Tom Gilbert
Professor
- 2013
- Published
Genomic diversity and evolution of the head crest in the rock pigeon
Shapiro, M. D., Kronenberg, Z., Li, C., Domyan, E. T., Pan, H., Campbell, M., Tan, H., Huff, C. D., Hu, H., Vickrey, A. I., Nielsen, S. C. A., Stringham, S. A., Hu, H., Willerslev, Eske, Gilbert, M Thomas P, Yandell, M., Zhang, G. & Wang, J., 1 Mar 2013, In: Science. 339, 6123, p. 1063-1067 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
When bugs reveal biodiversity
Bohmann, Kristine, Schnell, I. B. & Gilbert, M Thomas P, 13 Feb 2013, In: Molecular Ecology. 22, 4, p. 909-911 3 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
One hundred twenty years of koala retrovirus evolution determined from museum skins
Avila Arcos, M. D. C., Ho, S. Y. W., Ishida, Y., Nikolaidis, N., Tsangaras, K., Hönig, K., Medina, R., Rasmussen, M., Fordyce, S. L., Calvignac-Spencer, S., Willerslev, Eske, Gilbert, M Thomas P, Helgen, K. M., Roca, A. L. & Greenwood, A. D., Feb 2013, In: Molecular Biology and Evolution. 30, 2, p. 299-304 6 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Deep sequencing of RNA from ancient maize kernels
Fordyce, S. L., Avila Arcos, M. D. C., Rasmussen, M., Cappellini, Enrico, Romero-Navarro, J. A., Wales, N., Alquezar Planas, D. E., Penfield, S., Brown, T. A., Vielle-Calzada, J., Montiel, R., Jørgensen, Tina, Odegaard, N., Jacobs, M., Arriaza, B., Higham, T. F. G., Ramsey, C. B., Willerslev, Eske & Gilbert, M Thomas P, 11 Jan 2013, In: PLoS ONE. 8, 1, 9 p., e50961.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genetic diversity among pandemic 2009 influenza viruses isolated from a transmission chain
Fordyce, S. L., Bragstad, K., Pedersen, S. S., Jensen, T. G., Gahrn-Hansen, B., Daniels, R., Hay, A., Kampmann, Marie-Louise, Bruhn, C. A. W., Moreno Mayar, J. Víctor, Avila Arcos, M. D. C., Gilbert, M Thomas P & Nielsen, L. P., 2013, In: Virology Journal. 10, 9 p., 116.Research output: Contribution to journal › Journal article › Research › peer-review
- 2012
- Published
High-throughput sequencing of ancient plant and mammal DNA preserved in herbivore middens
Murray, D. C., Pearson, S. G., Fullagar, R., Chase, B. M., Houston, J., Atchison, J., White, N. E., Bellgard, M. I., Clarke, E., Macphail, M., Gilbert, M Thomas P, Haile, James Seymour & Bunce, M., 14 Dec 2012, In: Quaternary Science Reviews. 58, p. 135-145 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Minimally destructive DNA extraction from archaeological artefacts made from whale baleen
Sinding, Mikkel Holger Strander, Gilbert, M Thomas P, Grønnow, B., Gulløv, H. C., Toft, P. A. & Foote, A. D., 1 Dec 2012, In: Journal of Archaeological Science. 39, 12, p. 3750-3753 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Marine turtle mitogenome phylogenetics and evolution
Duchene, S., Frey, A., Alfaro-Núñez, L. A., Dutton, P. H., Gilbert, M Thomas P & Morin, P. A., 1 Oct 2012, In: Molecular Phylogenetics and Evolution. 65, 1, p. 241-250 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Choosing the best plant for the job: a cost-effective assay to prescreen ancient plant remains destined for shotgun sequencing
Wales, N., Romero-Navarro, J. A., Cappellini, Enrico & Gilbert, M Thomas P, 20 Sep 2012, In: PLoS ONE. 7, 9, 8 p., e45644.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Investigating the potential use of environmental DNA (eDNA) for genetic monitoring of marine mammals
