Kristine Bohmann
Associate Professor
Section for Molecular Ecology and Evolution
Øster Farimagsgade 5, Building: 7
1353 København K
Member of:
- 2024
- Published
Analysing the effects of distance, taxon and biomass on vertebrate detections using bulk-collected carrion fly iDNA
Fernandes, Kristen Marie Rose, Bateman, P. W., Saunders, B. J., Gibberd, M., Bunce, M., Bohmann, Kristine & Nevill, P., 2024, In: Royal Society Open Science. 11, 4, 15 p., 231286.Research output: Contribution to journal › Journal article › Research › peer-review
- 2023
- Published
Transforming terrestrial biodiversity surveys using airborne eDNA
Bohmann, Kristine & Lynggaard, Christina Islas, 2023, In: Trends in Ecology and Evolution. 38, 2, p. 119-121 3 p.Research output: Contribution to journal › Letter › Research › peer-review
- Published
Use of carrion fly iDNA metabarcoding to monitor invasive and native mammals
Fernandes, Kristen Marie Rose, Bateman, P. W., Saunders, B. J., Bunce, M., Bohmann, Kristine & Nevill, P., 2023, In: Conservation Biology. 37, 5, 12 p., e14098.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Perspectives and Future Developments Within Sedimentary DNA Research
Holman, Luke Earl, Wang, Yi, Sawafuji, Rikai, Epp, L. S., Bohmann, Kristine & Pedersen, Mikkel Winther, 2023, Tracking Environmental Change Using Lake Sediments: Sedimentary DNA. Capo, E., Barouillet, C. & Smol, J. P. (eds.). Springer, Vol. 6. p. 393-416 (Developments in Paleoenvironmental Research, Vol. 21).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
- Published
Airborne environmental DNA captures terrestrial vertebrate diversity in nature
Lynggaard, Christina Islas, Frøslev, Tobias Guldberg, Johnson, Matthew Stanley, Olsen, Morten Tange & Bohmann, Kristine, 27 Jul 2023, In: Molecular Ecology Resources. 24, 1, 20 p., e13840.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Vertebrate environmental DNA from leaf swabs
Lynggaard, Christina Islas, Calvignac-Spencer, S., Chapman, C. A., Kalbitzer, U., Leendertz, F. H., Omeja, P. A., Opito, E. A., Sarkar, D., Bohmann, Kristine & Gogarten, J. F., 2023, In: Current Biology. 33, 16, p. R853-R854Research output: Contribution to journal › Comment/debate › Research › peer-review
- 2022
- Published
Toward global integration of biodiversity big data: a harmonized metabarcode data generation module for terrestrial arthropods
Arribas, P., Andújar, C., Bohmann, Kristine, deWaard, J. R., Economo, E. P., Elbrecht, V., Geisen, S., Goberna, M., Krehenwinkel, H., Novotny, V., Zinger, L., Creedy, T. J., Meramveliotakis, E., Noguerales, V., Overcast, I., Morlon, H., Papadopoulou, A., Vogler, A. P. & Emerson, B. C., 2022, In: GigaScience. 11, 12 p., giac065.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Strategies for sample labelling and library preparation in DNA metabarcoding studies
Bohmann, Kristine, Elbrecht, V., Carøe, C., Bista, I., Leese, F., Bunce, M., Yu, D. W., Seymour, M., Dumbrell, A. J. & Creer, S., 2022, In: Molecular Ecology Resources. 22, 4, p. 1231-1246 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A two-step metagenomics approach for the identification and mitochondrial DNA contig assembly of vertebrate prey from the blood meals of common vampire bats (Desmodus rotundus)
Chua, Physilia, Carøe, C., Crampton-Platt, A., Reyes-Avila, C. S., Jones, G., Streicker, D. G. & Bohmann, Kristine, 2022, In: Metabarcoding and Metagenomics. 6, p. 75-87 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
- Published
