Tom Gilbert

Tom Gilbert

Professor

Member of:

    ORCID: 0000-0002-5805-7195

    Publication year:
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    26 - 50 out of 442Page size: 25
    1. 2023
    2. Published

      Uncovering neutral and adaptive genomic differentiation among European perch with brackish water and freshwater origin in the western Baltic Sea region

      Skovrind, Mikkel, Antunes Pacheco, George, Christensen, E. A. F., Gopalakrishnan, Shyam, Fietz, K., Holm-Hansen, T. H., Vieira, Filipe Garrett, Krag, M. A., Carl, Henrik, Gilbert, M Thomas P, Olsen, Morten Tange & Møller, Peter Rask, 2023, In: Fisheries Research. 268, 11 p., 106846.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      Hvad er hologenomik?

      Spile, M. B., Gilbert, M Thomas P & Noer, Christina, 2023, In: Kaskelot. 245, p. 12-18

      Research output: Contribution to journal › Journal article › Communication

    4. Published

      Ancient DNA reveals genetic admixture in China during tiger evolution

      Sun, X., Liu, Y. C., Tiunov, M. P., Gimranov, D. O., Zhuang, Y., Han, Y., Driscoll, C. A., Pang, Y., Li, C., Pan, Y., Velasco, M. S., Gopalakrishnan, S., Yang, R. Z., Li, B. G., Jin, K., Xu, X., Uphyrkina, O., Huang, Y., Wu, X. H., Gilbert, M. T. P. & 3 others, O’Brien, S. J., Yamaguchi, N. & Luo, S., 2023, In: Nature Ecology and Evolution. 7, 11, p. 1914-1929 29 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      Historic Sampling of a Vanishing Beast: Population Structure and Diversity in the Black Rhinoceros

      Sánchez-Barreiro, F., Westbury, Binia De Cahsan, Westbury, Michael Vincent, Sun, Xin, Margaryan, Ashot, Fontsere, Claudia, Bruford, M. W., Russo, I. M., Kalthoff, D. C., Sicheritz-Pontén, Thomas, Petersen, Bent, Dalén, L., KU, thw266, Marquès-Bonet, T., Gilbert, M Thomas P & Moodley, Y., 2023, In: Molecular Biology and Evolution. 40, 9, 19 p., msad180.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      On the origin and evolution of RNA editing in metazoans

      Zhang, P., Zhu, Y., Guo, Q., Li, J., Zhan, X., Yu, H., Xie, N., Tan, H., Lundholm, Nina, Garcia-Cuetos, L., Martin, M. D., Subirats, M. A., Su, Y., Ruiz-Trillo, I., Martindale, M. Q., Yu, J., Gilbert, M Thomas P, KU, thw266 & Li, Q., 2023, In: Cell Reports. 42, 2, 22 p., 112112.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      The Founding Feathers: The true ancestry of the domestic Barbary Dove

      van Grouw, H., Hernández-Alonso, G., Cavill, Emily Louisa & Gilbert, M Thomas P, 2023, In: Bulletin of the British Ornithologists' Club. 143, 2, p. 153-171 19 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. 2022
    9. Published

      Disentangling host–microbiota complexity through hologenomics

      Alberdi, Antton, Andersen, Sandra Breum, Limborg, Morten Tønsberg, Dunn, Rob & Gilbert, M Thomas P, 2022, In: Nature Reviews Genetics. 23, 5, p. 281-297 17 p.

