Tom Gilbert

Tom Gilbert

Professor

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    ORCID: 0000-0002-5805-7195

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    1. Published

      Complete mitochondrial genomes of living and extinct pigeons revise the timing of the columbiform radiation

      Soares, A. E. R., Novak, B. J., Haile, James Seymour, Heupink, T. H., Fjeldså, Jon, Gilbert, M Thomas P, Poinar, H., Church, G. M. & Shapiro, B., 2016, In: BMC Evolutionary Biology. 16, 9 p., 230.

      Research output: Contribution to journal › Journal article › Research › peer-review

    2. Published

      Complex evolutionary trajectories of sex chromosomes across bird taxa

      Zhou, Q., Zhang, J., Bachtrog, D., An, N., Huang, Q., Jarvis, E. D., Gilbert, M Thomas P & KU, thw266, 2014, In: Science. 346, 6215, 8 p., 1246338.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. E-pub ahead of print

      Complexity of avian evolution revealed by family-level genomes

      Stiller, J., Feng, S., Chowdhury, A-A., Rivas-González, I., Duchêne, D. A., Fang, Q., Deng, Y., Kozlov, A., Stamatakis, A., Claramunt, S., Nguyen, J. M. T., Ho, S. Y. W., Faircloth, B. C., Haag, J., Houde, P., Cracraft, J., Balaban, M., Mai, U., Chen, G., Gao, R. & 32 others, Zhou, C., Xie, Y., Huang, Z., Cao, Z., Yan, Z., Ogilvie, H. A., Nakhleh, L., Lindow, Bent Erik Kramer, Morel, B., Fjeldså, Jon, Hosner, Peter Andrew, Rodrigues da Fonseca, Rute Andreia, Petersen, Bent, Tobias, J. A., Székely, T., Kennedy, J. D., Hart Reeve, A., Liker, A., Stervander, M., Antunes, A., Tietze, D. T., Bertelsen, Mads Frost, Lei, F., Rahbek, Carsten, Graves, G. R., Schierup, M. H., Warnow, T., Braun, E. L., Gilbert, M Thomas P, Jarvis, E. D., Mirarab, S. & KU, thw266, 1 Apr 2024, (E-pub ahead of print) In: Nature. 30 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. Published

      Connecting Earth observation to high-throughput biodiversity data

      Bush, A., Sollmann, R., Wilting, A., Bohmann, K., Cole, B., Balzter, H., Martius, C., Zlinszky, A., Calvignac-Spencer, S., Cobbold, C. A., Dawson, T. P., Emerson, B. C., Ferrier, S., Gilbert, T., Herold, M., Jones, L., Leendertz, F. H., Matthews, L., Millington, J. D. A., Olson, J. R. & 11 others, Ovaskainen, O., Raffaelli, D., Reeve, R., Rödel, M., Rodgers, T. W., Snape, S., Visseren-Hamakers, I., Vogler, A. P., White, P. C. L., Wooster, M. J. & Yu, D. W., 22 Jun 2017, In: Nature Ecology and Evolution. 1, 7, 0176.

      Research output: Contribution to journal › Review › Research › peer-review

    5. Published

      Conservation genomics of the endangered Seychelles Magpie-Robin (Copsychus sechellarum): a unique insight into the history of a precious endemic bird

      Cavill, Emily Louisa, Gopalakrishnan, Shyam, Puetz, Lara Christine, Ribeiro, Â. M., Mak, Sarah Siu Tze, Rodrigues da Fonseca, Rute Andreia, Antunes Pacheco, George, Dunlop, B., Accouche, W., Shah, N., Zora, A., Calabrese, L., Genner, M., Jones, G., Guo, C., KU, thw266 & Gilbert, M Thomas P, 2022, In: Ibis. 164, 2, p. 396-410 15 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      Conservation implications of elucidating the Korean wolf taxonomic ambiguity through whole-genome sequencing

