminated Neandertal samples based on the usage of blocking primers

      Gigli, E., Rasmussen, M., Civit, S., Rosas, A., de la Rasilla, M., Fortea, J., Gilbert, M Thomas P, Willerslev, Eske & Lalueza-Fox, C., 2009, In: Journal of Archaeological Science. 36, p. 2676-2679

      Research output: Contribution to journal › Journal article › Research › peer-review

    56. Published

      Analysis of complete mitochondrial genomes from extinct and extant rhinoceroses reveals lack of phylogenetic resolution

      Willerslev, Eske, Gilbert, M Thomas P, Binladen, J., Ho, S. Y. W., Campos, P. F., Ratan, A., Tomsho, L. P., da Fonseca, R. R., Sher, A., Kuznetsova, T. V., Nowak-Kemp, M., Roth, T. L., Miller, W. & Schuster, S. C., 2009, In: BMC Evolutionary Biology. 9, p. 95

      Research output: Contribution to journal › Journal article › Research › peer-review

    57. Published

      Ancient DNA reveals lack of continuity between neolithic hunter-gatherers and contemporary Scandinavians

      Malmström, H., Gilbert, M Thomas P, Thomas, M. G., Brandström, M., Storå, J., Molnar, P., Andersen, P. K., Bendixen, C., Holmlund, G., Götherström, A. & Willerslev, Eske, 2009, In: Current Biology. 19, 20, p. 1758-62 4 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    58. Published

      Ancient DNA reveals late survival of mammoth and horse in interior Alaska

      Haile, James Seymour, Froese, D. G., Macphee, R. D. E., Roberts, R. G., Arnold, L. J., Reyes, A. V., Rasmussen, M., Nielsen, Rasmus, Brook, B. W., Robinson, S., Demuro, M., Gilbert, M Thomas P, Munch, K., Austin, J. J., Cooper, A., Barnes, I., Möller, P. & Willerslev, Eske, 2009, In: Proceedings of the National Academy of Science of the United States of America. 106, 52, p. 22352-7 5 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

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