      Research output: Contribution to journal › Review › Research › peer-review

    10. Published

      Grey wolf genomic history reveals a dual ancestry of dogs

      Bergström, A., Stanton, D. W. G., Taron, U. H., Frantz, L., Sinding, M. H. S., Ersmark, E., Pfrengle, S., Cassatt-Johnstone, M., Lebrasseur, O., Girdland-Flink, L., Fernandes, D. M., Ollivier, M., Speidel, L., Gopalakrishnan, S., Westbury, M. V., Ramos-Madrigal, J., Feuerborn, T. R., Reiter, E., Gretzinger, J., Münzel, S. C. & 61 others, Swali, P., Conard, N. J., Carøe, C., Haile, James Seymour, Linderholm, A., Androsov, S., Barnes, I., Baumann, C., Benecke, N., Bocherens, H., Brace, S., Carden, R. F., Drucker, D. G., Fedorov, S., Gasparik, M., Germonpré, M., Grigoriev, S., Groves, P., Hertwig, S. T., Ivanova, V. V., Janssens, L., Jennings, R. P., Kasparov, A. K., Kirillova, I. V., Kurmaniyazov, I., Kuzmin, Y. V., Kosintsev, P. A., Lázničková-Galetová, M., Leduc, C., Nikolskiy, P., Nussbaumer, M., O’Drisceoil, C., Orlando, L., Outram, A., Pavlova, E. Y., Perri, A. R., Pilot, M., Pitulko, V. V., Plotnikov, V. V., Protopopov, A. V., Rehazek, A., Sablin, M., Seguin-Orlando, A., Storå, J., Verjux, C., Zaibert, V. F., Zazula, G., Crombé, P., Hansen, Anders Johannes, Willerslev, Eske, Leonard, J. A., Götherström, A., Pinhasi, R., Schuenemann, V. J., Hofreiter, M., Gilbert, M Thomas P, Shapiro, B., Larson, G., Krause, J., Dalén, L. & Skoglund, P., 2022, In: Nature. 607, 7918, p. 313-320

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. Published

      Uncovering the genomic basis of an extraordinary plant invasion

      Bieker, V. C., Battlay, P., Petersen, B., Sun, X., Wilson, J., Brealey, J. C., Bretagnolle, F., Nurkowski, K., Lee, C., Barreiro, F. S., Owens, G. L., Lee, J. Y., Kellner, F. L., van Boheeman, L., Gopalakrishnan, S., Gaudeul, M., Mueller-Schaerer, H., Lommen, S., Karrer, G., Chauvel, B. & 8 others, Sun, Y., Kostantinovic, B., Dalén, L., Poczai, P., Rieseberg, L. H., Gilbert, M Thomas P, Hodgins, K. A. & Martin, M. D., 2022, In: Science Advances. 8, 34, 18 p., eabo5115.

      Research output: Contribution to journal › Journal article › Research › peer-review

    12. Published

      Conservation genomics of the endangered Seychelles Magpie-Robin (Copsychus sechellarum): a unique insight into the history of a precious endemic bird

      Cavill, Emily Louisa, Gopalakrishnan, Shyam, Puetz, Lara Christine, Ribeiro, Â. M., Mak, Sarah Siu Tze, Rodrigues da Fonseca, Rute Andreia, Antunes Pacheco, George, Dunlop, B., Accouche, W., Shah, N., Zora, A., Calabrese, L., Genner, M., Jones, G., Guo, C., KU, thw266 & Gilbert, M Thomas P, 2022, In: Ibis. 164, 2, p. 396-410 15 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. Published

      To bee, or not to bee? One leg is the question

      Cavill, Emily Louisa, Liu, S., Zhou, X. & Gilbert, M Thomas P, 2022, In: Molecular Ecology Resources. 22, 5, p. 1868-1874 7 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    14. Published

      The genomic basis of the plant island syndrome in Darwin’s giant daisies

      Cerca, J., Petersen, B., Lazaro-Guevara, J. M., Rivera-Colón, A., Birkeland, S., Vizueta, J., Li, S., Li, Q., Loureiro, J., Kosawang, C., Díaz, P. J., Rivas-Torres, G., Fernández-Mazuecos, M., Vargas, P., McCauley, R. A., Petersen, G., Santos-Bay, L., Wales, N., Catchen, J. M., Machado, D. & 9 others, Nowak, M. D., Suh, A., Sinha, N. R., Nielsen, Lene Rostgaard, Seberg, Ole, Gilbert, M Thomas P, Leebens-Mack, J. H., Rieseberg, L. H. & Martin, M. D., 2022, In: Nature Communications. 13, 13 p., 3729.