Foote, A. D., Thomsen, P. F., Sveegaard, S., Wahlberg, M., Kielgast, J., Kyhn, L. A., Salling, A. B., Galatius, A., Orlando, L. A. A. & Gilbert, M Thomas P, 29 Aug 2012, In: PLoS ONE. 7, 8, 6 p., e41781.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA from soil mirrors plant taxonomic and growth form diversity
Yoccoz, N. G., Bråthen, K. A., Gielly, L., Haile, J. S., Edwards, M. E., Goslar, T., von Stedingk, H., Brysting, A. K., Coissac, E., Pompanon, F., Sønstebo, J. H., Miquel, C., Valentini, A., de Bello, F., Chave, J., Thuiller, W., Wincker, P., Cruaud, C., Gavory, F., Rasmussen, M. & 5 others, , 1 Aug 2012, In: Molecular Ecology. 21, 15, p. 3647-3655 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Clovis age Western stemmed projectile points and human coprolites at the Paisley Caves
Jenkins, D. L., Davis, L. G., Stafford jr., T., Campos, P., Hockett, B., Jones, G. T., Cummings, L. S., Yost, C., Connolly, T. J., Yohe II, R. M., Gibbons, S. C., Raghavan, M., Rasmussen, M., Paijmans, J. L. A., Hofreiter, M., Kemp, B. M., Barta, J. L., Monroe, C., Gilbert, M Thomas P & Willerslev, Eske, 13 Jul 2012, In: Science. 337, 6091, p. 223-228 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Improving the performance of true single molecule sequencing for ancient DNA
Ginolhac, A., Mouatt, J. T. V., Stenderup, Jesper Tandberg, Rasmussen, M., Stiller, M., Shapiro, B., Zazula, G., Froese, D., Steinmann, K. E., Thompson, J. F., Al-Rasheid, K. A. S., Gilbert, M Thomas P, Willerslev, Eske & Orlando, L. A. A., 10 May 2012, In: BMC Genomics. 13, 14 p., 177.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Statistical guidelines for detecting past population shifts using ancient DNA
Mourier, T., Ho, S. Y. W., Gilbert, M Thomas P, Willerslev, Eske & Orlando, L. A. A., 16 Mar 2012, In: Molecular Biology and Evolution. 29, 9, p. 2241-2251 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Glacial survival of boreal trees in northern Scandinavia
Parducci, L., Jørgensen, T., Tollefsrud, M. M., Elverland, E., Alm, T., Fontana, S. L., Bennett, K. D., Haile, J. S., Matetovici, I., Suyama, Y., Edwards, M. E., Andersen, K., Rasmussen, M., Boessenkool, S., Coissac, E., Brochmann, C., Taberlet, P., Houmark-Nielsen, M., Larsen, N. K., Orlando, L. A. A. & 4 others, , 2 Mar 2012, In: Science. 335, 6072, p. 1083-1086 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA in ancient bone - where is it located and how should we extract it?
Campos, P., Craig, O. E., Turner-Walker, G., Peacock, E., Willerslev, Eske & Gilbert, M Thomas P, 20 Jan 2012, In: Annals of Anatomy. 194, 1, p. 7-16 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Finding the founder of Stockholm - A kinship study based on Y-chromosomal, autosomal and mitochondrial DNA
Malmström, H., Vretemark, M., Tillmar, A., Durling, M. B., Skoglund, P., Gilbert, M Thomas P, Willerslev, Eske, Holmlund, G. & Götherström, A., Jan 2012, In: Annals of Anatomy. 194, 1, p. 138-145 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Plasmodium falciparum erythrocyte membrane protein 1 domain cassettes 8 and 13 are associated with severe malaria in children