      Hernández-Alonso, G., Ramos-Madrigal, J., Sun, X., Scharff-Olsen, C. H., Sinding, M. H. S., Martins, N. F., Ciucani, M. M., Mak, S. S. T., Lanigan, L. T., Clausen, C. G., Bhak, J., Jeon, S., Kim, C., Eo, K. Y., Cho, S. H., Boldgiv, B., Gantulga, G., Unudbayasgalan, Z., Kosintsev, P. A., Stenøien, H. K. & 2 others, Gilbert, M Thomas P & Gopalakrishnan, Shyam, 2023, In: Ecology and Evolution. 13, 8, 15 p., e10404.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      Contrasting dates of rainforest fragmentation in Africa inferred from trees with different dispersal abilities

      Pineiro, R., Hardy, O. J., Tovar, C., Gopalakrishnan, Shyam, Vieira, Filipe Garrett & Gilbert, M Thomas P, 2019, 19 p. (bioRxiv).

      Research output: Working paper › Preprint › Research

    8. Published

      Contrasting genetic signal of recolonization after rainforest fragmentation in African trees with different dispersal abilities

      Piñeiro, R., Hardy, O. J., Tovar, C., Gopalakrishnan, Shyam, Vieira, Filipe Garrett & Gilbert, M Thomas P, 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 27, 9 p., e2013979118.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Contrasting population-level responses to Pleistocene climatic oscillations in an alpine bat revealed by complete mitochondrial genomes and evolutionary history inference

      Alberdi, A., Gilbert, M Thomas P, Razgour, O., Aizpurua, O., Aihartza, J. & Garin, I., 2015, In: Journal of Biogeography. 42, 9, p. 1689-1700 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Convergent evolution of the genomes of marine mammals

      Foote, A. D., Liu, Y., Thomas, G. W. C., Vinař, T., Alföldi, J., Deng, J., Dugan, S., van Elk, C. E., Hunter, M. E., Joshi, V., Khan, Z., Kovar, C., Lee, S. L., Lindblad-Toh, K., Mancia, A., Nielsen, R., Qin, X., Qu, J., Raney, B. J., Vijay, N. & 6 others, Wolf, J. B. W., Hahn, M. W., Muzny, D. M., Worley, K. C., Gilbert, M Thomas P & Gibbs, R. A., 2015, In: Nature Genetics. 47, 3, p. 272-275 4 p.

      Research output: Contribution to journal › Letter › Research › peer-review

    11. Published

      Convergent transcriptional specializations in the brains of humans and song-learning birds

      Pfenning, A. R., Hara, E., Whitney, O., Rivas, M. V., Wang, R., Roulhac, P. L., Howard, J. T., Wirthlin, M., Lovell, P. V., Ganapathy, G., Mouncastle, J., Moseley, M. A., Thompson, J. W., Soderblom, E. J., Iriki, A., Kato, M., Gilbert, M. T. P., Zhang, G., Bakken, T., Bongaarts, A. & 5 others, Bernard, A., Lein, E., Mello, C. V., Hartemink, A. J. & Jarvis, E. D., 2014, In: Science. 346, 6215, 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    12. Published

      Current perspectives and the future of domestication studies

      Larson, G., Piperno, D. R., Allaby, R. G., Purugganan, M. D., Andersson, L., Arroyo-Kalin, M., Barton, L., Vigueira, C. C., Denham, T., Dobney, K., Doust, A. N., Gepts, P., Gilbert, M. T. P., Gremillion, K. J., Lucas, L., Lukens, L., Marshall, F. B., Olsen, K. M., Pires, J. C., Richerson, P. J. & 4 others, Rubio de Casas, R., Sanjur, O. I., Thomas, M. G. & Fuller, D. Q., 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 17, p. 6139-6146 8 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. Published

      DAMe: a toolkit for the initial processing of datasets with PCR replicates of double-tagged amplicons for DNA metabarcoding analyses

      Zepeda Mendoza, M. L., Bohmann, Kristine, Baez, A. C. & Gilbert, M Thomas P, 2016, In: BMC Research Notes. 9, 13 p., 255.

