Shyam Gopalakrishnan
Associate Professor
- Published
The extinct Sicilian wolf shows a complex history of isolation and admixture with ancient dogs
Ciucani, M. M., Ramos-Madrigal, J., Hernández-Alonso, G., Carmagnini, A., Aninta, S. G., Sun, X., Scharff-Olsen, C. H., Lanigan, L. T., Fracasso, I., Clausen, C. G., Aspi, J., Kojola, I., Baltrūnaitė, L., Balčiauskas, L., Moore, J., Åkesson, M., Saarma, U., Hindrikson, M., Hulva, P., Bolfíková, B. Č. & 19 others, , 2023, In: iScience. 26, 8, 22 p., 107307.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Evolutionary history of the extinct Sardinian dhole
Ciucani, M. M., Jensen, J. K., Sinding, M. S., Smith, O., Lucenti, S. B., Rosengren, E., Rook, L., Tuveri, C., Arca, M., Cappellini, Enrico, Galaverni, M., Randi, E., Guo, C., KU, thw266, Sicheritz-Pontén, Thomas, Dalén, L., Gilbert, M Thomas P & Gopalakrishnan, Shyam, 2021, In: Current Biology. 31, 24, p. 5571-5579.e6 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient genomes from Iceland reveal the making of a human population
Ebenesersdóttir, S. S., Sandoval Velasco, M., Gunnarsdóttir, E. D., Jagadeesan, A., Guðmundsdóttir, V. B., Thordardóttir, E. L., Einarsdóttir, M. S., Moore, K. H. S., Sigurðsson, Á., Magnusdóttir, D. N., Jonsson, H., Snorradóttir, S., Hovig, E., Møller, P., Kockum, I., Olsson, T., Alfredsson, L., Hansen, T. F., Werge, T., Cavalleri, G. L. & 10 others, , 2018, In: Science. 360, 6392, p. 1028-1032 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Dealing with dimensionality: the application of machine learning to multi-omics data
Feldner-Busztin, D., Nisantzis, P. F., Edmunds, S. J., Boza, G., Racimo, Fernando, Gopalakrishnan, Shyam, Limborg, Morten Tønsberg, Lahti, L. & de Polavieja, G. G., 2023, In: Bioinformatics. 39, 2, 8 p., btad021.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Modern Siberian dog ancestry was shaped by several thousand years of Eurasian-wide trade and human dispersal
Feuerborn, T. R., Carmagnini, A., Losey, R. J., Nomokonova, T., Askeyev, A., Askeyev, I., Askeyev, O., Antipina, E. E., Appelt, M., Bachura, O. P., Beglane, F., Bradley, D. G., Daly, K. G., Gopalakrishnan, S., Gregersen, K. M., Guo, C., Gusev, A. V., Jones, C., Kosintsev, P. A., Kuzmin, Y. V. & 17 others, , 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 39, e2100338118.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Multi-omic detection of Mycobacterium leprae in archaeological human dental calculus
Fotaki, Anna Katerina, Denham, S. D., Mackie, Meaghan, Iraeta Orbegozo, Miren, Mylopotamitaki, Dorothea, Gopalakrishnan, Shyam, Sicheritz-Pontén, Thomas, Olsen, Jesper Velgaard, Cappellini, Enrico, KU, thw266, Christophersen, A., Gilbert, M Thomas P & Vågene, Åshild Joanne, 2020, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 375, 1812, 10 p., 20190584.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Pervasive Phylogenomic Incongruence Underlies Evolutionary Relationships in Eyebrights (Euphrasia, Orobanchaceae)
Garrett, P., Becher, H., Gussarova, G., dePamphilis, C. W., Ness, R. W., Gopalakrishnan, Shyam & Twyford, A. D., 2022, In: Frontiers in Plant Science. 13, 16 p., 869583.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Adapting Genotyping-by-Sequencing and Variant Calling for Heterogeneous Stock Rats
Gileta, A. F., Gao, J., Chitre, A. S., Bimschleger, H., St Pierre, C. L., Gopalakrishnan, Shyam & Palmer, A. A., 2020, In: G3: Genes, Genomes, Genetics (Bethesda). 10, 7, p. 2195-2205 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
The population genomic legacy of the second plague pandemic
Gopalakrishnan, S., Ebenesersdóttir, S. S., Lundstrøm, I. K. C., Turner-Walker, G., Moore, K. H. S., Luisi, P., Margaryan, A., Martin, M. D., Ellegaard, M. R., Magnússon, Ó., Sigurðsson, Á., Snorradóttir, S., Magnúsdóttir, D. N., Laffoon, J. E., van Dorp, L., Liu, X., Moltke, I., Ávila-Arcos, M. C., Schraiber, J. G., Rasmussen, S. & 40 others, , 2022, In: Current Biology. 32, 21, p. 4743-4751.e6Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Interspecific Gene Flow Shaped the Evolution of the Genus Canis
Gopalakrishnan, S., Sinding, M. H. S., Ramos-Madrigal, J., Niemann, J., Samaniego Castruita, J. A., Vieira, F. G., Carøe, C., Montero, M. D. M., Kuderna, L., Serres, A., González-Basallote, V. M., Liu, Y. H., Wang, G. D., Marques-Bonet, T., Mirarab, S., Fernandes, C., Gaubert, P., Koepfli, K. P., Budd, J., Rueness, E. K. & 7 others, , 2018, In: Current Biology. 28, 21, p. 3441-3449Research output: Contribution to journal › Journal article › Research › peer-review
ID: 140603020
Most downloads
-
476
downloads
Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
335
downloads
Using DNA metabarcoding for simultaneous inference of common vampire bat diet and population structure
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
287
downloads
The wolf reference genome sequence (Canis lupus lupus) and its implications for Canis spp. population genomics
Research output: Contribution to journal › Journal article › Research › peer-review
Published