Lavstsen, Thomas, Turner, Louise, Saguti, F., Magistrado, P. A., Rask, T. S., Jespersen, Jakob Schmidt, Wang, Christian William, Berger, S. S., Baraka, V., Marquard, A. M., Seguin-Orlando, A., Willerslev, Eske, Gilbert, M Thomas P, Lusingu, J. P. A. & Theander, Thor Grundtvig, 2012, In: Proceedings of the National Academy of Sciences of the United States of America. 109, 26, p. E1791-E1800 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A comparative study of ancient sedimentary DNA, pollen and macrofossils from permafrost sediments of northern Siberia reveals long-term vegetational stability
Jørgensen, Tina, Haile, James Seymour, Möller, P., Andreev, A., Boessenkool, S., Rasmussen, M., Kienast, F., Coissac, E., Taberlet, P., Brochmann, C., Bigelow, N. H., Andersen, K., Orlando, L. A. A., Gilbert, M Thomas P & Willerslev, Eske, 2012, In: Molecular Ecology. 21, 8, p. 1989-2003 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA extraction from formalin-fixed material
Campos, P. & Gilbert, M Thomas P, 2012, Ancient DNA: methods and protocols. Shapiro, B. & Hofreiter, M. (eds.). Humana Press, p. 81-85 5 p. (Methods in Molecular Biology, Vol. 840).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
DNA extraction from keratin and chitin
Campos, P. & Gilbert, M Thomas P, 2012, Ancient DNA: methods and protocols. Shapiro, B. & Hofreiter, M. (eds.). Humana Press, p. 43-49 7 p. (Methods in Molecular Biology, Vol. 840).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
DNA from keratinous tissue. Part I: hair and nail
Bengtsson, C. F., Olsen, M. E., Brandt, Luise Ørsted, Bertelsen, Mads Frost, Willerslev, Eske, Tobin, D. J., Wilson, A. S. & Gilbert, M Thomas P, 2012, In: Annals of Anatomy. 194, 1, p. 17-25 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA from keratinous tissue. Part II: feather
Olsen, M. E., Bengtsson, C. F., Bertelsen, Mads Frost, Willerslev, Eske & Gilbert, M Thomas P, 2012, In: Annals of Anatomy. 194, 1, p. 31-35 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fellow travellers: a concordance of colonization patterns between mice and men in the North Atlantic region
Jones, E. P., Skirnisson, K., McGovern, T. H., Gilbert, M Thomas P, Willerslev, Eske & Searle, J. B., 2012, In: BMC Evolutionary Biology. 12, 1, 8 p., 35.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic affinities of two 7,000-year-old Iberian hunter-gatherers
Sánchez-Quinto, F., Schroeder, Hannes, Ramirez, O., Avila Arcos, M. D. C., Pybus, M., Olalde, I., Velazquez, A. M. V., Marcos, M., Encinas, J., Bertranpetit, J., Orlando, L. A. A., Gilbert, M Thomas P & Lalueza-Fox, C., 2012, In: Current Biology. 22, 16, p. 1494-1499 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Islands in the ice: detecting past vegetation on Greenlandic nunataks using historical records and sedimentary ancient DNA Meta-barcoding
Jørgensen, Tina, Kjær, Kurt H., Haile, James Seymour, Rasmussen, M., Boessenkool, S., Andersen, K., Coissac, E., Taberlet, P., Brochmann, C., Orlando, L. A. A., Gilbert, M Thomas P & Willerslev, Eske, 2012, In: Molecular Ecology. 21, 8, p. 1980-1988 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Meta-barcoding of 'dirt' DNA from soil reflects vertebrate biodiversity
Andersen, K., Bird, K. L., Rasmussen, M., Haile, James Seymour, Breuning-Madsen, H., Kjær, Kurt H., Orlando, L. A. A., Gilbert, M Thomas P & Willerslev, Eske, 2012, In: Molecular Ecology. 21, 8, p. 1966-1979 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mitogenome sequencing reveals shallow evolutionary histories and recent divergence time between morphologically and ecologically distinct European whitefish (Coregonus spp.)
