Eske Willerslev
Professor
Section for Geogenetics
Øster Voldgade 5-7
1350 København K
Introductory remarks on publicationslist
Some selected publications:
Moreno-Mayar VJ, Potter BA, Vinner L, Steinrücken M, Rasmussen S, Terhorst J, Kamm JA, Albrechtsen A, Malaspinas A-S, Sikora M, Reuther JD, Irish JD, Malhi RS, Orlando L, Song YS, Nielsen R, Meltzer DJ and Eske Willerslev. Terminal Pleistocene Alaskan genome reveals first founding population of Native Americans. Nature (in press).
Nielsen R, Akey JM, Jakobsson M, Pritchard JK, Tishkoff S, and Willerslev E. Tracing the peopling of the world through genomics. Nature. (2017)
Sikora M, Seguin-Orlando A, Sousa VC, Albrechtsen A, Korneliussen T, Ko A, Rasmussen S, Dupanloup I, Nigst PR, Bosch MD, Renaud G, Allentoft ME, Margaryan A, Vasilyev SV, Veselovskaya E, Borutskaya SB, Deviese T, Comeskey D, Higham T, Manica A, Foley R, Meltzer DJ, Nielsen R, Excoffier L, Lahr MM, Orlando LA, Willerslev E. Ancient genomes show social and reproductive behavior of early Upper Paleolithic foragers. Science, eaao1807. (2017)
Malaspinas A-S, Westaway MC, Mulle C, Sousa VC, Lao O, Alves I, Bergström A, Athanasiadis G, Cheng JY, Crawford JE, Heupink TH, Macholdt E, Peisch S, Rasmussen S, Schiffels S, Subramanian S, Wright JL, Albrechtsen A, Barbieri C, Dupanloup I, Eriksson A, Margaryan A, Moltke I, Pugach I, Korneliussen TS, Levkivskyi IP, Moreno-Mayar JV, Ni S, Racimo F, Sikora M, YaliXue, Aghakhanian FA, Brucato N, Brunak S, Campos PF, Clark W, Ellingvåg S, Fourmile G, Gerbault P, Injie D, Kok G, Leavesley M, Logan B, Lynch A, Matisoo-Smith EA, McAllister PJ, Mentzer AJ, Metspalu M, Migliano AB, Murgha L, Phipps ME, Pomat W, Reynolds D, Ricaut F-X, Siba P, Thomas MG, Wales T, Wall C, Oppenheimer SJ, Tyler-Smith C, Durbin R, Dortch J, Manica A, Schierup MH, Foley R Lahr MM, Bowern C, Wall JD, Mailund T, Stoneking M, Nielsen R, Sandhu MS, Excoffier L, Lambert DM, and Willerslev E. A Genomic History of Aboriginal Australia. Nature (2016)
Pedersen MW, Overballe-Petersen S, Ermini L, Der Sarkissian C, Haile J, Hellstrom M, Spens J, Thomsen, Kristine PF, Bohmann K, Cappellini E, Schnell IB, Wales NA, Carøe C, Campos PF, Schmidt AMZ, Gilbert MTP, Hansen AJH, Orlando L, and Willerslev E (2015) Phil. Trans. B. Ancient and modern environmental DNA 370, Article Number: 20130383
Raghavan M, Steinrücken M, Harris K, Schiffels S, Rasmussen S, DeGiorgio M, Albrechtsen A, Valdiosera C, Ávila-Arcos MC, Malaspinas AS, Eriksson A, Moltke I, Metspalu M, Homburger JR, Wall J, Cornejo OE, Moreno-Mayar JV, Korneliussen TS, Pierre T, Rasmussen M, Campos PF, Damgaard PB, Allentoft ME, Lindo J, Metspalu E, Rodríguez-Varela R, Mansilla J, Henrickson C, Seguin-Orlando A, Malmström H, Stafford T Jr, Shringarpure SS, Moreno-Estrada A, Karmin M, Tambets K, Bergström A, Xue Y, Warmuth V, Friend AD, Singarayer J, Valdes P, Balloux F, Leboreiro I, Vera JL, Rangel-Villalobos H, Pettener D, Luiselli D, Davis LG, Heyer E, Zollikofer CP, Ponce de León MS, Smith CI, Grimes V, Pike KA, Deal M, Fuller BT, Arriaza B, Standen V, Luz MF, Ricaut F, Guidon N, Osipova L, Voevoda MI, Posukh OL, Balanovsky O, Lavryashina M, Bogunov Y, Khusnutdinova E, Gubina M, Balanovska E, Fedorova S, Litvinov S, Malyarchuk B, Derenko M, Mosher MJ, Archer D, Cybulski J, Petzelt B, Mitchell J, Worl R, Norman PJ, Parham P, Kemp BM, Kivisild T, Tyler-Smith C, Sandhu MS, Crawford M, Villems R, Smith DG, Waters MR, Goebel T, Johnson JR, Malhi RS, Jakobsson M, Meltzer DJ, Manica A, Durbin R, Bustamante CD, Song YS, Nielsen R, Willerslev E. Genomic evidence for the Pleistocene and recent population history of Native Americans (2015) Science. Jul 21. pii: aab3884.
Rasmussen M, Sikora M, Albrechtsen A, Korneliussen TS, Moreno-Mayar JV, Poznik GD, Zollikofer CPE, Ponce de León MS, Allentoft ME, Moltke I, Jónsson H, Valdiosera C, Malhi RS, Orlando L, Bustamante CD, Stafford Jr T, Meltzer DJ, Nielsen R, and Willerslev E (2015) The ancestry and affiliations of Kennewick Man. Nature doi:10.1038/nature14625
Rasmussen S, Allentoft ME, Nielsen HB, Brunak S, Avetisyan P, Epimakhov A, Gnuni A, Kriiska A, Lasak I, Metspalu M, Moiseyev V, Gromov A, Pokutta D, Saag L, Varul L, Yepiskoposyan L, Sicheritz-Pontén T, Foley RA, Lahr MM, Nielsen R, Kristiansen K., Willerslev E. (2015) Early Divergent strains of Yersinia pestis in Eurasia five thousands years ago. Cell, 163, 571–582
Allentoft ME, Sikora M, Sjögren K-G, Rasmussen S, Rasmussen M, Stenderup J, Damgaard PB, Schroeder H, Ahlström T, Vinner L, Malaspinas A-S, Margaryan A, Higham T, Chivall D, Lynnerup N, Harvig L, Baron J, Casa PD, Dąbrowski P, Duffy PR, Ebel AV, Epimakhov A, Frei K, Furmanek M, Gralak T, Gromov A, Gronkiewicz S, Grupe G, Hajdu T, Jarysz R, Khartanovich V, Khokhlov A, Kiss V, Kolář J, Kriiska A, Lasak I, Longhi C, McGlynn G, Merkevicius A, Merkyte I, Metspalu M, Mkrtchyan R, Moiseyev V, Paja L, Pálfi G, Pokutta D, Pospieszny L, Price TD, Saag L, Sablin M, Shishlina N, Smrčka VC, Soenov VI, Szeverényi V, Tóth G, Trifanova SV, Varul L, Vicze M, Yepiskoposyan L, Zhitenev V, Orlando L, Sicheritz-Pontén T, Brunak S, Nielsen R, Kristiansen K and Eske Willerslev (2015). Population genomics of Bronze Age Eurasia. Nature 522, 167–172
Seguin-Orlando A, Korneliussen TS, Sikora M, Malaspinas AS, Manica A, Moltke I, Albrechtsen A, Ko A, Margaryan A, Moiseyev V, Goebel T, Westaway M, Lambert D, Khartanovich V, Wall JD, Nigst PR, Foley RA, Lahr MM, Nielsen R, Orlando L, and Willerslev E (2014) Genomic structure in Europeans dating back at least 36,200 years. Science. Nov 6. pii: aaa0114.
Raghavan M, DeGiorgio M, Albrechtsen A, Moltke I, Skoglund P, Korneliussen TS, Grønnow B, Appelt M, Gulløv HC, Friesen TM, Fitzhugh W, Malmström H, Rasmussen S, Olsen J, Melchior L, Fuller BT, Fahrni SM, Stafford Jr. T, Grimes V, Renouf MAP, Cybulski J, Lynnerup N, Lahr MM, Britton K, Knecht R, Arneborg J, Metspalu M, Cornejo OE, Malaspinas A-S, Wang Y, Rasmussen M, Raghavan V, Hansen TVO, Khusnutdinova E, Pierre T, Dneprovsky K, Andreasen C, Lange H, Hayes MG, Coltrain J, Spitsyn VA, Götherström A, Orlando L, Kivisild T, Villems R, Crawford MH, Nielsen FC, Dissing J, Heinemeier J, Meldgaard M, Bustamante C, O’Rourke DH, Jakobsson M, Gilbert MTP, Nielsen R, and Willerslev E (2014) The Genetic Prehistory of the New World Arctic Science 345 6200-6204.