Airborne environmental DNA for terrestrial vertebrate community monitoring
Lynggaard, Christina Islas, Bertelsen, Mads Frost, Jensen, Casper Vindahl, Johnson, Matthew Stanley, Frøslev, Tobias Guldberg, Olsen, Morten Tange & Bohmann, Kristine, 2022, In: Current Biology. 32, 3, p. 701-707.e5 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Shunning the scoop: Sidestepping the race to publish
Lynggaard, Christina Islas, Littlefair, J. E., Bohmann, Kristine & Clare, E. L., 2022, In: iScience. 25, 4, 8 p., 104080.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
The potential of aquatic bloodfeeding and nonbloodfeeding leeches as a tool for iDNA characterisation
Lynggaard, Christina Islas, Oceguera-Figueroa, A., Kvist, S., Gilbert, M Thomas P & Bohmann, Kristine, 2022, In: Molecular Ecology Resources. 22, 2, p. 539-553 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2021
- Published
Connecting high-throughput biodiversity inventories: Opportunities for a site-based genomic framework for global integration and synthesis
Arribas, P., Andujar, C., Bidartondo, M. I., Bohmann, K., Coissac, E., Creer, S., deWaard, J. R., Elbrecht, V., Ficetola, G. F., Goberna, M., Kennedy, S., Krehenwinkel, H., Leese, F., Novotny, V., Ronquist, F., Yu, D. W., Zinger, L., Creedy, T. J., Meramveliotakis, E., Noguerales, V. & 5 others, , 2021, In: Molecular Ecology. 30, 5, p. 1120-1135 16 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
DNAqua-Net conference unites participants from around the world with the quest to standardize and implement DNA-based aquatic biomonitoring
Bohmann, Kristine, Chua, Physilia, Holman, L. E. & Lynggaard, Christina Islas, 2021, In: Environmental DNA. 3, 5, p. 884-888 5 p.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Labelling strategies in metabarcoding studies & how to ensure that nucleotide tags stay in place
Bohmann, Kristine & Carøe, C., 2021. 3 p.Research output: Contribution to conference › Conference abstract for conference › Research › peer-review
- Published
Metagenomics: A viable tool for reconstructing herbivore diet
Chua, Physilia, Crampton-Platt, A., Lammers, Y., Alsos, I. G., Boessenkool, S. & Bohmann, Kristine, 2021, In: Molecular Ecology Resources. 21, 7, p. 2249-2263Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Towards the extended barcode concept: Generating DNA reference data through genome skimming of danish plants
Chua, Physilia, Leerhøi, Frederik, Arfaoui, Emilia Marie Rolander, Margaryan, Ashot, Noer, Christina, Richter, S. R., Restrup, M. E., Bruun, Hans Henrik, Hartvig, Ida, Coissac, E., Boessenkool, S., Alsos, I. G. & Bohmann, Kristine, 2021, 38 p. (bioRxiv).Research output: Working paper › Preprint › Research
- Published
Molecular dietary analyses of western capercaillies (Tetrao urogallus) reveal a diverse diet
Chua, Physilia, Lammers, Y., Menoni, E., Ekrem, T., Bohmann, Kristine, Boessenkool, S. & Alsos, I. G., 2021, In: Environmental DNA. 3, 6, p. 1156-1171 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA metabarcoding reveals that African leopard diet varies between habitats
Havmøller, Rasmus Worsøe, Jacobsen, N. S., Havmøller, Linnea Worsøe, Rovero, F., Scharff, Nikolaj & Bohmann, Kristine, 2021, In: African Journal of Ecology. 59, 1, p. 37-50 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Mitochondrial genomes of Danish vertebrate species generated for the national DNA reference database, DNAmark