      Research output: Contribution to journal › Journal article › Research › peer-review

    14. Published

      DNA extraction from dry museum beetles without conferring external morphological damage.

      Gilbert, M Thomas P, Moore, W., Melchior, L. & Worobey, M., 2007, In: PLoS ONE. 2, 3, p. e272

      Research output: Contribution to journal › Journal article › Research › peer-review

    15. Published

      DNA extraction from formalin-fixed material

      Campos, P. & Gilbert, M Thomas P, 2012, Ancient DNA: methods and protocols. Shapiro, B. & Hofreiter, M. (eds.). Humana Press, p. 81-85 5 p. (Methods in Molecular Biology, Vol. 840).

      Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

    16. Published

      DNA extraction from keratin and chitin

      Campos, P. & Gilbert, M Thomas P, 2012, Ancient DNA: methods and protocols. Shapiro, B. & Hofreiter, M. (eds.). Humana Press, p. 43-49 7 p. (Methods in Molecular Biology, Vol. 840).

      Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

    17. Published

      DNA extraction from keratin and chitin

      Campos, P. F. & Gilbert, M Thomas P, 1 Jan 2019, Methods in Molecular Biology. Humana Press, p. 57-63 7 p. (Methods in Molecular Biology, Vol. 1963).

      Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

    18. Published

      DNA from Pre-Clovis Human Coprolites in Oregon, North America.

      Gilbert, M Thomas P, Jenkins, D. L., Götherstrom, A., Naveran, N., Sanchez, J. J., Hofreiter, M., Thomsen, P. F., Binladen, J., Higham, T. F. G., Yohe, R. M., Parr, R., Cummings, L. S. & Willerslev, Eske, 2008, In: Science. 320, 5877, p. 786 - 789

      Research output: Contribution to journal › Journal article › Research › peer-review

    19. Published

      DNA from keratinous tissue. Part I: hair and nail

      Bengtsson, C. F., Olsen, M. E., Brandt, Luise Ørsted, Bertelsen, Mads Frost, Willerslev, Eske, Tobin, D. J., Wilson, A. S. & Gilbert, M Thomas P, 2012, In: Annals of Anatomy. 194, 1, p. 17-25 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. Published

      DNA from keratinous tissue. Part II: feather

      Olsen, M. E., Bengtsson, C. F., Bertelsen, Mads Frost, Willerslev, Eske & Gilbert, M Thomas P, 2012, In: Annals of Anatomy. 194, 1, p. 31-35 5 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Published

      DNA from soil mirrors plant taxonomic and growth form diversity

      Yoccoz, N. G., Bråthen, K. A., Gielly, L., Haile, J. S., Edwards, M. E., Goslar, T., von Stedingk, H., Brysting, A. K., Coissac, E., Pompanon, F., Sønstebo, J. H., Miquel, C., Valentini, A., de Bello, F., Chave, J., Thuiller, W., Wincker, P., Cruaud, C., Gavory, F., Rasmussen, M. & 5 others, Gilbert, M Thomas P, Orlando, L. A. A., Brochmann, C., Willerslev, Eske & Taberlet, P., 1 Aug 2012, In: Molecular Ecology. 21, 15, p. 3647-3655 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Published

      DNA in ancient bone - where is it located and how should we extract it?