Rasmussen. M, Anzick SL, Waters MR, Skoglund P, DeGiorgio M, Stafford Jr. TW, Rasmussen S, Moltke I, Albrechtsen A, Doyle SM, Poznik GD, Gudmundsdottir V, Yadav R, Malaspinas A-S, White SS, Allentoft ME, Cornejo OE, Tambets K, Eriksson A, Heintzman PD, Karmin M, Korneliussen TS, Meltzer DJ, Pierre TL, Stenderup J, Saag L, Warmuth V, Lopes MC, Malhi RS, Brunak S, Sicheritz-Ponten T, Barnes I, Collins M, Orlando L, Balloux F, Manica A, Gupta R, Metspalu M, Bustamante CD, Jakobsson M, Nielsen R, and Willerslev E (2014) The genome of a late Pleistocene human from a Clovis burial site in western Montana Nature 506, 225-229.
Willerslev E, Davison J, Moora M, Zobel M, Coissac E, Edwards ME, Lorenzen ED, Vestergård M, Gussarova G, Haile H, Craine J, Bergmann G, Gielly L, Boessenkool S, Epp LS, Pearman PB, Cheddadi R, Murray D, Bråthen KA Yoccoz N, Binney H, Cruaud C, Wincker P, Goslar T, Alsos IG, Bellemain E, Brysting AK, Elven R, Sønstebø JH, Murton J, Sher A, Rasmussen M, Rønn R, Mourier T, Cooper A, Austin J, Möller P, Froese D, Zazula G, Pompanon F, Rioux D, Niderkorn V, Tikhonov A, Savvinov G, Roberts RG, MacPhee RDE, Gilbert MTP, Kjær K, Orlando L, Brochmann C, Taberlet P. (2014) Fifty thousand years of arctic vegetation and megafaunal diet Nature 506, 47-51.
Raghavan M, Skoglund P, Graf K, Metspalu M, Albrechtsen A, Moltke I, Rasmussen S, Stafford TW, Orlando O, Metspalu E, Karmin M, Tambets K, Rootsi S, Mägi R, Campos PF, Balanovska E, Balanovsky O, Khusnutdinova E, Litvinov S, Osipova LP, Fedorova SA, Voevoda MI, DeGiorgio M, Sicheritz-Ponten T, Brunak S, Demeshchenko S, Kivisild T, Villems R,Nielsen R, Jakobsson M, and Willerslev E (2014) Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans Nature 505, 87-91.
Overballe-Petersen S, Harms K, Orlando LAA, Mayar JVM, Rasmussen S, Dahl TW, Rosing MT, Poole AM, Sicheritz-Ponten T, Brunak B, Inselmann S, de Vries J, Wackernagel W, Pybus OG, Nielsen R, Johnsen PJ, Nielsen KM, and Eske Willerslev (2013) Bacterial Natural Transformation by Highly Fragmented and Damaged DNA Proc. Natl. Acad. Sci. USA. 110, 19860-19865.
Orlando L, Ginolhac A, Zhang G, Froese D, Albrechtsen A, Stiller M, Schubert M, Cappellini E, Petersen B, Moltke I, Johnson PLF, Fumagalli M, Vilstrup JT, Raghavan M, Korneliussen T, Malaspinas A-S, Vogt S, Szklarczyk D, Kelstrup CD, Vinther J, Dolocan A, Stenderup J, Missael A, Velazquez A, Cahill J, Rasmussen M, Wang X, Min J, Zazula G, Seguin-Orlando A, Mortensen C, Magnussen K, Thompson JF, Weinstock J, Gregersen K, Røed KH, Eisenmann V, Rubin C-J, Miller DC, Antczak D, Bertelsen MF, Brunak S, Khaled AL-R, Ryder O, Andersson L, Mundy J, Krogh A, Gilbert MTP, Kjær K, Sicheritz-Ponten T, Jensen LJ, Olsen JV, Hofreiter M, Nielsen R, Shapiro B, Jun W, and Willerslev E. (2013) Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse. Nature 499, 74-77
Kjær K, Khan SA, Korsgaard NJ, Wahr J, Bamber JL, Hurkmans R, van den Broeke M, Timm LH, Kjeldsen KK, Bjørk AA, Larsen NK, Jørgensen LT, Færch-Jensen A, and Willerslev E. (2012). Aerial Photographs Reveal Late–20th-Century Dynamic Ice Loss in Northwestern Greenland Science 337, 569-573.
Jenkins DJ, Davis LG, Stafford Jr. T, Campos PF, Hockett B, Jones GT, Cummings LS, Yost C, Connolly TJ, Yohe II RM, Gibbons SC, Raghavan M, Rasmussen M, Paijmans JLA, Hofreiter M, Kemp BM, Barta JL, Monroe C, Gilbert MTP, and Willerslev E. (2012) Clovis Age Western Stemmed Projectile Points and Human Coprolites at the Paisley Caves Science 337, 223-228.
Parducci L, Jørgensen T, Tollefsrud MM, Elverland E, Alm T, Fontana SL, Bennett KD, Haile JH, Matetovici I, Suyama Y, Edwards ME, Andersen K, Rasmussen M, Boessenkool S, Coissac E, Christian Brochmann, Pierre Taberlet, Michael Houmark-Nielsen, Nicolaj Krog Larsen, Orlando L, Gilbert MTP, Kjær KH, Alsos IG, and Willerslev E. (2012) Glacial Survival of Boreal Trees in Northern Scandinavia. Science 335, 1083-1086
Waters MR, Stafford TW Jr, McDonald HG, Gustafson C, Rasmussen M, Cappellini E, Olsen JV, Szklarczyk D, Jensen LJ, Gilbert MTP, and Willerslev E. (2011) Pre-Clovis Mastodon Hunting 13,800 Years Ago at the Manis Site, Washington. Science 334, 351-353
Lorenzen ED, Nogués-Bravo D, Orlando L, Weinstock J, Binladen J, Marske KA, Ugan A, Borregaard MK, Gilbert MT, Nielsen R, Ho SY, Goebel T, Graf KE, Byers D, Stenderup JT, Rasmussen M, Campos PF, Leonard JA, Koepfli KP, Froese D, Zazula G, Stafford TW Jr, Aaris-Sørensen K, Batra P, Haywood AM, Singarayer JS, Valdes PJ, Boeskorov G, Burns JA, Davydov SP, Haile J, Jenkins DL, Kosintsev P, Kuznetsova T, Lai X, Martin LD, McDonald HG, Mol D, Meldgaard M, Munch K, Stephan E, Sablin M, Sommer RS, Sipko T, Scott E, Suchard MA, Tikhonov A, Willerslev R, Wayne RK, Cooper A, Hofreiter M, Sher A, Shapiro B, Rahbek C, Willerslev E. 2011: Species-specific responses of Late Quaternary magefauna to climate and humans. Nature 479,359-64.
Funder S, Gosse H, Jepsen, Kaas E, Kjær KJ, Koesgaard NJ, Larsen NK, Linderson H, Lyså A, Möller P, Olsen J, and Willerslev E. (2011) A 10,000-year record of Arctic Ocean sea ice variability – View from the beach Science 333, 747-750.
Rasmussen M, Guo X, Wang Y, Lohmueller KE, Rasmussen S, Albrechtsen A, Skotte L, Lindgreen S, Metspalu M, Jombart T, Kivisild T, Zhai W, Eriksson A, Manica A, Orlando L, De La Vega F, Tridico S, Metspalu E, Nielsen K, Ávila-Arcos MC, Moreno-Mayar JV, Muller C, Dortch J, Gilbert MTP, Lund O, Wesolowska A, Karmin M, Weiner LA, Wang B, Li J, Tai S, Xiao F, Hanihara T, van Driem G, Jha AR, Ricaut F-X, de Knijff P, Migliano AB, Gallego-Romero I, Kristiansen K, Lambert DM, Brunak S, Forster P, Brinkmann B, Nehlich O, Bunce M, Richards M, Gupta R, Bustamante C, Krogh A, Foley RA, Lahr MM, Balloux F, Sicheritz-Pontén T, Villems R, Nielsen R, Jun W, Willerslev E. 2012. An Aboriginal Australian genome reveals separate human dispersals into Asia. Science 334,94-98.