Margaryan, Ashot, Noer, Christina, Richter, S. R., Restrup, M. E., Bülow‐hansen, J. L., Leerhøi, Frederik, Arfaoui, Emilia Marie Rolander, Gopalakrishnan, Shyam, Carøe, C., Gilbert, M Thomas P & Bohmann, Kristine, 2021, In: Environmental DNA. 3, 2, p. 472-480Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Biodiversity Soup II: A bulk-sample metabarcoding pipeline emphasizing error reduction
Yang, C., Bohmann, Kristine, Wang, X., Cai, W., Wales, N., Ding, Z., Gopalakrishnan, Shyam & Yu, D. W., 2021, In: Methods in Ecology and Evolution. 12, 7, p. 1252-1264 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2020
- Published
Beyond DNA barcoding: The unrealized potential of genome skim data in sample identification
Bohmann, Kristine, Mirarab, S., Bafna, V. & Gilbert, M Thomas P, 2020, In: Molecular Ecology. 29, 14, p. 2521-2534Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Tagsteady: A metabarcoding library preparation protocol to avoid false assignment of sequences to samples
Carøe, C. & Bohmann, Kristine, 2020, In: Molecular Ecology Resources. 20, 6, p. 1620-1631 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An appetite for pests: Synanthropic insectivorous bats exploit cotton pest irruptions and consume various deleterious arthropods
Cohen, Y., Bar-David, S., Nielsen, M., Bohmann, Kristine & Korine, C., 2020, In: Molecular Ecology. 29, 6, p. 1185-1198 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DNA-Based Arthropod Diversity Assessment in Amazonian Iron Mine Lands Show Ecological Succession Towards Undisturbed Reference Sites
Lynggaard, Christina Islas, Yu, D. W., Oliveira, G., Caldeira, C. F., Ramos, S. J., Ellegaard, M. R., Gilbert, M Thomas P, Gastauer, M. & Bohmann, Kristine, 2020, In: Frontiers in Ecology and Evolution. 8, 15 p., 590976.Research output: Contribution to journal › Journal article › Research › peer-review
- 2019
- Published
Promises and pitfalls of using high-throughput sequencing for diet analysis
Alberdi, Antton, Aizpurua Arrieta, Ostaizka, Bohmann, Kristine, Gopalakrishnan, Shyam, Lynggaard, Christina Islas, Nielsen, M. & Gilbert, M Thomas P, Mar 2019, In: Molecular Ecology Resources. 19, 2, p. 327-348Research output: Contribution to journal › Review › Research › peer-review
- Published
Use of emerging complete organelle DNA reference database in the diet analysis of the herbivorous wood grouse, western capercaillies (Tetrao urogallus)
Chua, Physilia, Boessenkool, S., Alsos, I. G., Ekrem, T., Crampton-Platt, A. & Bohmann, Kristine, 2019.Research output: Contribution to conference › Poster › Research
- Published
Using metabarcoding to compare the suitability of two blood-feeding leech species for sampling mammalian diversity in North Borneo
Drinkwater, R., Schnell, I. B., Bohmann, Kristine, Bernard, H., Veron, G., Clare, E., Gilbert, M Thomas P & Rossiter, S. J., 2019, In: Molecular Ecology Resources. 19, 1, p. 105-117Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Vertebrate diversity revealed by metabarcoding of bulk arthropod samples from tropical forests
Lynggaard, Christina Islas, Nielsen, M., Santos-Bay, Luisa, Gastauer, M., Oliveira, G. & Bohmann, Kristine, 2019, In: Environmental Engineering. 1, 4, p. 329-341Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Systematics of West African Miniopterus with the description of a new species
Monadjem, A., Shapiro, J. T., Richards, L. R., Karabulut, H., Crawley, W., Nielsen, Ida Broman, Hansen, Anders Johannes, Bohmann, Kristine & Mourier, T., Dec 2019, In: Acta Chiropterologica. 21, 2, p. 237-256Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A simplified DNA extraction protocol for unsorted bulk arthropod samples that maintains exoskeletal integrity