      Campos, P., Craig, O. E., Turner-Walker, G., Peacock, E., Willerslev, Eske & Gilbert, M Thomas P, 20 Jan 2012, In: Annals of Anatomy. 194, 1, p. 7-16 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    23. Published

      DNA metabarcoding - need for robust experimental designs to draw sound ecological conclusions

      Zinger, L., Bonin, A., Alsos, I. G., Bálint, M., Bik, H., Boyer, F., Chariton, A. A., Creer, S., Coissac, E., Deagle, B. E., De Barba, M., Dickie, I. A., Dumbrell, A. J., Ficetola, G. F., Fierer, N., Fumagalli, L., Gilbert, M. T. P., Jarman, S., Jumpponen, A., Kauserud, H. & 7 others, Orlando, L., Pansu, J., Pawlowski, J., Tedersoo, L., Thomsen, P. F., Willerslev, Eske & Taberlet, P., 2019, In: Molecular Ecology. 28, 8, p. 1857-1862 6 p.

      Research output: Contribution to journal › Editorial › Research › peer-review

    24. Published

      DNA metabarcoding and spatial modelling link diet diversification with distribution homogeneity in European bats

      Alberdi, Antton, Razgour, O., Aizpurua Arrieta, Ostaizka, Novella-Fernandez, R., Aihartza, J., Budinski, I., Garin, I., Ibanez, C., Izagirre, E., Rebelo, H., Russo, D., Vlaschenko, A., Zhelyazkova, V., Zrncic, V. & Gilbert, M Thomas P, 2020, In: Nature Communications. 11, 8 p., 1154.

      Research output: Contribution to journal › Journal article › Research › peer-review

    25. Published

      DNA-Based Arthropod Diversity Assessment in Amazonian Iron Mine Lands Show Ecological Succession Towards Undisturbed Reference Sites

      Lynggaard, Christina Islas, Yu, D. W., Oliveira, G., Caldeira, C. F., Ramos, S. J., Ellegaard, M. R., Gilbert, M Thomas P, Gastauer, M. & Bohmann, Kristine, 2020, In: Frontiers in Ecology and Evolution. 8, 15 p., 590976.

      Research output: Contribution to journal › Journal article › Research › peer-review

    26. Published

      Darwin's Fancy Revised: An Updated Understanding of the Genomic Constitution of Pigeon Breeds

      Antunes Pacheco, George, van Grouw, H., Shapiro, M. D., Gilbert, M Thomas P & Vieira, Filipe Garrett, 2020, In: Genome Biology and Evolution. 12, 3, p. 136-150 15 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    27. Published

      Debugging diversity – a pan-continental exploration of the potential of terrestrial blood-feeding leeches as a vertebrate monitoring tool

      Schnell, I. B., Bohmann, K., Schultze, S. E., Richter, S. R., Murray, D. C., Sinding, M. H. S., Bass, D., Cadle, J. E., Campbell, M. J., Dolch, R., Edwards, D. P., Gray, T. N. E., Hansen, T., Hoa, A. N. Q., Noer, C. L., Heise-Pavlov, S., Sander Pedersen, A. F., Ramamonjisoa, J. C., Siddall, M. E., Tilker, A. & 7 others, Traeholt, C., Wilkinson, N., Woodcock, P., Yu, D. W., Bertelsen, Mads Frost, Bunce, M. & Gilbert, M Thomas P, 2018, In: Molecular Ecology Resources. 18, 6, p. 1282-1298 17 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    28. Published

      Deep sequencing of RNA from ancient maize kernels

      Fordyce, S. L., Avila Arcos, M. D. C., Rasmussen, M., Cappellini, Enrico, Romero-Navarro, J. A., Wales, N., Alquezar Planas, D. E., Penfield, S., Brown, T. A., Vielle-Calzada, J., Montiel, R., Jørgensen, Tina, Odegaard, N., Jacobs, M., Arriaza, B., Higham, T. F. G., Ramsey, C. B., Willerslev, Eske & Gilbert, M Thomas P, 11 Jan 2013, In: PLoS ONE. 8, 1, 9 p., e50961.