Rasmussen M, Li Y, Lindgreen S, JS Pedersen, Albrechtsen A, Moltke I, Metspalu M, Metspalu E, Kivisild T, Gupta R, Bertalan M, Nielsen K, Gilbert MTP, Wang Y, Raghavan M, Campos PF, Kamp HM, Wilson AS, Gledhill A, Tridico S, Bunce M, Lorenzen ED, Binladen J, Guo X, Zhao J, Zhang X, Zhang H, Li Z, Chen M, Orlando L, Kristiansen K, Bak M, Tommerup N, Bendixen C, Pierre T, Grønnow B, Meldgaard M, Andreasen C, Fedorova SA, Osipova LP, Higham T, Ramsey CB, Hansen vO, Nielsen FC, Crawford MH, Brunak S, Sicheritz-Pontén T, Villems R, Nielsen R, Krogh A, Wang J, and Willerslev E. (2010) Ancient genome sequence of an extinct palaeo-eskimo. Nature 463, 757–762.
Gilbert MT, Kivisild T, Grønnow B, Andersen PK, Metspalu E, Reidla M, Tamm E, Axelsson E, Götherström A, Campos PF, Rasmussen M, Metspalu M, Higham TF, Schwenninger JL, Nathan R, De Hoog CJ, Koch A, Møller LN, Andreasen C, Meldgaard M, Villems R, Bendixen C, Willerslev E. (2008) Paleo-Eskimo mtDNA Genome Reveals Matrilineal Discontinuity in Greenland. Science 320, 1787-1789.
Johnson SS, Hebsgaard MB, Christensen T, Mastepanov M, Nielsen R, Munch K, Brand TB. Gilbert MTP, Zuber MT, Bunce M, Rønn R, Gilichinsky D, Froese D, and Willerslev E. (2007) Ancient bacteria show evidence of DNA repair. Proc. Natl. Acad. Sci. USA 104, 14401-14405
Willerslev E, Cappellini E, Boomsma W, Nielsen R, Hebsgaard MB, Brand TB, Hofreiter M, Bunce M, Poinar HN, Dahl-Jensen D, Johnsen S, Steffensen JP, Bennike O, Funder S, Schwenninger J-L, Nathan R, Armitage S, Barker J, Sharp M, Penkman KEH, Haile J, Taberlet P, MTP Gilbert, Casoli A, Campani E, Collins MJ. (2007) Ancient Biomolecules from Deep Ice Cores Reveal a Forested Southern Greenland. Science 317, 111-114
Willerslev E, Hansen AJ, Røn R, Brand TB, Wiuf C, Barnes I, Gilichinsky DA, Mitchell D, Cooper A. (2004) Long-term survival of bacterial DNA. Curr. Biol. 14, R9-R10
Willerslev E, and Cooper A. (2005) Ancient DNA. Proc. Royal Soc. Lon. B 272, 3-16
Glenner H, Hansen AJ, Sørensen MV, Ronquist F, Huelsenbeck JP, Willerslev E. (2004) Bayesian Inference of the metazoan phylogeny: A combined molecular and morphological approach. Curr. Biol. 14, 1644-1649
Willerslev E, Hansen AJ, Brand T, Binladen J, Gilbert TMP, Shapiro BA, Wiuf C, Gilichinsky DA, Cooper A. (2003) Diverse plant and animal DNA from Holocene and Pleistocene sedimentary records Science 300, 791-795
Willerslev E, Hansen AJ, Nielsen KK, Adsersen H (2002) Number of endemic and native plant species in the Galápagos Archipelago in relation to geographical parameters. Ecography 25, 109-119
Willerslev E, Hansen AJ, Christensen B, Steffensen JP, Arctander P. (1999) Diversity of Holocene life-forms in fossil glacier ice. Proc. Natl. Acad. Sci. USA 96, 8017-8021
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The prehistoric peopling of Southeast Asia
McColl, H., Racimo, F., Vinner, L., Demeter, F. P. M., Gakuhari, T., Moreno Mayar, J. V., van Driem, G., Gram Wilken, U., Seguin-Orlando, A., de la Fuente Castro, C. P., Wasef, S., Shoocongdej, R., Souksavatdy, V., Sayavongkhamdy, T., Saidin, M. M., Allentoft, M. E., Sato, T., Malaspinas, A-S., Aghakhanian, F. A., Korneliussen, T. S. & 46 others, , 6 Jul 2018, In: Science (New York, N.Y.). 361, 6397, p. 88-92 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Late Pleistocene Faunal Assemblages from Karst Cave Settings on Northern Vancouver Island, Canada
McLaren, D., Wigen, R., Fedje, D., Dyck, A., Hebda, C. F. G., Morien, E., Pedersen, Mikkel Winther, Willerslev, Eske, Rutledge, L. Y., Barrera, M. A., Stafford, J., Wall, D. & Letham, B., 2023, In: PaleoAmerica. 9, 3, p. 216-236 21 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Evaluating the impact of domestication and captivity on the horse gut microbiome
Metcalf, J. L., Song, S. J., Morton, J. T., Weiss, S., Seguin-Orlando, A., Joly, F., Feh, C., Taberlet, P., Coissac, E., Amir, A., Willerslev, Eske, Knight, R., McKenzie, V. & Orlando, L. A. A., 14 Nov 2017, In: Scientific Reports. 7, 9 p., 15497.Research output: Contribution to journal › Journal article › Research › peer-review
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Application of full mitochondrial genome sequencing using 454 GS FLX pyrosequencing
Mikkelsen, M., Rockenbauer, Eszter, Wächter, A., Fendt, L., Zimmermann, B., Parson, W., Nielsen, S. A., Gilbert, M Thomas P, Willerslev, Eske & Morling, Niels, 2009, Progress in Forensic Genetics 13: Proceedings of the 23rd International ISFG Congress. Morling, N. (ed.). Elsevier, Vol. 2. p. 518 - 519 2 p. (Forensic Science International: Genetics Supplement Series; No. 1, Vol. 2).Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review
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Damage and repair of ancient DNA
Mitchell, D., Willerslev, Eske & Hansen, Anders Johannes, 2005, In: Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis. 571, 1-2, p. 265-76 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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High-Throughput Sequencing-Based Investigation of Viruses in Human Cancers by Multienrichment Approach
Mollerup, S., Asplund, M., Friis-Nielsen, J., Kjartansdóttir, K. R., Fridholm, H., Hansen, T. A., Herrera, J. A. R., Barnes, C. J., Jensen, R. H., Richter, S. R., Nielsen, I. B., Pietroni, C., Alquezar-Planas, D. E., Rey-Iglesia, A., Olsen, P. V. S., Rajpert-De Meyts, E., Groth-Pedersen, L., von Buchwald, C., Jensen, D. H., Gniadecki, R. & 20 others, , 15 Oct 2019, In: The Journal of Infectious Diseases. 220, 8, p. 1312-1324Research output: Contribution to journal › Journal article › Research › peer-review
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Cutavirus in cutaneous malignant melanoma
Mollerup, S., Fridholm, E. M. H., Vinner, Lasse, Kjartansdóttir, K. R., Friis-Nielsen, J., Asplund, M., Romero, J. A. H., Steiniche, T., Mourier, T., Brunak, Søren, Willerslev, Eske, Izarzugaza, J. M. G., Hansen, Anders Johannes & Nielsen, L. P., Feb 2017, In: Emerging Infectious Diseases . 23, 2, p. 363-365 3 p.Research output: Contribution to journal › Letter › Research › peer-review
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Identifying a living great-grandson of the Lakota Sioux leader Tatanka Iyotake (Sitting Bull)
Moltke, Ida, Korneliussen, Thorfinn Sand, Seguin-Orlando, A., Moreno Mayar, J. Víctor, LaPointe, E., Billeck, W. & Willerslev, Eske, 2021, In: Science Advances. 7, 44, 7 p., eabh2013.Research output: Contribution to journal › Journal article › Research › peer-review
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Terminal Pleistocene Alaskan genome reveals first founding population of Native Americans
Moreno Mayar, J. Víctor, Potter, B. A., Vinner, Lasse, Steinrucken, M., Rasmussen, Simon, Terhorst, J., Kamm, J. A., Albrechtsen, Anders, Malaspinas, A., Sikora, Martin, Reuther, J. D., Irish, J. D., Malhi, R. S., Orlando, L. A. A., Song, Y. S., Nielsen, Rasmus, Meltzer, D. J. & Willerslev, Eske, 2018, In: Nature Genetics. 553, 7687, p. 203-207 5 p.Research output: Contribution to journal › Letter › Research › peer-review
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Early human dispersals within the Americas