Nielsen, M., Gilbert, M Thomas P, Pape, Thomas & Bohmann, Kristine, 2019, In: Environmental DNA. 1, 2, p. 144-154Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Skmer: assembly-free and alignment-free sample identification using genome skims
Sarmashghi, S., Bohmann, Kristine, Gilbert, M Thomas P, Bafna, V. & Mirarab, S., 2019, In: Genome Biology. 20, 20 p., 34.Research output: Contribution to journal › Journal article › Research › peer-review
- 2018
- Published
Scrutinizing key steps for reliable metabarcoding of environmental samples
Alberdi, Antton, Aizpurua Arrieta, Ostaizka, Gilbert, M Thomas P & Bohmann, Kristine, 2018, In: Methods in Ecology and Evolution. 9, 1, p. 134-147 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Using DNA metabarcoding for simultaneous inference of common vampire bat diet and population structure
Bohmann, Kristine, Gopalakrishnan, Shyam, Nielsen, M., Santos-Bay, Luisa, Jones, G., Streicker, D. G. & Gilbert, M Thomas P, 2018, In: Molecular Ecology Resources. 18, 5, p. 1050-1063 14 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Assembly-free and alignment-free sample identification using genome skims
Sarmashghi, S., Bohmann, Kristine, Gilbert, M Thomas P, Bafna, V. & Mirarab, S., 1 Jan 2018, In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 10812, p. 276-277 2 p.Research output: Contribution to journal › Conference abstract in journal › Research › peer-review
- Published
Debugging diversity – a pan-continental exploration of the potential of terrestrial blood-feeding leeches as a vertebrate monitoring tool
Schnell, I. B., Bohmann, K., Schultze, S. E., Richter, S. R., Murray, D. C., Sinding, M. H. S., Bass, D., Cadle, J. E., Campbell, M. J., Dolch, R., Edwards, D. P., Gray, T. N. E., Hansen, T., Hoa, A. N. Q., Noer, C. L., Heise-Pavlov, S., Sander Pedersen, A. F., Ramamonjisoa, J. C., Siddall, M. E., Tilker, A. & 7 others, , 2018, In: Molecular Ecology Resources. 18, 6, p. 1282-1298 17 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat
Zepeda Mendoza, M. L., Xiong, Z., Escalera-Zamudio, M., Runge, A. K. W., Thézé, J., Streicker, D., Frank, H. K., Loza-Rubio, E., Liu, S., Ryder, O. A., Castruita, J. A. S., Katzourakis, A., Pacheco, G. A., Taboada, B., Löber, U., Pybus, O. G., Li, Y., Rojas-Anaya, E., Bohmann, K., Carmona Baez, A. & 9 others, , 2018, In: Nature Ecology & Evolution. 2, 4, p. 659-668 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2017
- Published
Connecting Earth observation to high-throughput biodiversity data
Bush, A., Sollmann, R., Wilting, A., Bohmann, K., Cole, B., Balzter, H., Martius, C., Zlinszky, A., Calvignac-Spencer, S., Cobbold, C. A., Dawson, T. P., Emerson, B. C., Ferrier, S., Gilbert, T., Herold, M., Jones, L., Leendertz, F. H., Matthews, L., Millington, J. D. A., Olson, J. R. & 11 others, , 22 Jun 2017, In: Nature Ecology and Evolution. 1, 7, 0176.Research output: Contribution to journal › Review › Research › peer-review
- Published
Diet determined by next generation sequencing reveals pest consumption and opportunistic foraging by bats in macadamia orchards in South Africa
Taylor, P. J., Matamba, E., Steyn, J. N. (., Nangammbi, T., Zepeda Mendoza, M. L. & Bohmann, Kristine, Dec 2017, In: Acta Chiropterologica. 19, 2, p. 239-254 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2016
- Published
Do vertebrate gut metagenomes confer rapid ecological adaptation?