      Research output: Contribution to journal › Journal article › Research › peer-review

    15. Published

      Genomic insights into the secondary aquatic transition of penguins

      Cole, T. L., Zhou, C., Fang, M., Pan, H., Ksepka, D. T., Fiddaman, S. R., Emerling, C. A., Thomas, D. B., Bi, X., Fang, Q., Ellegaard, M. R., Feng, S., Smith, A. L., Heath, T. A., Tennyson, A. J. D., Borboroglu, P. G., Wood, J. R., Hadden, P. W., Grosser, S., Bost, C. A. & 20 others, Cherel, Y., Mattern, T., Hart, T., Sinding, Mikkel Holger Strander, Shepherd, L. D., Phillips, R. A., Quillfeldt, P., Masello, J. F., Bouzat, J. L., Ryan, P. G., Thompson, D. R., Ellenberg, U., Dann, P., Miller, G., Dee Boersma, P., Zhao, R., Gilbert, M Thomas P, Yang, H., Zhang, D. & KU, thw266, 2022, In: Nature Communications. 13, 13 p., 3912.

      Research output: Contribution to journal › Journal article › Research › peer-review

    16. Published

      Ancient proteins resolve controversy over the identity of Genyornis eggshell

      Demarchi, B., Stiller, Josefin, Grealy, A., Mackie, Meaghan, Deng, Y., Gilbert, M Thomas P, Clarke, J., Legendre, L. J., Boano, R., Sicheritz-Pontén, Thomas, Magee, J., KU, thw266, Bunce, M., Collins, Matthew James & Miller, G., 2022, In: PNAS. 119, 43, 9 p., e2109326119.

      Research output: Contribution to journal › Journal article › Research › peer-review

    17. Published

      Genome-wide re-sequencing reveals the adaptive potential of European ash (Fraxinus excelsior)

      Doonan, J., Budde, K. B., Lobo, A., Kosawang, C., Verbylaite, R., Pliura, A., Ulaszewski, B., Thomas, K., Konrad, H., Jørgensen, H. J. L., Seegmüller, S., Liziniewicz, M., Cleary, M., Nemesio-Gorriz, M., Fussi, B., Kirisits, T., Gilbert, M. T. P., Martin, M., Heuertz, M., Kjær, E. D. & 1 others, Nielsen, L. R., 2022, 7th IUFRO International Workshop on the Genetics of Tree-Parasite Interactions in Forestry: Book of abstracts: GTPI 2022. IUFRO, p. 49 1 p.

      Research output: Chapter in Book/Report/Conference proceeding › Conference abstract in proceedings › Research

    18. Published

      Genetic load and adaptive potential of a recovered avian species that narrowly avoided extinction

      Femerling Romero, Maria Georgette, Oosterhout, C. V., Feng, S., Bristol, R. M., KU, thw266, Groombridge, J., Gilbert, M Thomas P & Morales Villegas, Hernan Eduardo, 2022, bioRxiv, 23 p.

      Research output: Working paper › Preprint › Research

    19. Published

      The Australian dingo is an early offshoot of modern breed dogs

      Field, M. A., Yadav, S., Dudchenko, O., Esvaran, M., Rosen, B. D., Skvortsova, K., Edwards, R. J., Keilwagen, J., Cochran, B. J., Manandhar, B., Bustamante, S., Rasmussen, J. A., Melvin, R. G., Chernoff, B., Omer, A., Colaric, Z., Chan, E. K. F., Minoche, A. E., Smith, T. P. L., Gilbert, M. T. P. & 5 others, Bogdanovic, O., Zammit, R. A., Thomas, T., Aiden, E. L. & Ballard, J. W. O., 2022, In: Science Advances. 8, 16, 14 p., eabm5944.