Moreno-Mayar, J. V., Vinner, L., de Barros Damgaard, P., de la Fuente, C., Allentoft, M. E., Vimala, T., Racimo, F., Rasmussen, S., Margaryan, A., Iraeta Orbegozo, M., Mylopotamitaki, D., Alexandersen, V., Primeau, C., Gregersen, K., Hansen, K. L., Lynnerup, N., Kjær, K., Schroeder, H., Malaspinas, A. S., Sikora, M. & 2 others, , 7 Dec 2018, In: Science (New York, N.Y.). 362, 6419, p. 1, 1-11 12 p., eaav2621.Research output: Contribution to journal › Journal article › Research › peer-review
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Genome-wide Ancestry Patterns in Rapanui Suggest Pre-European Admixture with Native Americans
Moreno Mayar, J. Víctor, Rasmussen, Simon, Seguin-Orlando, A., Rasmussen, M., Liang, M., Flåm, S. T., Lie, B. A., Gilfillan, G. D., Nielsen, Rasmus, Thorsby, E., Willerslev, Eske & Malaspinas, A., 2014, In: Current Biology. 24, 21, p. 2518-2525Research output: Contribution to journal › Journal article › Research › peer-review
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Complete mitochondrial genome phylogeographic analysis of killer whales (Orcinus orca) indicates multiple species
Morin, P. A., Archer, F. I., Foote, A. D., Mouatt, J. T. V., Allen, E. E., Wade, P., Durban, J., Parsons, K., Pitman, R., Li, L., Bouffard, P., Nielsen, S. C. A., Rasmussen, M., Willerslev, Eske, Gilbert, M Thomas P & Harkins, T., 1 Jul 2010, In: Genome Research. 20, 7, p. 908-916 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Mitogenomic phylogenetic analyses of the Delphinidae with an emphasis on the Globicephalinae
Mouatt, J. T. V., Ho, S. Y. W., Foote, A. D., Morin, P. A., Kreb, D., Krützen, M., Parra, G. J., Robertson, K. M., de Stephanis, R., Verborgh, P., Willerslev, Eske, Orlando, L. A. A. & Gilbert, M Thomas P, 1 Jan 2011, In: BMC Evolutionary Biology. 11, 10 p., 65.Research output: Contribution to journal › Journal article › Research › peer-review
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Characterizing novel endogenous retroviruses from genetic variation inferred from short sequence reads
Mourier, T., Mollerup, S., Vinner, Lasse, Hansen, T. A., Kjartansdóttir, K. R., Frøslev, Tobias Guldberg, Boutrup, T. S., Nielsen, L. P., Willerslev, Eske & Hansen, Anders Johannes, 2015, In: Scientific Reports. 5, 11 p., 15644 .Research output: Contribution to journal › Journal article › Research › peer-review
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Retrotransposons and non-protein coding RNAs
Mourier, T. & Willerslev, Eske, 2009, In: Briefings in Functional Genomics and Proteomics.Research output: Contribution to journal › Journal article › Research › peer-review
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Large-scale transcriptome data reveals transcriptional activity of fission yeast LTR retrotransposons
Mourier, T. & Willerslev, Eske, 2010, In: BMC Genomics. 11, 12 p., 167.Research output: Contribution to journal › Journal article › Research › peer-review
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Does selection against transcriptional interference shape retroelement-free regions in mammalian genomes?
Mourier, T. & Willerslev, Eske, 2008, In: PLoS ONE. p. e3760Research output: Contribution to journal › Journal article › Research › peer-review
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The Human Genome Project Reveals a Continuous Transfer of Large Mitochondrial Fragments to the Nucleus
Mourier, T., Hansen, A. J., Willerslev, Eske & Arctander, P., 2001, In: Molecular Biology and Evolution. 18, 9, p. 1833-1837Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Transposable elements in cancer as a by-product of stress-induced evolvability
Mourier, T., Nielsen, L. P., Hansen, Anders Johannes & Willerslev, Eske, 2014, In: Frontiers in Genetics. 5, 8 p., 156.Research output: Contribution to journal › Journal article › Research › peer-review
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Statistical guidelines for detecting past population shifts using ancient DNA
Mourier, T., Ho, S. Y. W., Gilbert, M Thomas P, Willerslev, Eske & Orlando, L. A. A., 16 Mar 2012, In: Molecular Biology and Evolution. 29, 9, p. 2241-2251 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Living at the margin of the retreating Fennoscandian Ice Sheet: the early Mesolithic sites at Aareavaara, northernmost Sweden
Möller, P., Östlund, O., Barnekow, L., Sandgren, P., Palmbo, F. & Willerslev, Eske, 13 Jan 2013, In: The Holocene. 23, 1, p. 104-116 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient hepatitis B viruses from the Bronze Age to the Medieval period
Mühlemann, B., Jones, T. C., Damgaard, P. D. B., Allentoft, M. E., Shevnina, I., Logvin, A., Usmanova, E., Panyushkina, I. P., Boldgiv, B., Bazartseren, T., Tashbaeva, K., Merz, V., Lau, N., Smrcka, V., Voyakin, D., Kitov, E., Epimakhov, A., Pokutta, D., Vicze, M., Price, T. D. & 14 others, , 2018, In: Nature. 557, 7705, p. 418-423 6 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Ancient human parvovirus B19 in Eurasia reveals its long-term association with humans
Mühlemann, B., Margaryan, A., Damgaard, P. D. B., Allentoft, M. E., Vinner, L., Hansen, A. J., Weber, A., Bazaliiskii, V. I., Molak, M., Arneborg, J., Bogdanowicz, W., Falys, C., Sablin, M., Smrcka, V., Sten, S., Tashbaeva, K., Lynnerup, N., Sikora, M., Smith, D. J., Fouchier, R. A. M. & 5 others, , 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 29, p. 7557-7562 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Diverse variola virus (smallpox) strains were widespread in northern Europe in the Viking Age
Mühlemann, B., Vinner, L., Margaryan, A., Wilhelmson, H., de la Fuente Castro, C., Allentoft, M. E., de Barros Damgaard, P., Hansen, A. J., Holtsmark Nielsen, S., Strand, L. M., Bill, J., Buzhilova, A., Pushkina, T., Falys, C., Khartanovich, V., Moiseyev, V., Jørkov, M. L. S., Østergaard Sørensen, P., Magnusson, Y., Gustin, I. & 9 others, , 2020, In: Science (New York, N.Y.). 369, 6502, p. 1-12Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Tracing the peopling of the world through genomics
Nielsen, Rasmus, Akey, J. M., Jakobsson, M., Pritchard, J. K., Tishkoff, S. & Willerslev, Eske, 19 Jan 2017, In: Nature. 541, 7637, p. 302-310 9 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Derived immune and ancestral pigmentation alleles in a 7,000-year-old Mesolithic European
Olalde, I., Allentoft, M. E., Sánchez-Quinto, F., Santpere, G., Chiang, C. W. K., DiGeorgio, M., Prado-Martínez, J., Rodríguez Pérez, J. A., Rasmussen, S., Quilez, J., Ramírez, O., Marigorta, U. M., Fernández-Callejo, M., Prada, M. E., Encinas, J. M. V., Nielsen, R., Netea, M. G., Novembre, J., Sturm, R. A., Sabeti, P. & 4 others, , 2014, In: Nature. 507, 7491, p. 225-228 4 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
DNA from keratinous tissue. Part II: feather
Olsen, M. E., Bengtsson, C. F., Bertelsen, Mads Frost, Willerslev, Eske & Gilbert, M Thomas P, 2012, In: Annals of Anatomy. 194, 1, p. 31-35 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient DNA analysis
Orlando, L., Allaby, R., Skoglund, P., Der Sarkissian, C., Stockhammer, P. W., Ávila-Arcos, M. C., Fu, Q., Krause, J., Willerslev, Eske, Stone, A. C. & Warinner, C., 2021, In: Nature Reviews Methods Primers. 1, 14.Research output: Contribution to journal › Review › Research › peer-review
- Published
Evolution: an epigenetic window into the past?