Alberdi, Antton, Aizpurua Arrieta, Ostaizka, Bohmann, Kristine, Zepeda Mendoza, M. L. & Gilbert, M Thomas P, Sep 2016, In: Trends in Ecology & Evolution. 31, 9, p. 689-699 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
First record of Vespertilio murinus from the Arabian Peninsula
Monadjem, A., Joubert, C., Richards, L., Nielsen, Ida Broman, Nielsen, M., Kjartansdóttir, K. R., Bohmann, Kristine, Mourier, T. & Hansen, Anders Johannes, 2016, In: Vespertilio. 18, p. 79-89 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
DAMe: a toolkit for the initial processing of datasets with PCR replicates of double-tagged amplicons for DNA metabarcoding analyses
Zepeda Mendoza, M. L., Bohmann, Kristine, Baez, A. C. & Gilbert, M Thomas P, 2016, In: BMC Research Notes. 9, 13 p., 255.Research output: Contribution to journal › Journal article › Research › peer-review
- 2015
- Published
Bats, Blood-Feeders and Biodiversity: Illumina Metabarcoding in Dietary Studies
Bohmann, Kristine, 2015, Natural History Museum of Denmark, Faculty of Science, University of Copenhagen. 320 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Ancient and modern environmental DNA
Pedersen, Mikkel Winther, Overballe-Petersen, S., Ermini, L., Der Sarkissian, C., Haile, James Seymour, Hellström, A. M., Spens, J., Thomsen, P. F., Bohmann, Kristine, Cappellini, Enrico, Schnell, I. B., Wales, N., Carøe, C., Campos, P., Schmidt, A. M. Z., Gilbert, M Thomas P, Hansen, Anders Johannes, Orlando, L. A. A. & Willerslev, Eske, 2015, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 370, 1660, 11 p., 20130383.Research output: Contribution to journal › Review › Research › peer-review
- Published
Tag jumps illuminated - reducing sequence-to-sample misidentifications in metabarcoding studies
Schnell, I. B., Bohmann, Kristine & Gilbert, M Thomas P, 2015, In: Molecular Ecology Resources. 15, 6, p. 1289-1303 15 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2014
- Published
Environmental DNA for wildlife biology and biodiversity monitoring
Bohmann, Kristine, Evans, A., Gilbert, M Thomas P, Carvalho, G. R., Creer, S., Knapp, M., Yu, D. W. & de Bruyn, M., 2014, In: Trends in Ecology & Evolution. 29, 6, p. 358-367 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Second generation sequencing and morphological faecal analysis reveal unexpected foraging behaviour by Myotis nattereri (Chiroptera, Vespertilionidae) in winter
Hope, P. R., Bohmann, Kristine, Gilbert, M Thomas P, Zepeda Mendoza, M. L., Razgour, O. & Jones, G., 2014, In: Frontiers in Zoology. 11, 15 p., 39.Research output: Contribution to journal › Journal article › Research › peer-review
- 2013
- Published
When bugs reveal biodiversity
Bohmann, Kristine, Schnell, I. B. & Gilbert, M Thomas P, 13 Feb 2013, In: Molecular Ecology. 22, 4, p. 909-911 3 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2012
- Published
Molossid bats in an African agro-ecosystem select sugarcane fields as foraging habitat
Noer, Christina, Dabelsteen, Torben, Bohmann, Kristine & Monadjem, A., 2012, In: African Zoology. 47, 1, p. 1-11 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- 2011
- Published
Molecular diet analysis of two African free-tailed bats (Molossidae) using high throughput sequencing
Bohmann, Kristine, Monadjem, A., Noer, Christina, Rasmussen, M., Zeale, M. R. K., Clare, E., Jones, G., Willerslev, Eske & Gilbert, M Thomas P, 2011, In: PLoS ONE. 6, 6, p. e21441 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 38014985
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Second generation sequencing and morphological faecal analysis reveal unexpected foraging behaviour by Myotis nattereri (Chiroptera, Vespertilionidae) in winter
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
335
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Using DNA metabarcoding for simultaneous inference of common vampire bat diet and population structure
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
239
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Molecular diet analysis of two African free-tailed bats (Molossidae) using high throughput sequencing
Research output: Contribution to journal › Journal article › Research › peer-review
Published