      Research output: Contribution to journal › Journal article › Research › peer-review

    29. Published

      Demographic reconstruction from ancient DNA supports rapid extinction of the great auk

      Thomas, J. E., Carvalho, G. R., Haile, J., Rawlence, N. J., Martin, M. D., Ho, S. Y. W., Sigfusson, A. P., Josefsson, V. A., Frederiksen, M., Linnebjerg, J. F., Castruita, J. A. S., Niemann, J., Sinding, M-H. S., Sandoval-Velasco, M., Soares, A. E. R., Lacy, R., Barilaro, C., Best, J., Brandis, D., Cavallo, C. & 17 others, Elorza, M., Garrett, K. L., Groot, M., Johansson, F., Lifjeld, J. T., Nilson, G., Serjeanston, D., Sweet, P., Fuller, E., Hufthammer, A. K., Meldgaard, Morten, Fjeldså, Jon, Shapiro, B., Hofreiter, M., Stewart, J. R., Gilbert, M Thomas P & Knapp, M., 2019, In: eLife. 8, 35 p., e47509.

      Research output: Contribution to journal › Journal article › Research › peer-review

    30. Published

      Dense sampling of bird diversity increases power of comparative genomics

      Feng, S., Stiller, J., Deng, Y., Armstrong, J., Fang, Q., Hart Reeve, A., Xie, D., Chen, G., Guo, C., Faircloth, B. C., Petersen, B., Wang, Z., Zhou, Q., Diekhans, M., Chen, W., Andreu-Sánchez, S., Margaryan, A., Howard, J. T., Parent, C., Pacheco, G. & 130 others, Sinding, Mikkel Holger Strander, Puetz, Lara Christine, Cavill, Emily Louisa, Ribeiro, Â. M., Eckhart, L., Fjeldså, Jon, Hosner, Peter Andrew, Brumfield, R. T., Christidis, L., Bertelsen, Mads Frost, Sicheritz-Pontén, Thomas, Tietze, D. T., Robertson, B. C., Song, G., Borgia, G., Claramunt, S., Lovette, I. J., Cowen, S. J., Njoroge, P., Dumbacher, J. P., Ryder, O. A., Fuchs, J., Bunce, M., Burt, D. W., Cracraft, J., Meng, G., Hackett, S. J., Ryan, P. G., Jønsson, Knud Andreas, Jamieson, I. G., Rodrigues da Fonseca, Rute Andreia, Braun, E. L., Houde, P., Mirarab, S., Suh, A., Hansson, B., Ponnikas, S., Sigeman, H., Stervander, M., Frandsen, P. B., van der Zwan, H., van der Sluis, R., Visser, C., Balakrishnan, C. N., Clark, A. G., Fitzpatrick, J. W., Bowman, R., Chen, N., Cloutier, A., Sackton, T. B., Edwards, S. V., Foote, D. J., Shakya, S. B., Sheldon, F. H., Vignal, A., Soares, A. E. R., Shapiro, B., González-Solís, J., Ferrer-Obiol, J., Rozas, J., Riutort, M., Tigano, A., Friesen, V., Dalén, L., Urrutia, A. O., Székely, T., Liu, Y., Campana, M. G., Corvelo, A., Fleischer, R. C., Rutherford, K. M., Gemmell, N. J., Dussex, N., Mouritsen, H., Thiele, N., Delmore, K., Liedvogel, M., Franke, A., Hoeppner, M. P., Krone, O., Fudickar, A. M., Milá, B., Ketterson, E. D., Fidler, A. E., Friis, G., Parody-Merino, Á. M., Battley, P. F., Cox, M. P., Lima, N. C. B., Prosdocimi, F., Parchman, T. L., Schlinger, B. A., Loiselle, B. A., Blake, J. G., Lim, H. C., Day, L. B., Fuxjager, M. J., Baldwin, M. W., Braun, M. J., Wirthlin, M., Dikow, R. B., Ryder, T. B., Camenisch, G., Keller, L. F., Dacosta, J. M., Hauber, M. E., Louder, M. I. M., Witt, C. C., McGuire, J. A., Mudge, J., Megna, L. C., Carling, M. D., Wang, B., Taylor, S. A., Del-Rio, G., Aleixo, A., Vasconcelos, A. T. R., Mello, C. V., Weir, J. T., Haussler, D., Li, Q., Yang, H., Wang, J., Lei, F., Rahbek, Carsten, Gilbert, M Thomas P, Graves, G. R., Jarvis, E. D., Paten, B. & KU, thw266, 2020, In: Nature. 587, 7833, p. 252-257