Orlando, L. A. A. & Willerslev, Eske, 2014, In: Science. 345, 6196, p. 511-512 2 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Reconstructing ancient genomes and epigenomes
Orlando, L. A. A., Gilbert, M Thomas P & Willerslev, Eske, 2015, In: Nature Reviews. Genetics. 16, 7, p. 395-408 14 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse
Orlando, L. A. A., Ginolhac, A., Zhang, G., Froese, D., Albrechtsen, A., Stiller, M., Schubert, M., Cappellini, E., Petersen, B., Moltke, I., Johnson, P. L. F., Fumagalli, M., Mouatt, J. T. V., Raghavan, M., Korneliussen, T. S., Malaspinas, A. S., Vogt, J., Szklarczyk, D. M., Kelstrup, C., Vinther, J. & 36 others, , 4 Jul 2013, In: Nature. 499, 7456, p. 74-78 5 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
True single-molecule DNA sequencing of a pleistocene horse bone
Orlando, L. A. A., Ginolhac, A., Raghavan, M., Mouatt, J. T. V., Rasmussen, M., Magnussen, K., Steinmann, K. E., Kapranov, P., Thompson, J. F., Zazula, G., Froese, D., Moltke, Ida, Shapiro, B., Hofreiter, M., Al-Rasheid, K. A. S., Gilbert, M Thomas P & Willerslev, Eske, 2011, In: Genome Research. 21, 10, p. 1705-1719 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Fossil avian eggshell preserves ancient DNA
Oskam, C. L., Haile, James Seymour, McLay, E., Rigby, P., Allentoft, Morten Erik, Olsen, M. E., Bengtsson, C., Miller, G. H., Schwenninger, J., Jacomb, C., Walter, R., Baynes, A., Dortch, J., Parker-Pearson, M., Gilbert, M Thomas P, Holdaway, R. N., Willerslev, Eske & Bunce, M., 7 Jul 2010, In: Royal Society of London. Proceedings B. Biological Sciences. 277, 1690, p. 1991-2000 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Horizontal transfer of short and degraded DNA has evolutionary implications for microbes and eukaryotic sexual reproduction
Overballe-Petersen, S. & Willerslev, Eske, 2014, In: BioEssays. 36, 10, p. 1005-1010 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bacterial natural transformation by highly fragmented and damaged DNA
Overballe-Petersen, S., Harms, K., Orlando, L. A. A., Moreno Mayar, J. Víctor, Rasmussen, Simon, Dahl, Tais Wittchen, Rosing, Minik Thorleif, Poole, A. M., Sicheritz-Ponten, T., Brunak, S., Inselmann, S., de Vries, J., Wackernagel, W., Pybus, O. G., Nielsen, Rasmus, Johnsen, P. J., Nielsen, K. M. & Willerslev, Eske, 3 Dec 2013, In: Proceedings of the National Academy of Sciences of the United States of America. 110, 49, p. 19860–19865 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Next-generation sequencing offers new insights into DNA degradation
Overballe-Petersen, S., Orlando, L. A. A. & Willerslev, Eske, 2012, In: Trends in Biotechnology. 30, 7, p. 364-368 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic analyses inform on migration events during the peopling of Eurasia
Pagani, L., Lawson, D. J., Jagoda, E., Moerseburg, A., Eriksson, A., Mitt, M., Clemente, F., Hudjashov, G., DeGiorgio, M., Saag, L., Wall, J. D., Cardona, A., Maegi, R., Sayres, M. A. W., Kaewert, S., Inchley, C., Scheib, C. L., Jaerve, M., Karmin, M., Jacobs, G. S. & 78 others, , 13 Oct 2016, In: Nature. 538, 7624, p. 238-242 5 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Molecular- and pollen-based vegetation analysis in lake sediments from central Scandinavia
Parducci, L., Matetovici, I., Fontana, S. L., Bennett, K. D., Suyama, Y., Haile, James Seymour, Kjær, Kurt H., Larsen, Nicolaj Krog, Drouzas, A. D. & Willerslev, Eske, 1 Jul 2013, In: Molecular Ecology. 22, 13, p. 3511-3524 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Glacial survival of boreal trees in northern Scandinavia
Parducci, L., Jørgensen, T., Tollefsrud, M. M., Elverland, E., Alm, T., Fontana, S. L., Bennett, K. D., Haile, J. S., Matetovici, I., Suyama, Y., Edwards, M. E., Andersen, K., Rasmussen, M., Boessenkool, S., Coissac, E., Brochmann, C., Taberlet, P., Houmark-Nielsen, M., Larsen, N. K., Orlando, L. A. A. & 4 others, , 2 Mar 2012, In: Science. 335, 6072, p. 1083-1086 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome-wide nucleosome map and cytosine methylation levels of an ancient human genome
Pedersen, J. S., Valen, E., Velazquez, A. M. V., Parker, B. J., Rasmussen, M., Lindgreen, S., Lilje, B., Tobin, D. J., Kelly, T. K., Vang, S., Andersson, R., Jones, P. A., Hoover, C. A., Tikhonov, A., Prokhortchouk, E., Rubin, E. M., Sandelin, A. G., Gilbert, M. T. P., Krogh, A., Willerslev, E. & 1 others, , 2014, In: Genome Research. 24, 3, p. 454-466 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Environmental genomics of Late Pleistocene black bears and giant short-faced bears
Pedersen, Mikkel Winther, De Sanctis, B., Saremi, N. F., Sikora, Martin, Puckett, E. E., Gu, Z., Moon, K. L., Kapp, J. D., Vinner, Lasse, Vardanyan, Z., Ardelean, C. F., Arroyo-Cabrales, J., Cahill, J. A., Heintzman, P. D., Zazula, G., MacPhee, R. D. E., Shapiro, B., Durbin, R. & Willerslev, Eske, 2021, In: Current Biology. 31, 12, p. 2728-2736.e8 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Postglacial viability and colonization in North America’s ice-free corridor
Pedersen, Mikkel Winther, Ruter, Anthony Henry, Schweger, C., Friebe, H., Staff, R. A., Kjeldsen, Kristian Kjellerup, Zepeda Mendoza, M. L., Beaudoin, A. B., Zutter, C., Larsen, Nicolaj Krog, Potter, B. A., Nielsen, Rasmus, Rainville, R. A., Orlando, L. A. A., Meltzer, D. J., Kjær, Kurt H. & Willerslev, Eske, 2016, In: Nature. 537, 7618, p. 45–49 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A comparative study of ancient environmental DNA to pollen and macrofossils from lake sediments reveals taxonomic overlap and additional plant taxa
Pedersen, Mikkel Winther, Ginolhac, A., Orlando, L. A. A., Olsen, J., Andersen, K., Holm, J. M., Funder, Svend Visby, Willerslev, Eske & Kjær, Kurt H., 1 Sep 2013, In: Quaternary Science Reviews. 75, p. 161-168 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient and modern environmental DNA
Pedersen, Mikkel Winther, Overballe-Petersen, S., Ermini, L., Der Sarkissian, C., Haile, James Seymour, Hellström, A. M., Spens, J., Thomsen, P. F., Bohmann, Kristine, Cappellini, Enrico, Schnell, I. B., Wales, N., Carøe, C., Campos, P., Schmidt, A. M. Z., Gilbert, M Thomas P, Hansen, Anders Johannes, Orlando, L. A. A. & Willerslev, Eske, 2015, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 370, 1660, 11 p., 20130383.Research output: Contribution to journal › Review › Research › peer-review
- Published
Human Disease Variation in the Light of Population Genomics
Prohaska, Ana, Racimo, Fernando, Schork, A. J., Sikora, Martin, Stern, A. J., Ilardo, M., Allentoft, Morten Erik, Folkersen, L., Buil, A., Moreno Mayar, J. Víctor, Korneliussen, Thorfinn Sand, Geschwind, D., Ingason, A., Werge, Thomas, Nielsen, Rasmus & Willerslev, Eske, 2019, In: Cell. 177, 1, p. 115-131 17 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Upper palaeolithic Siberian genome reveals dual ancestry of Native Americans
Raghavan, M., Skoglund, P., Graf, K. E., Metspalu, M., Albrechtsen, A., Moltke, I., Rasmussen, S., Stafford jr., T., Orlando, L. A. A., Metspalu, E., Karmin, M., Tambets, K., Rootsi, S., Mägi, R., Campos, P., Balanovska, E., Balanovsky, O., Khusnutdinova, E., Litvinov, S., Osipova, L. P. & 11 others, , 2014, In: Nature. 505, 7481, p. 87-91 4 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
The genetic prehistory of the New World Arctic
