Tom Gilbert

Tom Gilbert

Professor

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    ORCID: 0000-0002-5805-7195

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    1. Published

      Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing

      Mak, Sarah Siu Tze, Gopalakrishnan, Shyam, Carøe, C., Geng, C., Liu, Shanlin, Sinding, Mikkel Holger Strander, Kuderna, L. F. K., Zhang, W., Fu, S., Vieira, Filipe Garrett, Germonpré, M., Bocherens, H., Fedorov, S., Petersen, Bent, Sicheritz-Pontén, T., Marques-Bonet, T., KU, thw266, Jiang, H. & Gilbert, M Thomas P, Aug 2017, In: GigaScience. 6, 8, p. 1–13 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    2. Published

      More on contamination: the use of asymmetric molecular behavior to identify authentic ancient human DNA.

      Malmström, H., Svensson, E. M., Gilbert, M Thomas P, Willerslev, Eske, Götherström, A. & Holmlund, G., 2007, In: Molecular Biology and Evolution. 24, 4, p. 998-1004 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      Ancient mitochondrial DNA from the northern fringe of the Neolithic farming expansion in Europe sheds light on the dispersion process

      Malmström, H., Linderholm, A., Skoglund, P., Storå, J., Sjödin, P., Gilbert, M Thomas P, Holmlund, G., Willerslev, Eske, Jakobsson, M., Lidén, K. & Götherström, A., 2015, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 370, 10 p., 20130373.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. Published

      Barking up the wrong tree: modern northern European dogs fail to explain their origin.

      Malmström, H., Vilà, C., Gilbert, M Thomas P, Storå, J., Willerslev, Eske, Holmlund, G. & Götherström, A., 2008, In: BMC Evolutionary Biology. 8, p. 71

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      Ancient DNA reveals lack of continuity between neolithic hunter-gatherers and contemporary Scandinavians

      Malmström, H., Gilbert, M Thomas P, Thomas, M. G., Brandström, M., Storå, J., Molnar, P., Andersen, P. K., Bendixen, C., Holmlund, G., Götherström, A. & Willerslev, Eske, 2009, In: Current Biology. 19, 20, p. 1758-62 4 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      Finding the founder of Stockholm - A kinship study based on Y-chromosomal, autosomal and mitochondrial DNA

      Malmström, H., Vretemark, M., Tillmar, A., Durling, M. B., Skoglund, P., Gilbert, M Thomas P, Willerslev, Eske, Holmlund, G. & Götherström, A., Jan 2012, In: Annals of Anatomy. 194, 1, p. 138-145 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      Mitochondrial genomes of Danish vertebrate species generated for the national DNA reference database, DNAmark

      Margaryan, Ashot, Noer, Christina, Richter, S. R., Restrup, M. E., Bülow‐hansen, J. L., Leerhøi, Frederik, Arfaoui, Emilia Marie Rolander, Gopalakrishnan, Shyam, Carøe, C., Gilbert, M Thomas P & Bohmann, Kristine, 2021, In: Environmental DNA. 3, 2, p. 472-480

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      Recent mitochondrial lineage extinction in the critically endangered Javan rhinoceros

      Margaryan, Ashot, Sinding, Mikkel Holger Strander, Liu, Shanlin, Vieira, Filipe Garrett, Chan, Y. L., Nathan, S. K. S. S., Moodley, Y., Bruford, M. W. & Gilbert, M Thomas P, 2020, In: Zoological Journal of the Linnean Society. 190, 1, p. 372-383 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Population genomics of the Viking world: [incl. correction]

