Rute Andreia Rodrigues da Fonseca
Associate Professor
Section for Biodiversity
Universitetsparken 15, København Ø
Section for Biodiversity
Universitetsparken 15, 2100 København Ø
- Published
Comparative analysis of complete mitochondrial genomes suggests that relaxed purifying selection is driving high nonsynonymous evolutionary rate of the NADH2 gene in whitefish (Coregonus ssp.)
Jacobsen, M. W., Rodrigues da Fonseca, Rute Andreia, Bernatchez, L. & Hansen, M. M., 2016, In: Molecular Phylogenetics and Evolution. 95, p. 161-170 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Combined transcriptomic and proteomic analysis of the posterior salivary gland from the southern blue-ringed octopus and the southern sand octopus
Whitelaw, B. L., Strugnell, J. M., Faou, P., Rodrigues da Fonseca, Rute Andreia, Hall, N. E., Norman, M., Finn, J. & Cooke, I. R., 2016, In: Journal of Proteome Research. 15, 9, p. 3284-3297 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
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Cephalopods in neuroscience: regulations, research and the 3Rs
Fiorito, G., Affuso, A., Anderson, D. B., Basil, J., Bonnaud, L., Botta, G., Cole, A., D'Angelo, L., De Girolamo, P., Dennison, N., Dickel, L., Di Cosmo, A., Di Cristo, C., Gestal, C., Rodrigues da Fonseca, R. A., Grasso, F., Kristiansen, T., Kuba, M., Maffucci, F., Manciocco, A. & 15 others, , 2014, In: Invertebrate Neuroscience. 14, 1, p. 13-36 24 p.Research output: Contribution to journal › Review › Research › peer-review
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Cephalopod genomics: a plan of strategies and organization
Albertin, C. B., Bonnaud, L., Brown, C. T., Crookes-Goodson, W. J., Rodrigues da Fonseca, R. A., Di Cristo, C., Dilkes, B. P., Edsinger-Gonzales, E., Freeman, Jr., R. M., Hanlon, R. T., Koenig, K. M., Lindgren, A. R., Martindale, M. Q., Minx, P., Moroz, L. L., Nödl, M-T., Nyholm, S. V., Ogura, A., Pungor, J. R., Rosenthal, J. J. C. & 6 others, , 2012, In: Standards in Genomic Sciences. 7, p. 175-188 14 p., 1.Research output: Contribution to journal › Journal article › Research › peer-review
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Cartilaginous fishes offer unique insights into the evolution of the nuclear receptor gene repertoire in gnathostomes
Fonseca, E., Machado, A. M., Vilas-Arrondo, N., Gomes-dos-Santos, A., Verissimo, A., Esteves, P., Almeida, T., Themudo, G., Ruivo, R., Perez, M., Rodrigues da Fonseca, Rute Andreia, Santos, M. M., Froufe, E., Roman-Marcote, E., Venkatesh, B. & Castro, L. F. C., 2020, In: General and Comparative Endocrinology. 295, 10 p., 113527.Research output: Contribution to journal › Journal article › Research › peer-review
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Ancient genomics
Der Sarkissian, C., Allentoft, M. E., Avila Arcos, M. D. C., Barnett, R., Campos, P. F., Cappellini, E., Ermini, L., Fernandez Garcia, R., Rodrigues da Fonseca, R. A., Ginolhac, A., Hansen, A. J., Jónsson, H., Korneliussen, T. S., Margaryan, A., Martin, M. D., Moreno Mayar, J. V., Raghavan, M., Rasmussen, M., Sandoval Velasco, M., Schroeder, H. & 6 others, , 2015, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 370, 1660, 12 p., 20130387.Research output: Contribution to journal › Review › Research › peer-review
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Adaptive venom evolution and toxicity in octopods is driven by extensive novel gene formation, expansion, and loss
Whitelaw, B. L., Cooke, I. R., Finn, J., Rodrigues da Fonseca, Rute Andreia, Ritschard, E. A., Gilbert, M Thomas P, Simakov, O. & Strugnell, J. M., 2020, In: GigaScience. 9, 11, 15 p., giaa120.Research output: Contribution to journal › Journal article › Research › peer-review
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A resource for sustainable management: De novo assembly and annotation of the liver transcriptome of the Atlantic chub mackerel, Scomber colias
Machado, A. M., Felício, M., Fonseca, E., Rodrigues da Fonseca, Rute Andreia & Castro, L. F. C., 2018, In: Data in Brief. 18, p. 276-284 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
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A refined model of the genomic basis for phenotypic variation in vertebrate hemostasis
Ribeiro, Â. M., Zepeda Mendoza, M. L., Bertelsen, Mads Frost, Kristensen, Annemarie T., Jarvis, E. D., Gilbert, M Thomas P & Rodrigues da Fonseca, Rute Andreia, 2015, In: B M C Evolutionary Biology. 15, 8 p., 124.Research output: Contribution to journal › Journal article › Research › peer-review
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A draft genome sequence of the elusive giant squid, Architeuthis dux
da Fonseca, R. R., Couto, A., Machado, A. M., Brejova, B., Albertin, C. B., Silva, F., Gardner, P., Baril, T., Hayward, A., Campos, A., Ribeiro, Â. M., Barrio-Hernandez, I., Hoving, H-J., Tafur-Jimenez, R., Chu, C., Frazão, B., Petersen, B., Peñaloza, F., Musacchia, F., Alexander, G. C. & 24 others, , 2020, In: GigaScience. 9, 1, 12 p., giz152.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 33270633
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3000
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DivA: detection of non-homologous and very divergent regions in protein sequence alignments
Research output: Contribution to journal › Journal article › Research › peer-review
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1039
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The elusive nature of adaptive mitochondrial DNA evolution of an Arctic lineage prone to frequent introgression
Research output: Contribution to journal › Journal article › Research › peer-review
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1003
downloads
Ancient genomics
Research output: Contribution to journal › Review › Research › peer-review
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