Raghavan, M., DeGiorgio, M., Albrechtsen, A., Moltke, I., Skoglund, P., Korneliussen, T. S., Grønnow, B., Appelt, M., Gulløv, H. C., Friesen, T. M., Fitzhugh, W., Malmström, H. S., Rasmussen, S., Olsen, J., Melchior, L. C., Fuller, B. T., Fahrni, S. M., Stafford jr., T., Grimes, V., Renouf, M. A. P. & 36 others, , 2014, In: Science. 345, 6200, 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic evidence for the Pleistocene and recent population history of Native Americans
Raghavan, M., Steinrücken, M., Harris, K., Schiffels, S., Rasmussen, S., DeGiorgio, M., Albrechtsen, A., Valdiosera Morales, C. E., Avila Arcos, M. D. C., Malaspinas, A. S., Eriksson, A., Moltke, I., Metspalu, M., Homburger, J. R., Wall, J., Cornejo, O. E., Moreno Mayar, J. V., Korneliussen, T. S., Pierre, T. L., Rasmussen, M. & 81 others, , 2015, In: Science (New York, N.Y.). 349, 6250, 6250.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomes of Pleistocene Siberian Wolves Uncover Multiple Extinct Wolf Lineages
Ramos-Madrigal, J., Sinding, M-H. S., Carøe, C., Mak, S. S. T., Niemann, J., Samaniego Castruita, J. A., Fedorov, S., Kandyba, A., Germonpré, M., Bocherens, H., Feuerborn, T. R., Pitulko, V. V., Pavlova, E. Y., Nikolskiy, P. A., Kasparov, A. K., Ivanova, V. V., Larson, G., Frantz, L. A. F., Willerslev, E., Meldgaard, M. & 7 others, , 2020, In: Current biology : CB. 31, p. 198-206Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Emergence and Spread of Basal Lineages of Yersinia pestis during the Neolithic Decline
Rascovan, N., Sjogren, K., Kristiansen, K., Nielsen, Rasmus, Willerslev, Eske, Desnues, C. & Rasmussen, Simon, 2019, In: Cell. 176, 1-2, p. 295-305.e10Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Response to Comment by Goldberg et al. on "DNA from Pre-Clovis Human Coprolites in Oregon, North America"
Rasmussen, M., Cummings, L. S., Gilbert, M Thomas P, Bryant, V., Smith, C., Jenkins, D. L., Willerslev, Eske & Rasmussen, M., 1 Jul 2009, In: Science. 325, 5937, p. 148-148 1 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Response to Comment by Goldberg et al. on "DNA from Pre-Clovis Human Coprolites in Oregon, North America"
Rasmussen, M., Cummings, L., Gilbert, M Thomas P, Bryant, V., Smith, C., Jenkins, D. & Willerslev, Eske, 2009, In: Science. 325, p. 148 1 p.Research output: Contribution to journal › Comment/debate › Research
- Published
Ancient human genome sequence of an extinct Palaeo-Eskimo
Rasmussen, M., Li, Y., Lindgreen, S., Pedersen, J. S., Albrechtsen, A., Moltke, I., Metspalu, M., Metspalu, E., Kivisild, T., Gupta, R., Bertalan, M., Nielsen, K., Gilbert, T., Wang, Y., Raghavan, M., Campos, P., Kamp, H. L. M., Wilson, A. S., Gledhill, A., Tridico, S. & 32 others, , 11 Feb 2010, In: Nature. 463, 7282, p. 757-762 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The ancestry and affiliations of Kennewick Man
Rasmussen, M., Sikora, Martin, Albrechtsen, Anders, Korneliussen, Thorfinn Sand, Moreno Mayar, J. Víctor, Poznik, G. D., Zollikofer, C. P. E., Ponce de León, M. S., Allentoft, Morten Erik, Moltke, Ida, Jónsson, H., Valdiosera Morales, C. E., Malhi, R. S., Orlando, L. A. A., Bustamante, C. D., Stafford jr., T., Meltzer, D. J., Nielsen, Rasmus & Willerslev, Eske, 2015, In: Nature. 523, 7561, p. 455-458 4 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
The genome of a Late Pleistocene human from a Clovis burial site in western Montana
Rasmussen, M., Anzick, S. L., Waters, M. R., Skoglund, P., DeGiorgio, M., Stafford jr., T., Rasmussen, S., Moltke, I., Albrechtsen, A., Doyle, S. M., Poznik, G. D., Gudmundsdottir, V., Yadav, R., Malaspinas, A. S., White, S. S., Allentoft, M. E., Cornejo, O. E., Tambets, K., Eriksson, A., Heintzman, P. D. & 22 others, , 2014, In: Nature. 506, 7487, p. 225-229 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An Aboriginal Australian genome reveals separate human dispersals into Asia
Rasmussen, M., Guo, X., Wang, Y., Lohmueller, K. E., Rasmussen, S., Albrechtsen, A., Skotte, L., Lindgreen, S., Metspalu, M., Jombart, T., Kivisild, T., Zhai, W., Eriksson, A., Manica, A., Orlando, L., De La Vega, F. M., Tridico, S., Metspalu, E., Nielsen, K., Avila Arcos, M. D. C. & 38 others, , 2011, In: Science. 334, 6052, p. 94-98 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Early divergent strains of Yersinia pestis in Eurasia 5,000 years ago
Rasmussen, S., Allentoft, M. E., Nielsen, K., Orlando, L. A. A., Sikora, M., Sjögren, K-G., Pedersen, A. G., Schubert, M., Van Dam, A., Kapel, C. M. O., Nielsen, H. B., Brunak, S., Avetisyan, P., Epimakhov, A., Khalyapin, M. V., Gnuni, A., Kriiska, A., Lasak, I., Metspalu, M., Moiseyev, V. & 11 others, , 2015, In: Cell. 163, 3, p. 571-582 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
gargammel: a sequence simulator for ancient DNA
Renaud, Gabriel, Hanghøj, Kristian Ebbesen, Willerslev, Eske & Orlando, L. A. A., 2017, In: Bioinformatics. 33, 4, p. 577-579 3 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Joint Estimates of Heterozygosity and Runs of Homozygosity for Modern and Ancient Samples
Renaud, Gabriel, Hanghøj, Kristian Ebbesen, Korneliussen, Thorfinn Sand, Willerslev, Eske & Orlando, L., 2019, In: Genetics (Print). 212, 3, p. 587-614 28 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Late Pleistocene paleoecology and phylogeography of woolly rhinoceroses
Rey de la Iglesia, Alba, Lister, A. M., Stuart, A. J., Bocherens, H., Szpak, P., Willerslev, Eske & Lorenzen, Eline, 2021, In: Quaternary Science Reviews. 263, 13 p., 106993.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multi-proxy analyses of a mid-15th century Middle Iron Age Bantu-speaker palaeo-faecal specimen elucidates the configuration of the 'ancestral' sub-Saharan African intestinal microbiome
Rifkin, R. F., Vikram, S., Ramond, J. B., Rey de la Iglesia, Alba, Brand, T. B., Porraz, G., Val, A., Hall, G., Woodborne, S., Le Bailly, M., Potgieter, M., Underdown, S. J., Koopman, J. E., Cowan, D. A., Van De Peer, Y., Willerslev, Eske & Hansen, Anders Johannes, 6 May 2020, In: Microbiome. 8, 1, 62.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Sequences of microvariant/“off-ladder” STR alleles
Rockenbauer, Eszter, Holgersson, M., Fordyce, S. L., Avila Arcos, M. D. C., Børsting, Claus, Hansen, Anders Johannes, Frank-Hansen, R., Willerslev, Eske, Gilbert, M Thomas P & Morling, Niels, 2011, In: Forensic Science International: Genetics Supplement Series. 3, 1, p. e204-e205 2 p.Research output: Contribution to journal › Conference article › Research › peer-review
- Published
The origin and evolution of maize in the Southwestern United States: [+ erratum]
Rodrigues da Fonseca, Rute Andreia, Smith, B. D., Wales, N., Cappellini, Enrico, Skoglund, P., Fumagalli, M., Samaniego Castruita, J. A., Carøe, C., Avila Arcos, M. D. C., Hufnagel, D. E., Korneliussen, Thorfinn Sand, Vieira, Filipe Garrett, Jakobsson, M., Arriaza, B., Willerslev, Eske, Nielsen, Rasmus, Hufford, M. B., Albrechtsen, Anders, Ross-Ibarra, J. & Gilbert, M Thomas P, 2015, In: Nature Plants. 1, 5 p., 14003.Research output: Contribution to journal › Letter › Research › peer-review
- Published
50,000 years of genetic uniformity in the critically endangered Iberian lynx
Rodríguez, R., Ramírez, O., Valdiosera Morales, C. E., Garcia, N., Alda, F., Madurell-Malapeira, J., Marmi, J., Doadrio, I., Willerslev, Eske, Götherstrom, A., Luis Arsuaga, J., Thomas, M. G., Lalueza-Fox, C. & Dalén, L., Sep 2011, In: Molecular Ecology. 20, 18, p. 3785-3795 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
mtDNA analysis of human remains from an early Danish Christian cemetery
Rudbeck, L., Gilbert, M Thomas P, Willerslev, Eske, Hansen, Anders Johannes, Lynnerup, Niels, Christensen, T. & Dissing, J., 2005, In: American Journal of Physical Anthropology. 128, 2, p. 424-9 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Nuclear Gene Indicates Coat-Color Polymorphism in Mammoths