Jacobsen, L. M. W., Hansen, M. M., Orlando, L. A. A., Bekkevold, D., Bernatchez, L., Willerslev, Eske & Gilbert, M Thomas P, 2012, In: Molecular Ecology. 21, 11, p. 2727-2742 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Monitoring endangered freshwater biodiversity using environmental DNA
Thomsen, P. F., Kielgast, J., Iversen, Lars Lønsmann, Wiuf, C. H., Rasmussen, M., Gilbert, M Thomas P, Orlando, L. A. A. & Willerslev, Eske, 2012, In: Molecular Ecology. 21, 11, p. 2565-2573 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Origins and genetic legacy of Neolithic farmers and hunter-gatherers in Europe
Skoglund, P., Malmström, H., Raghavan, M., Storå, J., Hall, P., Willerslev, Eske, Gilbert, M Thomas P, Götherström, A. & Jakobsson, M., 2012, In: Science. 336, 6080, p. 466-469 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Partial genetic turnover in Neandertals: continuity in the East and population replacement in the West
Dalén, L., Orlando, L. A. A., Shapiro, B., Brandström-Durling, M., Quam, R., Gilbert, M Thomas P, Díez Fernández-Lomana, J. C., Willerslev, Eske, Arsuaga, J. L. & Götherström, A., 2012, In: Molecular Biology and Evolution. 29, 8, p. 1893-1897 5 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Probable transmission of coxsackie B3 virus from human to chimpanzee, Denmark
Nielsen, S. C. A., Mourier, T., Baandrup, U., Søland, Tine Mangart, Bertelsen, Mads Frost, Gilbert, M Thomas P & Nielsen, L. P., 2012, In: Emerging Infectious Diseases . 18, 7, p. 1163-1165 3 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Proteomic analysis of a pleistocene mammoth femur reveals more than one hundred ancient bone proteins
Cappellini, Enrico, Jensen, Lars Juhl, Szklarczyk, D. M., Ginolhac, A., Rodrigues da Fonseca, Rute Andreia, Stafford jr., T., Holen, S. R., Collins, M. J., Orlando, L. A. A., Willerslev, Eske, Gilbert, M Thomas P & Olsen, Jesper Velgaard, 2012, In: Journal of Proteome Research. 11, 2, p. 917-926 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Screening mammal biodiversity using DNA from leeches
Schnell, I. B., Thomsen, P. F., Wilkinson, N., Rasmussen, M., Jensen, L. R. D., Willerslev, Eske, Bertelsen, Mads Frost & Gilbert, M Thomas P, 2012, In: Current Biology. 22, 8, p. R262-R263 2 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
The half-life of DNA in bone: measuring decay kinetics in 158 dated fossils
Allentoft, Morten Erik, Collins, M., Harker, D., Haile, J., Oskam, C. L., Hale, M. L., Campos, P., Samaniego Castruita, J. A., Gilbert, M Thomas P, Willerslev, Eske, Zhang, G., Scofield, R. P., Holdaway, R. N. & Bunce, M., 2012, In: Proceedings of the Royal Society B: Biological Sciences. 279, 1748, p. 4724-4733 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2011
- Published
A simple method for the parallel deep sequencing of full influenza A genomes
Kampmann, Marie-Louise, Fordyce, S. L., Avila Arcos, M. D. C., Rasmussen, M., Willerslev, Eske, Nielsen, L. P. & Gilbert, M Thomas P, Dec 2011, In: Journal of Virological Methods. 178, 1-2, p. 243-248 6 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
High-throughput sequencing of core STR loci for forensic genetic investigations using the Roche Genome Sequencer FLX platform
Fordyce, S. L., Avila Arcos, M. D. C., Rockenbauer, Eszter, Børsting, Claus, Frank-Hansen, R., Petersen, J. F. T., Willerslev, Eske, Hansen, Anders Johannes, Morling, Niels & Gilbert, M Thomas P, 1 Aug 2011, In: BioTechniques. 51, 2, p. 127-133 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
mapDamage: testing for damage patterns in ancient DNA sequences
Ginolhac, A., Rasmussen, M., Gilbert, M Thomas P, Willerslev, Eske & Orlando, L. A. A., 1 Aug 2011, In: Bioinformatics. 27, 15, p. 2153-2155 3 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The evolutionary history of cockatoos (Aves: Psittaciformes: Cacatuidae)
White, N. E., Phillips, M. J., Gilbert, M Thomas P, Alfaro Nuñez, L. A., Willerslev, Eske, Mawson, P. R., Spencer, P. B. S. & Bunce, M., Jun 2011, In: Molecular Phylogenetics and Evolution. 59, 3, p. 615-622 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Reply to Vigilant and Langergraber: patrilocality in Neandertals is still the most plausible explanation
Lalueza-Fox, C., Rosas, A., de la Rasilla, M., Gilbert, M Thomas P & Willerslev, Eske, 3 May 2011, In: Proceedings of the National Academy of Sciences of the United States of America. 108, 18, p. E88 1 p.Research output: Contribution to journal › Comment/debate › Research
- Published