      Research output: Contribution to journal › Journal article › Research › peer-review

    31. Published

      Diabetic cats have decreased gut microbial diversity and a lack of butyrate producing bacteria

      Kieler, Ida Nordang, Osto, M., Hugentobler, L., Puetz, Lara Christine, Gilbert, M Thomas P, Hansen, Torben, Pedersen, Oluf Borbye, Reusch, C. E., Zini, E., Lutz, T. A. & Bjørnvad, Charlotte Reinhard, 2019, In: Scientific Reports. 9, p. 1-13 13 p., 4822.

      Research output: Contribution to journal › Journal article › Research › peer-review

    32. Published

      Differential expression profiling of heat stressed tardigrades reveals major shift in the transcriptome

      Neves, R. C., Møbjerg, A., Kodama, M., Ramos Madrigal, Jazmin, Gilbert, M Thomas P & Møbjerg, Nadja, 2022, In: Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology. 267, 7 p., 111169.

      Research output: Contribution to journal › Journal article › Research › peer-review

    33. Published

      Dire wolves were the last of an ancient New World canid lineage

      Perri, A. R., Mitchell, K. J., Mouton, A., Alvarez-Carretero, S., Hulme-Beaman, A., Haile, J., Jamieson, A., Meachen, J., Lin, A. T., Schubert, B. W., Ameen, C., Antipina, E. E., Bover, P., Brace, S., Carmagnini, A., Carøe, C., Samaniego Castruita, J. A., Chatters, J. C., Dobney, K., dos Reis, M. & 29 others, Evin, A., Gaubert, P., Gopalakrishnan, Shyam, Gower, Graham, Heiniger, H., Helgen, K. M., Kapp, J., Kosintsev, P. A., Linderholm, A., Ozga, A. T., Presslee, S., Salis, A. T., Saremi, N. F., Shew, C., Skerry, K., Taranenko, D. E., Thompson, M., Sablin, M. V., Kuzmin, Y. V., Collins, Matthew James, Sinding, M. S., Gilbert, M Thomas P, Stone, A. C., Shapiro, B., Van Valkenburgh, B., Wayne, R. K., Larson, G., Cooper, A. & Frantz, L. A. F., 2021, In: Nature. 591, p. 87-91

      Research output: Contribution to journal › Journal article › Research › peer-review

    34. Published

      Direct evidence of extensive diversity of HIV-1 in Kinshasa by 1960

      Worobey, M., Gemmel, M., Teuwen, D. E., Haselkorn, T., Kunstman, K., Bunce, M., Muyembe, J., Kabongo, J. M., Kalengayi, R. M., Van Marck, E., Gilbert, M Thomas P & Wolinsky, S. M., 2008, In: Nature. 455, 7213, p. 661-4 3 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    35. Published

      Direct evidence of milk consumption from ancient human dental calculus

      Warinner, C., Hendy, J., Speller, C., Cappellini, E., Fischer, R., Trachsel, C., Arneborg, J., Lynnerup, N., Craig, O., Swallow, D. M., Fotakis, A. K., Christensen, R. J., Olsen, J. V., Liebert, A., Montalva, N., Fiddyment, S., Mackie, M., Canci, A., Bouwman, A., Ruhli, F. & 2 others, Gilbert, M Thomas P & Collins, M. J., 2015, In: American Journal of Physical Anthropology. 156, Suppl. 60, p. 319 1 p.

      Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

    36. Published

      Direct evidence of milk consumption from ancient human dental calculus

      Warinner, C., Hendy, J., Speller, C., Cappellini, E., Fischer, R., Trachsel, C., Arneborg, J., Lynnerup, N., Craig, O. E., Swallow, D. M., Fotakis, A. K., Jersie-Christensen, R. R., Olsen, J. V., Liebert, A., Montalva, N., Fiddyment, S., Charlton, S., Mackie, M. E., Canci, A., Bouwman, A. & 3 others, Rühli, F., Gilbert, M Thomas P & Collins, M. J., 2014, In: Scientific Reports. 4, 6 p., 7104.

      Research output: Contribution to journal › Journal article › Research › peer-review

    37. Published

      Dirt, dates and DNA: OSL and radiocarbon chronologies of perennially-frozen sediments in Siberia, and their implications for sedimentary ancient DNA studies

      Arnold, L. J., Roberts, R. G., MacPhee, R. D. E., Haile, James Seymour, Brock, F., Möller, P., Froese, D. G., Tikhonov, A. N., Chivas, A. R., Gilbert, M Thomas P & Willerslev, Eske, 2011, In: Boreas. 40, 3, p. 417-445 29 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    38. Published

      Disentangling host–microbiota complexity through hologenomics

      Alberdi, Antton, Andersen, Sandra Breum, Limborg, Morten Tønsberg, Dunn, Rob & Gilbert, M Thomas P, 2022, In: Nature Reviews Genetics. 23, 5, p. 281-297 17 p.

      Research output: Contribution to journal › Review › Research › peer-review

    39. Published

      Distribution patterns of postmortem damage in human mitochondrial DNA

      Gilbert, M Thomas P, Willerslev, Eske, Hansen, Anders Johannes, Barnes, I., Rudbeck, L., Lynnerup, Niels & Cooper, A., 2002, In: American Journal of Human Genetics. 72, 1, p. 32-47 15 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    40. Published

      Diverse plant and animal genetic records from Holocene and Pleistocene sediments

      Willerslev, Eske, Hansen, Anders Johannes, Binladen, J., Brand, T. B., Gilbert, M Thomas P, Shapiro, B., Bunce, M., Wiuf, C., Gilichinsky, D. A. & Cooper, A., 2003, In: Science. 300, 5620, p. 791-5

      Research output: Contribution to journal › Journal article › Research › peer-review

    41. Published

      Do vertebrate gut metagenomes confer rapid ecological adaptation?

      Alberdi, Antton, Aizpurua Arrieta, Ostaizka, Bohmann, Kristine, Zepeda Mendoza, M. L. & Gilbert, M Thomas P, Sep 2016, In: Trends in Ecology & Evolution. 31, 9, p. 689-699 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    42. Published

      Draft genome of the fungus-growing termite pathogenic fungus Ophiocordyceps bispora (Ophiocordycipitaceae, Hypocreales, Ascomycota)

      Conlon, B. H., Mitchell, J., de Beer, Z. W., Carøe, C., Gilbert, M Thomas P, Eilenberg, Jørgen, Poulsen, Michael & de Fine Licht, Henrik Hjarvard, 2017, In: Data in Brief. 11, p. 537-542 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    43. Published

      Dynamic evolution of the alpha (α) and beta (β) keratins has accompanied integument diversification and the adaptation of birds into novel lifestyles

      Greenwold, M. J., Bao, W., Jarvis, E. D., Hu, H., Li, C., Gilbert, M Thomas P, KU, thw266 & Sawyer, R. H., 2014, In: B M C Evolutionary Biology. 14, 16 p., 249.