Römpler, H., Rohland, N., Lalueza-Fox, C., Willerslev, Eske, Kuznetsova, T., Rabeder, G., Bertranpetit, J., Schöneberg, T. & Hofreiter, M., 2006, In: Science. 313, 5783, p. 62Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Extensive farming in Estonia started through a sex-biased migration from the steppe
Saag, L., Varul, L., Scheib, C. L., Stenderup, Jesper Tandberg, Allentoft, Morten Erik, Saag, L., Pagani, L., Reidla, M., Tambets, K., Metspalu, E., Kriiska, A., Willerslev, Eske, Kivisild, T. & Metspalu, M., 24 Jul 2017, In: Current Biology. 27, 14, p. 2185-2193 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Tracking the origins of Yakutian horses and the genetic basis for their fast adaptation to subarctic environments
Sanz, P. L., Der Sarkissian, C., Ermini, L., Schubert, M., Jónsson, H., Albrechtsen, A., Fumagalli, M., Yang, M. A., Gamba, C., Seguin-Orlando, A., Mortensen, C. D., Petersen, B., Hoover, C. A., Lorente-Galdos, B., Nedoluzhko, A., Boulygina, E., Tsygankova, S., Neuditschko, M., Jagannathan, V., Theves, C. & 20 others, , 2015, In: Proceedings of the National Academy of Sciences of the United States of America. 112, 50, p. E6889-E6897 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient genomic changes associated with domestication of the horse
Sanz, P. L., Gamba, C., Gaunitz, C., Der Sarkissian, C., Pruvost, M., Albrechtsen, A., Fages, A. A., Khan, N., Schubert, M., Jagannathan, V., Serres-Armero, A., Kuderna, L. F. K., Povolotskaya, I. S., Seguin-Orlando, A., Lepetz, S., Neuditschko, M., Thèves, C., Alquraishi, S., Alfarhan, A. H., AL-Rasheid, K. & 13 others, , 28 Apr 2017, In: Science. 356, 6336, p. 442-445 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Screening mammal biodiversity using DNA from leeches
Schnell, I. B., Thomsen, P. F., Wilkinson, N., Rasmussen, M., Jensen, L. R. D., Willerslev, Eske, Bertelsen, Mads Frost & Gilbert, M Thomas P, 2012, In: Current Biology. 22, 8, p. R262-R263 2 p.Research output: Contribution to journal › Letter › Research › peer-review
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Characterisation of insect and plant origins using DNA extracted from small volumes of bee honey
Schnell, I. B., Fraser, M., Willerslev, Eske & Gilbert, M Thomas P, 2010, In: Arthropod - Plant Interactions. 4, 2, p. 107-116 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Unraveling ancestry, kinship, and violence in a Late Neolithic mass grave
Schroeder, H., Margaryan, A., Szmyt, M., Theulot, B., Włodarczak, P., Rasmussen, S., Gopalakrishnan, S., Szczepanek, A., Konopka, T., Jensen, T. Z. T., Witkowska, B., Wilk, S., Przybyła, M. M., Pospieszny, Ł., Sjögren, K-G., Belka, Z., Olsen, J., Kristiansen, K., Willerslev, E., Frei, K. M. & 3 others, , 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 22, p. 10705-10710Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome-wide ancestry of 17th-century enslaved Africans from the Caribbean
Schroeder, Hannes, Avila Arcos, M. D. C., Malaspinas, A. S., Poznik, G. D., Sandoval-Velasco, Marcela, Carpenter, M. L., Moreno Mayar, J. Víctor, Sikora, Martin, Johnson, P. L. F., Allentoft, Morten Erik, Samaniego Castruita, J. A., Haviser, J. B., Dee, M. W., Stafford, T. W., Salas, A., Orlando, L. A. A., Willerslev, Eske, Bustamente, C. D. & Gilbert, M Thomas P, 2015, In: Proceedings of the National Academy of Sciences USA (PNAS). 112, 12, p. 3669–3673 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Origins and genetic legacies of the Caribbean Taino
Schroeder, H., Sikora, M., Gopalakrishnan, S., Cassidy, L. M., Delserc, P. M., Velasco, M. S., Schraiber, J. G., Rasmussen, S., Homburger, J. R., Avila-Arcos, M. C., Allentoft, M. E., Moreno Mayar, J. V., Renaud, G., Gomez-Carballa, A., Laffoon, J. E., Hopkins, R. J. A., Higham, T. F. G., Carr, R. S., Schaffer, W. C., Day, J. S. & 7 others, , 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 10, p. 2341-2346 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Characterization of ancient and modern genomes by SNP detection and phylogenomic and metagenomic analysis using PALEOMIX
Schubert, Mikkel, Ermini, L., Der Sarkissian, C., Jónsson, H., Ginolhac, A., Schaefer, R., Martin, M. D., Fernandez Garcia, R., Kircher, M., McCue, M., Willerslev, Eske & Orlando, L. A. A., 2014, In: Nature Protocols. 9, 5, p. 1056-82 27 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Prehistoric genomes reveal the genetic foundation and cost of horse domestication
Schubert, M., Jónsson, H., Chang, D., Der Sarkissian, C., Ermini, L., Ginolhac, A., Albrechtsen, A., Dupanloup, I., Foucal, A., Petersen, B., Fumagalli, M., Raghavan, M., Seguin-Orlando, A., Korneliussen, T. S., Velazquez, A. M. V., Stenderup, J., Hoover, C. A., Rubin, C-J., Alfarhan, A. H., Alquraishi, S. A. & 15 others, , 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 52, p. E5661–E5669 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Improving ancient DNA read mapping against modern reference genomes
Schubert, Mikkel, Ginolhac, A., Lindgreen, S., Thompson, J. F., Al-Rasheid, K. A. S., Willerslev, Eske, Krogh, Anders & Orlando, L. A. A., 2012, In: BMC Genomics. 13, 15 p., 178.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient biomolecules reveal ancestry, diet and microbiomes of Upper Palaeolithic hunter-gatherers from Sicily
Scorrano, Gabriele, Nielsen, S. H., Lo Vetro, D., Mackie, Meaghan, Fabbri, P. F., Allentoft, Morten Erik, Martini, F., Martanez-Labarga, C., Rickards, O., Olsen, Jesper Velgaard, Willerslev, Eske, Cappellini, Enrico & Sikora, Martin, 2020, p. 255-255.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
- Published
DNA evidence of bowhead whale exploitation by Greenlandic Paleo-Inuit 4,000 years ago
Seersholm, Frederik Valeur, Pedersen, Mikkel Winther, Søe, M. J., Shokry, H., Mak, Sarah Siu Tze, Ruter, Anthony Henry, Raghavan, M., Fitzhugh, W., Kjær, Kurt H., Willerslev, Eske, Meldgaard, Morten, Kapel, Christian & Hansen, Anders Johannes, 2016, In: Nature Communications. 7, 9 p., 13389.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient DNA reveals multiple origins and migration waves of extinct Japanese brown bear lineages
Segawa, T., Yonezawa, T., Mori, H., Akiyoshi, A., Allentoft, Morten Erik, Kohno, A., Tokanai, F., Willerslev, Eske, Kohno, N. & Nishihara, H., 2021, In: Royal Society Open Science. 8, 8, 15 p., 210518.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Demographic analysis of cyanobacteria based on the mutation rates estimated from an ancient ice core
Segawa, T., Takeuchi, N., Fujita, K., Aizen, V. B., Willerslev, Eske & Yonezawa, T., 2018, In: Heredity. 120, p. 562-573 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Ligation bias in Illumina next-generation DNA libraries: implications for sequencing ancient genomes
Seguin-Orlando, A., Schubert, Mikkel, Clary, J., Stagegaard, J., Alberdi, M. T., Prado, J. L., Prieto, A., Willerslev, Eske & Orlando, L. A. A., 29 Oct 2013, In: PLoS ONE. 8, 10, 11 p., e78575.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic structure in Europeans dating back at least 36,200 years
Seguin-Orlando, A., Korneliussen, T. S., Sikora, M., Malaspinas, A. S., Manica, A., Moltke, I., Albrechtsen, A., Ko, A., Margaryan, A., Moiseyev, V., Goebel, T., Westaway, M., Lambert, D., Khartanovich, V., Wall, J. D., Nigst, P. R., Foley, R. A., Lahr, M. M., Nielsen, R., Orlando, L. A. A. & 1 others, , 2014, In: Science. 346, 6213, p. 1113-1118 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Pros and cons of methylation-based enrichment methods for ancient DNA