HIV-2 down, HIV-1 to go? Understanding the possibilities of treatment as prevention
Bruhn, C. A. W. & Gilbert, M Thomas P, Apr 2011, In: The Lancet Infectious Diseases. 11, 4, p. 260-261 2 p.Research output: Contribution to journal › Comment/debate › Research
- Published
Genetic evidence for patrilocal mating behavior among Neandertal groups
Lalueza-Fox, C., Rosas, A., Estalrrich, A., Gigli, E., Campos, P., García-Tabernero, A., García-Vargas, S., Sánchez-Quinto, F., Ramírez, O., Civit, S., Bastir, M., Huguet, R., Santamaría, D., Gilbert, M Thomas P, Willerslev, Eske & la Rasilla, M. D., 4 Jan 2011, In: National Academy of Sciences. Proceedings. 108, 1, p. 250-253 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mitogenomic phylogenetic analyses of the Delphinidae with an emphasis on the Globicephalinae
Mouatt, J. T. V., Ho, S. Y. W., Foote, A. D., Morin, P. A., Kreb, D., Krützen, M., Parra, G. J., Robertson, K. M., de Stephanis, R., Verborgh, P., Willerslev, Eske, Orlando, L. A. A. & Gilbert, M Thomas P, 1 Jan 2011, In: BMC Evolutionary Biology. 11, 10 p., 65.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An Aboriginal Australian genome reveals separate human dispersals into Asia
Rasmussen, M., Guo, X., Wang, Y., Lohmueller, K. E., Rasmussen, S., Albrechtsen, A., Skotte, L., Lindgreen, S., Metspalu, M., Jombart, T., Kivisild, T., Zhai, W., Eriksson, A., Manica, A., Orlando, L., De La Vega, F. M., Tridico, S., Metspalu, E., Nielsen, K., Avila Arcos, M. D. C. & 38 others, , 2011, In: Science. 334, 6052, p. 94-98 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Application and comparison of large-scale solution-based DNA capture-enrichment methods on ancient DNA
Avila Arcos, M. D. C., Cappellini, Enrico, Romero-Navarro, J. A., Wales, N., Moreno Mayar, J. Víctor, Rasmussen, M., Fordyce, S. L., Montiel, R., Vielle-Calzada, J., Willerslev, Eske & Gilbert, M Thomas P, 2011, In: Scientific Reports. 1, 5 p., 74.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bone marrow and bone as a source for postmortem RNA
van Doorn, N. L., Wilson, A. S., Willerslev, Eske & Gilbert, M Thomas P, 2011, In: Journal of Forensic Sciences. 56, 3, p. 720-725 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterising the potential of sheep wool for ancient DNA analyses
Brandt, Luise Ørsted, Tranekjer, L. D., Mannering, U., Ringgaard, M., Frei, Karin Margarita, Willerslev, Eske, Gleba, M. & Gilbert, M Thomas P, 2011, In: Archaeological and Anthropological Sciences. 3, 2, p. 209-221 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dirt, dates and DNA: OSL and radiocarbon chronologies of perennially-frozen sediments in Siberia, and their implications for sedimentary ancient DNA studies
Arnold, L. J., Roberts, R. G., MacPhee, R. D. E., Haile, James Seymour, Brock, F., Möller, P., Froese, D. G., Tikhonov, A. N., Chivas, A. R., Gilbert, M Thomas P & Willerslev, Eske, 2011, In: Boreas. 40, 3, p. 417-445 29 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genetic differentiation among North Atlantic killer whale populations
Foote, A. D., Mouatt, J. T. V., De Stephanis, R., Verborgh, P., Nielsen, S. C. A., Deaville, R., Kleivane, L., Martin, V., Miller, P. J. O., Oien, N., Pérez-Gil, M., Rasmussen, M., Reid, R. J., Robertson, K. M., Rogan, E., Similä, T., Tejedor, M. L., Vester, H., Vikingsson, G. A., Willerslev, E. & 2 others, , 2011, In: Molecular Ecology. 20, 3, p. 629-641 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome sequence of Campylobacter jejuni strain 327, a strain isolated from a turkey slaughterhouse
Takamiya, M., Özen, A. I., Rasmussen, M., Alter, T., Gilbert, M Thomas P, Ussery, D. & Knoechel, Susanne, 2011, In: Standards in Genomic Sciences. 4, 2, p. 113-122 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 12980
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Reconstructing genome evolution in historic samples of the Irish potato famine pathogen
Research output: Contribution to journal › Journal article › Research › peer-review
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5638
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Deep sequencing of RNA from ancient maize kernels
Research output: Contribution to journal › Journal article › Research › peer-review
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5249
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True single-molecule DNA sequencing of a pleistocene horse bone
Research output: Contribution to journal › Journal article › Research › peer-review
Published