      Research output: Contribution to journal › Journal article › Research › peer-review

    44. Published

      Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny

      Cappellini, E., Welker, F., Pandolfi, L., Ramos-Madrigal, J., Samodova, D., Rüther, P. L., Fotakis, A. K., Lyon, D., Moreno-Mayar, J. V., Bukhsianidze, M., Rakownikow Jersie-Christensen, R., Mackie, M., Ginolhac, A., Ferring, R., Tappen, M., Palkopoulou, E., Dickinson, M. R., Stafford, T. W., Chan, Y. L., Götherström, A. & 23 others, Nathan, S. K. S. S., Heintzman, P. D., Kapp, J. D., Kirillova, I., Moodley, Y., Agusti, J., Kahlke, R. D., Kiladze, G., Martínez-Navarro, B., Liu, Shanlin, Sandoval-Velasco, Marcela, Sinding, Mikkel Holger Strander, Kelstrup, C. D., Allentoft, Morten Erik, Orlando, L., Penkman, K., Shapiro, B., Rook, L., Dalén, L., Gilbert, M Thomas P, Olsen, Jesper Velgaard, Lordkipanidze, D. & Willerslev, Eske, 2019, In: Nature. 574, 7776, p. 103-107

      Research output: Contribution to journal › Journal article › Research › peer-review

    45. Published

      Earth BioGenome Project: sequencing life for the future of life

      Lewin, H. A., Robinson, G. E., Kress, W. J., Baker, W. J., Coddington, J., Crandall, K. A., Durbin, R., Edwards, S. V., Forest, F., Gilbert, M. T. P., Goldstein, M. M., Grigoriev, I. V., Hackett, K. J., Haussler, D., Jarvis, E. D., Johnson, W. E., Patrinos, A., Richards, S., Castilla-Rubio, J. C., van Sluys, M-A. & 4 others, Soltis, P. S., Xu, X., Yang, H. & KU, thw266, 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 17, p. 4325-4333 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    46. Published

      Ecological and evolutionary divergence in whales and dolphins

      Foote, A. D., Gilbert, M Thomas P & Jackson, J. A., 2010, Whales and dolphins: behavior, biology and distribution. Murray, C. A. (ed.). Nova Science Publishers, p. 89-112 24 p. (Animal Science, Issues and Professions).

      Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

    47. Published

      Ecological, morphological and genetic divergence of sympatric North Atlantic killer whale populations

      Foote, A. D., Newton, J., Piertney, S. B., Willerslev, Eske & Gilbert, M Thomas P, 2009, In: Molecular Ecology. 18, 24, p. 5207-17 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    48. Published

      Eggshell palaeogenomics: palaeognath evolutionary history revealed through ancient nuclear and mitochondrial DNA from Madagascan elephant bird (Aepyornis sp.) eggshell

      Grealy, A., Phillips, M., Miller, G., Gilbert, M Thomas P, Rouillard, J., Lambert, D., Bunce, M. & Haile, J., Apr 2017, In: Molecular Phylogenetics and Evolution. 109, p. 151-163 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    49. Published

      Enriching captivity conditions with natural elements does not prevent the loss of wild-like gut microbiota but shapes its compositional variation in two small mammals

      Koziol, Adam Leslie, Larrañaga, Iñaki Odriozola, Jessen, Lasse Nyholm, Leonard, Aoife Mary, San Jose, C., Pauperio, J., Ferreira, C., Hansen, Anders Johannes, Aizpurua Arrieta, Ostaizka, Gilbert, M Thomas P & Alberdi, Antton, 2022, In: MicrobiologyOpen. 11, 5, 19 p., e1318.

      Research output: Contribution to journal › Journal article › Research › peer-review

    50. Published

      Environmental DNA for wildlife biology and biodiversity monitoring

      Bohmann, Kristine, Evans, A., Gilbert, M Thomas P, Carvalho, G. R., Creer, S., Knapp, M., Yu, D. W. & de Bruyn, M., 2014, In: Trends in Ecology & Evolution. 29, 6, p. 358-367 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

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