Seguin-Orlando, A., Gamba, C., Der Sarkissian, C., Ermini, L., Louvel, G., Boulygina, E., Sokolov, A., Nedoluzhko, A., Lorenzen, E., Lopez, P., McDonald, H. G., Scott, E., Tikhonov, A., Stafford jr., T., Alfarhan, A. H., Alquraishi, S. A., Al-Rasheid, K. A. S., Shapiro, B., Willerslev, E., Prokhortchouk, E. & 1 others, , 2015, In: Scientific Reports. 5, 15 p., 11826.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Amplification of TruSeq ancient DNA libraries with AccuPrime Pfx: consequences on nucleotide misincorporation and methylation patterns
Seguin-Orlando, A., Hoover, C. A., Vasiliev, S. K., Ovodov, N. D., Shapiro, B., Cooper, A., Rubin, E. M., Willerslev, Eske & Orlando, L., 31 Mar 2015, In: Science and Technology of Archaeological Research. 1, 1, p. 1-9 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Detecting Schistosoma mansoni transmission using environmental DNA in water samples
Sengupta, Mita Eva, Hellstrom, A. M., Kariuki, H. C., Olsen, A., Mejer, Helena, Willerslev, Eske, Kristensen, T. K. & Vennervald, Birgitte J, Oct 2017, In: Tropical Medicine & International Health. 22, Suppl. 1, p. 7-8 1S3.5.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Environmental DNA for improved detection and environmental surveillance of schistosomiasis
Sengupta, Mita Eva, Hellstrom, M., Kariuki, H. C., Olsen, A., Thomsen, P. F., Mejer, Helena, Willerslev, Eske, Mwanje, M. T., Madsen, Henry, Kristensen, T. K., Stensgaard, Anna-Sofie & Vennervald, Birgitte J, 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 18, p. 8931-8940Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rise and fall of the Beringian steppe bison
Shapiro, B., Drummond, A. J., Rambaut, A., Wilson, M. C., Matheus, P. E., Sher, A. V., Pybus, O. G., Gilbert, M. T. P., Barnes, I., Binladen, J., Willerslev, E., Hansen, A. J., Baryshnikov, G. F., Burns, J. A., Davydov, S., Driver, J. C., Froese, D. G., Harington, C. R., Keddie, G., Kosintsev, P. & 7 others, , 2004, In: Science. 306, 5701, p. 1561-5Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic diversity and evolution of the head crest in the rock pigeon
Shapiro, M. D., Kronenberg, Z., Li, C., Domyan, E. T., Pan, H., Campbell, M., Tan, H., Huff, C. D., Hu, H., Vickrey, A. I., Nielsen, S. C. A., Stringham, S. A., Hu, H., Willerslev, Eske, Gilbert, M Thomas P, Yandell, M., Zhang, G. & Wang, J., 1 Mar 2013, In: Science. 339, 6123, p. 1063-1067 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Population characteristics of a large whale shark aggregation inferred from seawater environmental DNA
Sigsgaard, E. E., Nielsen, Ida Broman, Bach, S. S., Lorenzen, Eline, Robinson, D. P., Knudsen, Steen Wilhelm, Pedersen, Mikkel Winther, Al Jaidah, M., Orlando, L. A. A., Willerslev, Eske, Møller, Peter Rask & Thomsen, P. F., 21 Nov 2016, In: Nature Ecology & Evolution. 1, 1, 4 p., 0004.Research output: Contribution to journal › Letter › Research › peer-review
- Published
The population history of northeastern Siberia since the Pleistocene
Sikora, M., Pitulko, V. V., Sousa, V. C., Allentoft, M. E., Vinner, L., Rasmussen, S., Margaryan, A., Damgaard, P. D. B., de la Fuente Castro, C., Renaud, G., Yang, M. A., Fu, Q., Dupanloup, I., Giampoudakis, K., Nogues, D. B., Rahbek, C., Kroonen, G., Peyrot, M., McColl, H., Vasilyev, S. V. & 27 others, , 2019, In: Nature. 570, p. 182–188Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient genomes show social and reproductive behavior of early Upper Paleolithic foragers
Sikora, M., Seguin-Orlando, A., Sousa, V. C., Albrechtsen, A., Korneliussen, T. S., Ko, A., Rasmussen, S., Dupanloup, I., Nigst, P. R., Bosch, M. D., Renaud, G., Allentoft, M. E., Margaryan, A., Vasilyev, S. V., Veselovskaya, E. V., Borutskaya, S. B., Deviese, T., Comeskey, D., Higham, T., Manica, A. & 7 others, , 3 Nov 2017, In: Science. 358, 6363, p. 659-662 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Arctic-adapted dogs emerged at the Pleistocene-Holocene transition
Sinding, M. H. S., Gopalakrishnan, S., Ramos-Madrigal, J., de Manuel, M., Pitulko, V. V., Kuderna, L., Feuerborn, T. R., Frantz, L. A. F., Vieira, F. G., Niemann, J., Samaniego Castruita, J. A., Carøe, C., Andersen-Ranberg, E. U., Jordan, P. D., Pavlova, E. Y., Nikolskiy, P. A., Kasparov, A. K., Ivanova, V. V., Willerslev, E., Skoglund, P. & 15 others, , 2020, In: Science (New York, N.Y.). 368, 6498, p. 1495-1499 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Origins and genetic legacy of Neolithic farmers and hunter-gatherers in Europe
Skoglund, P., Malmström, H., Raghavan, M., Storå, J., Hall, P., Willerslev, Eske, Gilbert, M Thomas P, Götherström, A. & Jakobsson, M., 2012, In: Science. 336, 6080, p. 466-469 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic diversity and admixture differs for Stone-Age Scandinavian foragers and farmers
Skoglund, P., Malmström, H., Omrak, A., Raghavan, M., Valdiosera, C., Günther, T., Hall, P., Tambets, K., Parik, J., Sjögren, K., Apel, J., Willerslev, Eske, Storå, J., Götherström, A. & Jakobsson, M., 2014, In: Science. 344, 6185, p. 747-750 4 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
On the phylogeny of the metazoa in the light of Cycliophora and Micrognathozoa
Sorensen, M. V., Funch, P., Willerslev, Eske, Hansen, Anders Johannes & Olesen, Jørgen, 2000, In: Zoologischer Anzeiger. 239, 3-4Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Imputation of ancient human genomes
Sousa da Mota, B., Rubinacci, S., Dávalos, D. I. C., Amorim, C. E. G., Sikora, Martin, Johannsen, N. N., Szmyt, M. H., Włodarczak, P., Szczepanek, A., Przybyła, M. M., Schroeder, Hannes, Allentoft, Morten Erik, Willerslev, Eske, Malaspinas, A. & Delaneau, O., 2023, In: Nature Communications. 14, 17 p., 3660.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interordinal gene capture, the phylogenetic position of Steller's sea cow based on molecular and morphological data, and the macroevolutionary history of Sirenia
Springer, M. S., Signore, A. V., Paijmans, J. L. A., Vélez-Juarbe, J., Domning, D. P., Bauer, C. E., He, K., Crerar, L., Campos, P., Murphy, W. J., Meredith, R. W., Gatesy, J., Willerslev, Eske, MacPhee, R. D. E., Hofreiter, M. & Campbell, K. L., 2015, In: Molecular Phylogenetics and Evolution. 91, p. 178-193 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Radiation of extant Cetaceans Driven by Restructuring of the Oceans
Steeman, M. E., Hebsgaard, M. B., Fordyce, J., Syw, H., Rabovsky, D., Nielsen, Rasmus, Rahbek, Carsten, Glenner, Henrik, Sørensen, Martin Vinther & Willerslev, Eske, 2009, In: Systematic Biology. 58, p. 573-585 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient DNA from latrines in Northern Europe and the Middle East (500 BC–1700 AD) reveals past parasites and diet
Søe, M. J., Nejsum, P., Seersholm, Frederik Valeur, Fredensborg, Brian Lund, Habraken, R., Haase, K., Hald, M. M., Simonsen, R., Højlund, F., Blanke, L., Merkyte, Inga, Willerslev, Eske & Kapel, Christian, 2018, In: PLOS ONE. 13, 4, 17 p., e0195481.Research output: Contribution to journal › Journal article › Research › peer-review
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Reconstructing genome evolution in historic samples of the Irish potato famine pathogen
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Deep sequencing of RNA from ancient maize kernels
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True single-molecule DNA sequencing of a pleistocene horse bone
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