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. Published

      The era of reference genomes in conservation genomics

      Formenti, G., Theissinger, K., Fernandes, C., Bista, I., Bombarely, A., Bleidorn, C., Ciofi, C., Crottini, A., Godoy, J. A., Höglund, J., Malukiewicz, J., Mouton, A., Oomen, R. A., Paez, S., Palsbøll, P. J., Pampoulie, C., Ruiz-López, M. J., Svardal, H., Theofanopoulou, C., de Vries, J. & 8 others, Waldvogel, A. M., KU, thw266, Mazzoni, C. J., Jarvis, E., Bálint, M., Gilbert, M Thomas P, tsr259, tsr259 & European Reference Genome Atlas (ERGA) Consortium, E. R. G. A. (. C., 2022, In: Trends in Ecology and Evolution. 37, 3, p. 197-202 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Published

      Species-specific traits mediate avian demographic responses under past climate change

      Germain, Ryan Ross, Feng, S., Chen, G., Graves, G. R., Tobias, J. A., Rahbek, Carsten, Lei, F., Fjeldså, Jon, Hosner, Peter Andrew, Gilbert, M Thomas P, KU, thw266 & Nogues, David Bravo, 2022, bioRxiv, 24 p.

      Research output: Working paper › Preprint › Research

    22. Published

      The population genomic legacy of the second plague pandemic

      Gopalakrishnan, S., Ebenesersdóttir, S. S., Lundstrøm, I. K. C., Turner-Walker, G., Moore, K. H. S., Luisi, P., Margaryan, A., Martin, M. D., Ellegaard, M. R., Magnússon, Ó., Sigurðsson, Á., Snorradóttir, S., Magnúsdóttir, D. N., Laffoon, J. E., van Dorp, L., Liu, X., Moltke, I., Ávila-Arcos, M. C., Schraiber, J. G., Rasmussen, S. & 40 others, Juan, D., Gelabert, P., de-Dios, T., Fotaki, Anna Katerina, Iraeta Orbegozo, Miren, Vågene, Åshild Joanne, Denham, S. D., Christophersen, A., Stenøien, H. K., Vieira, Filipe Garrett, Liu, Shanlin, Günther, T., Kivisild, T., Moseng, O. G., Skar, B., Cheung, C., Sandoval-Velasco, Marcela, Wales, N., Schroeder, Hannes, Campos, P. F., Guðmundsdóttir, V. B., Sicheritz-Pontén, Thomas, Petersen, Bent, Halgunset, J., Gilbert, E., Cavalleri, G. L., Hovig, E., Kockum, I., Olsson, T., Alfredsson, L., Hansen, Thomas Folkmann, Werge, Thomas, Willerslev, Eske, Balloux, F., Marques-Bonet, T., Lalueza-Fox, C., Nielsen, Rasmus, Stefánsson, K., Helgason, A. & Gilbert, M Thomas P, 2022, In: Current Biology. 32, 21, p. 4743-4751.e6

      Research output: Contribution to journal › Journal article › Research › peer-review

    23. Published

      Travel Tales of a Worldwide Weed: Genomic Signatures of Plantago major L. Reveal Distinct Genotypic Groups With Links to Colonial Trade Routes

      Iwanycki Ahlstrand, N., Gopalakrishnan, S., Vieira, F. G., Bieker, V. C., Meudt, H. M., Dunbar-Co, S., Rothfels, C. J., Martinez-Swatson, K. A., Maldonado, C., Hassemer, G., Shipunov, A., Bowers, M. D., Gardner, E., Xu, M., Ghorbani, A., Amano, M., Grace, O. M., Pringle, J. S., Bishop, M., Manzanilla, V. & 18 others, Cotrim, H., Blaney, S., Zubov, D., Choi, H., Yesil, Y., Bennett, B., Vimolmangkang, S., El-Seedi, H. R., Staub, P. O., Li, Z., Boldbaatar, D., Hislop, M., Caddy, L. J., Muasya, A. M., Saslis-Lagoudakis, C. H., Gilbert, M Thomas P, Zerega, N. J. C. & Rønsted, Nina, 2022, In: Frontiers in Plant Science. 13, 16 p., 838166.