      Margaryan, A., Lawson, D. J., Sikora, M., Racimo, F., Rasmussen, S., Moltke, I., Cassidy, L. M., Jørsboe, E., Ingason, A., Pedersen, M. W., Korneliussen, T., Wilhelmson, H., Buś, M. M., de Barros Damgaard, P., Martiniano, R., Renaud, G., Bhérer, C., Moreno-Mayar, J. V., Fotakis, A. K., Allen, M. & 30 others, Allmäe, R., Molak, M., Cappellini, Enrico, Scorrano, Gabriele, McColl, Hugh, Buzhilova, A., Fox, A., Albrechtsen, Anders, Schütz, B., Skar, B., Arcini, C., Lundstrøm, I., Cheng, J., Stenderup, Jesper Tandberg, Iversen, K. H., Arge, S. V., Ellingvåg, S., Orlando, L., Pentz, P., Jessen, M. D., Pedersen, A., Jørkov, M L S, Lynnerup, Niels, Gilbert, M Thomas P, Allentoft, Morten Erik, Sindbæk, S. M., Kristiansen, K., Nielsen, Rasmus, Werge, Thomas & Willerslev, Eske, 2020, In: Nature. 585, 7825, p. 390-396 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Persistence of the mitochondrial lineage responsible for the Irish potato famine in extant New World Phytophthora infestans

      Martin, M. D., Ho, S. Y. W., Wales, N., Ristaino, J. B. & Gilbert, M Thomas P, 2014, In: Molecular Biology and Evolution. 31, 6, p. 1414-1420 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. Published

      Reconstructing genome evolution in historic samples of the Irish potato famine pathogen

      Martin, M. D., Cappellini, Enrico, Samaniego Castruita, J. A., Zepeda Mendoza, M. L., Campos, P., Seguin-Orlando, A., Wales, N., Orlando, L. A. A., Ho, S. Y. W., Dietrich, F. S., Mieczkowski, P. A., Heitman, J., Willerslev, Eske, Krogh, Anders, Ristaino, J. B. & Gilbert, M Thomas P, 18 Jul 2013, In: Nature Communications. 4, 7 p., 2172.

      Research output: Contribution to journal › Journal article › Research › peer-review

    12. Published

      Genomic characterization of a South American Phytophthora hybrid mandates reassessment of the geographic origins of Phytophthora infestans

      Martin, M. D., Vieira, Filipe Garrett, Ho, S. Y. W., Wales, N., Schubert, Mikkel, Seguin-Orlando, A., Ristaino, J. B. & Gilbert, M Thomas P, 2016, In: Molecular Biology and Evolution. 33, 2, p. 478-491 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. Published

      Herbarium specimens reveal a historical shift in phylogeographic structure of common ragweed during native range disturbance

      Martin, M. D., Zimmer, E. A., Olsen, Morten Tange, Foote, A. D., Gilbert, M Thomas P & Brush, G. S., 2014, In: Molecular Ecology. 23, 7, p. 1701-1716 16 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    14. Published

      The population genomic basis of geographic differentiation in North American common ragweed (Ambrosia artemisiifolia L.)

      Martin, M. D., Olsen, Morten Tange, Samaniego Castruita, J. A., Zimmer, E. A. & Gilbert, M Thomas P, Jun 2016, In: Ecology and Evolution. 6, 11, p. 3760-3771 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    15. Published

      Rare mtDNA haplogroups and genetic differences in rich and poor Danish Iron-Age villages.

      Melchior, L., Gilbert, M Thomas P, Kivisild, T., Lynnerup, Niels & Dissing, J., 2008, In: American Journal of Physical Anthropology. 135, 2, p. 206-15 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    16. Published

      Evidence for a single loss of mineralized teeth in the common avian ancestor

      Meredith, R. W., KU, thw266, Gilbert, M Thomas P, Jarvis, E. D. & Springer, M. S., 2014, In: Science. 346, 6215, 6 p., 1254390.

      Research output: Contribution to journal › Journal article › Research › peer-review

    17. Published

      Application of full mitochondrial genome sequencing using 454 GS FLX pyrosequencing

      Mikkelsen, M., Rockenbauer, Eszter, Wächter, A., Fendt, L., Zimmermann, B., Parson, W., Nielsen, S. A., Gilbert, M Thomas P, Willerslev, Eske & Morling, Niels, 2009, Progress in Forensic Genetics 13: Proceedings of the 23rd International ISFG Congress. Morling, N. (ed.). Elsevier, Vol. 2. p. 518 - 519 2 p. (Forensic Science International: Genetics Supplement Series; No. 1, Vol. 2).

      Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

    18. Published

      The mitochondrial genome sequence of the Tasmanian tiger (Thylacinus cynocephalus)

      Miller, W., Drautz, D. I., Janecka, J. E., Lesk, A. M., Ratan, A., Tomsho, L. P., Packard, M., Zhang, Y., McClellan, L. R., Qi, J., Zhao, F., Gilbert, M Thomas P, Dalén, L., Arsuaga, J. L., Ericson, P. G. P., Huson, D. H., Helgen, K. M., Murphy, W. J., Götherström, A. & Schuster, S. C., 2009, In: Genome Research. 19, 2, p. 213-20 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    19. Published

      An expanded mammal mitogenome dataset from Southeast Asia

      Mohd Salleh, F. B., Ramos Madrigal, Jazmin, Peñaloza, F., Liu, Shanlin, Sinding, Mikkel Holger Strander, Patel, R. P., Martins, R., Lenz, D., Fickel, J., Roos, C., Shamsir, M. S., Azman, M. S., Lim, B. K., Rossiter, S. J., Wilting, A. & Gilbert, M Thomas P, Aug 2017, In: GigaScience. 6, 8, p. 1–8 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. Published

      Complete mitochondrial genome phylogeographic analysis of killer whales (Orcinus orca) indicates multiple species

      Morin, P. A., Archer, F. I., Foote, A. D., Mouatt, J. T. V., Allen, E. E., Wade, P., Durban, J., Parsons, K., Pitman, R., Li, L., Bouffard, P., Nielsen, S. C. A., Rasmussen, M., Willerslev, Eske, Gilbert, M Thomas P & Harkins, T., 1 Jul 2010, In: Genome Research. 20, 7, p. 908-916 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Published

      Geographic and temporal dynamics of a global radiation and diversification in the killer whale

      Morin, P. A., Parsons, K. M., Archer, F. I., Avila Arcos, M. D. C., Barrett-Lennard, L. G., Dalla Rosa, L., Duchêne, S., Durban, J. W., Ellis, G. M., Ferguson, S. H., Ford, J. K., Ford, M. J., Garilao, C., Gilbert, M. T. P., Kaschner, K., Matkin, C. O., Petersen, S. D., Robertson, K. M., Visser, I. N., Wade, P. R. & 2 others, Ho, S. Y. W. & Foote, A. D., 2015, In: Molecular Ecology. 24, 15, p. 3964-3979 16 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Published

      Mitogenomic phylogenetic analyses of the Delphinidae with an emphasis on the Globicephalinae

      Mouatt, J. T. V., Ho, S. Y. W., Foote, A. D., Morin, P. A., Kreb, D., Krützen, M., Parra, G. J., Robertson, K. M., de Stephanis, R., Verborgh, P., Willerslev, Eske, Orlando, L. A. A. & Gilbert, M Thomas P, 1 Jan 2011, In: BMC Evolutionary Biology. 11, 10 p., 65.

      Research output: Contribution to journal › Journal article › Research › peer-review

    23. Published

      Recent diversification of a marine genus (Tursiops spp.) Tracks habitat preference and environmental change

      Moura, A. E., Nielsen, S. C. A., Mouatt, J. T. V., Moreno Mayar, J. Víctor, Gilbert, M Thomas P, Gray, H. W. I., Natoli, A., Möller, L. & Hoelzel, A. R., Nov 2013, In: Systematic Biology. 62, 6, p. 865-77 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    24. Published

      Statistical guidelines for detecting past population shifts using ancient DNA

      Mourier, T., Ho, S. Y. W., Gilbert, M Thomas P, Willerslev, Eske & Orlando, L. A. A., 16 Mar 2012, In: Molecular Biology and Evolution. 29, 9, p. 2241-2251 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    25. Published

      High-throughput sequencing of ancient plant and mammal DNA preserved in herbivore middens

      Murray, D. C., Pearson, S. G., Fullagar, R., Chase, B. M., Houston, J., Atchison, J., White, N. E., Bellgard, M. I., Clarke, E., Macphail, M., Gilbert, M Thomas P, Haile, James Seymour & Bunce, M., 14 Dec 2012, In: Quaternary Science Reviews. 58, p. 135-145 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

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    ID: 12980