      Research output: Contribution to journal › Journal article › Research › peer-review

    24. Published

      Ancient and historical DNA in conservation policy

      Jensen, E. L., Díez-del-Molino, D., Gilbert, M Thomas P, Bertola, Laura, Borges, F., Cubric-Curik, V., de Navascués, M., Frandsen, P., Heuertz, M., Hvilsom, C., Jiménez-Mena, B., Miettinen, A., Moest, M., Chrzanová Pecnerová, Patrícia, Barnes, I. & Vernesi, C., 2022, In: Trends in Ecology and Evolution. 37, 5, p. 420-429 10 p.

      Research output: Contribution to journal › Review › Research › peer-review

    25. Published

      Enriching captivity conditions with natural elements does not prevent the loss of wild-like gut microbiota but shapes its compositional variation in two small mammals

      Koziol, Adam Leslie, Larrañaga, Iñaki Odriozola, Jessen, Lasse Nyholm, Leonard, Aoife Mary, San Jose, C., Pauperio, J., Ferreira, C., Hansen, Anders Johannes, Aizpurua Arrieta, Ostaizka, Gilbert, M Thomas P & Alberdi, Antton, 2022, In: MicrobiologyOpen. 11, 5, 19 p., e1318.

      Research output: Contribution to journal › Journal article › Research › peer-review

    26. Published

      The Earth BioGenome Project 2020: Starting the clock

      Lewin, H. A., Richards, S., Aiden, E. L., Allende, M. L., Archibald, J. M., Bálint, M., Barker, K. B., Baumgartner, B., Belov, K., Bertorelle, G., Blaxter, M. L., Cai, J., Caperello, N. D., Carlson, K., Castilla-Rubio, J. C., Chaw, S. M., Chen, L., Childers, A. K., Coddington, J. A., Conde, D. A. & 65 others, Corominas, M., Crandall, K. A., Crawford, A. J., DiPalma, F., Durbin, R., Ebenezer, T. E., Edwards, S. V., Fedrigo, O., Flicek, P., Formenti, G., Gibbs, R. A., Gilbert, M Thomas P, Goldstein, M. M., Graves, J. M., Greely, H. T., Grigoriev, I. V., Hackett, K. J., Hall, N., Haussler, D., Helgen, K. M., Hogg, C. J., Isobe, S., Jakobsen, K. S., Janke, A., Jarvis, E. D., Johnson, W. E., Jones, S. J. M., Karlsson, E. K., Kersey, P. J., Kim, J. H., Kress, W. J., Kuraku, S., Lawniczak, M. K. N., Leebens-Mack, J. H., Li, X., Lindblad-Toh, K., Liu, X., Lopez, J. V., Marques-Bonet, T., Mazard, S., Mazet, J. A. K., Mazzoni, C. J., Myers, E. W., O’Neill, R. J., Paez, S., Park, H., Robinson, G. E., Roquet, C., Ryder, O. A., Sabir, J. S. M., Shaffer, H. B., Shank, T. M., Sherkow, J. S., Soltis, P. S., Tang, B., Tedersoo, L., Uliano-Silva, M., Wang, K., Wei, X., Wetzer, R., Wilson, J. L., Xu, X., Yang, H., Yoder, A. D. & KU, thw266, 2022, In: PNAS. 119, 4, 7 p., e2115635118.

      Research output: Contribution to journal › Review › Research › peer-review

    27. Published

      Probing the genomic limits of de-extinction in the Christmas Island rat

      Lin, J., Duchene, David, Carøe, C., Smith, O., Ciucani, M. M., Niemann, Jonas, Richmond, D., Greenwood, A. D., MacPhee, R., KU, thw266, Gopalakrishnan, Shyam & Gilbert, M Thomas P, 2022, In: Current Biology. 32, 7, p. 1650-1656.e3

      Research output: Contribution to journal › Journal article › Research › peer-review

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    ID: 12980