Tom Gilbert

Tom Gilbert

Professor

Member of:


    1. 2019
    2. Published

      Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits

      Chen, L., Qin, Q., Jiang, Y., Wang, K., Lin, Z., Li, Z., Bibi, F., Yang, Y., Wang, J., Nie, W., Su, W., Liu, G., Li, Q., Fu, W., Pan, X., Liu, C., Yang, J., Zhang, C., Yin, Y., Wang, Y. & 32 others, Zhao, Y., Zhang, C., Wang, Z., Qin, Y., Liu, W., Wang, B., Ren, Y., Zhang, R., Zeng, Y., Rodrigues da Fonseca, Rute Andreia, Wei, B., Li, R., Wan, W., Zhao, R., Zhu, W., Wang, Y., Duan, S., Gao, Y., Zhang, Y. E., Chen, C., Hvilsom, C., Epps, C. W., Chemnick, L. G., Doug, Y., Mirarab, S., Siegismund, Hans Redlef, Ryder, O. A., Gilbert, M Thomas P, Lewin, H. A., KU, thw266, Heller, Rasmus & Wang, W., 2019, In: Science. 364, 6446, p. 1152-

      Research output: Contribution to journalJournal articleResearchpeer-review

    3. Published

      Mitogenomic evidence of close relationships between New Zealand's extinct giant raptors and small-sized Australian sister-taxa

      Knapp, M., Thomas, J. E., Haile, James Seymour, Prost, S., Ho, S. Y. W., Dussex, N., Cameron-Christie, S., Kardailsky, O., Barnett, R., Bunce, M., Gilbert, M Thomas P & Scofield, R. P., 2019, In: Molecular Phylogenetics and Evolution. 134, p. 122-128

      Research output: Contribution to journalJournal articleResearchpeer-review

    4. Published

      MobiSeq: De novo SNP discovery in model and non-model species through sequencing the flanking region of transposable elements

      Rey de la Iglesia, Alba, Gopalakrishan, S., Carøe, C., Alquezar-Planas, D. E., Nielsen, A. A., Röder, T., Pedersen, Lene Bruhn, Næsborg-Nielsen, C., Sinding, Mikkel Holger Strander, Rath, Martin Fredensborg, Li, Z., Petersen, Bent, Gilbert, M Thomas P, Bunce, M., Mourier, T. & Hansen, Anders Johannes, 2019, In: Molecular Ecology Resources. 19, 2, p. 512-525 14 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    5. Published

      Multi-omics and potential applications in wine production

      Sirén, K., Mak, Sarah Siu Tze, Fischer, U., Hansen, Lars Hestbjerg & Gilbert, M Thomas P, 2019, In: Current Opinion in Biotechnology. 56, p. 172-178

      Research output: Contribution to journalReviewResearchpeer-review

    6. Published

      Palaeogenomic insights into the origins of French grapevine diversity

      Ramos Madrigal, Jazmin, Runge, Anne Kathrine Wiborg, Bouby, L., Lacombe, T., Samaniego Castruita, J. A., Adam-Blondon, A., Figueiral, I., Hallavant, C., Schaal, C., Töpfer, R., Petersen, Bent, Sicheritz-Pontén, T., This, P., Bacilieri, R., Gilbert, M Thomas P & Wales, N., 2019, In: Nature Plants. 5, 6, p. 595-603 9 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    7. Published

      Parallel adaptation of rabbit populations to myxoma virus

      Alves, J. M., Carneiro, M., Cheng, J. Y., Matos, A. L. D., Rahman, M. M., Loog, L., Campos, P. F., Wales, N., Eriksson, A., Manica, A., Strive, T., Graham, S. C., Afonso, S., Bell, D. J., Belmont, L., Day, J. P., Fuller, S. J., Marchandeau, S., Palmer, W. J., Queney, G. & 8 others, Surridge, A. K., Vieira, Filipe Garrett, McFadden, G., Nielsen, Rasmus, Gilbert, M Thomas P, Esteves, P. J., Ferrand, N. & Jiggins, F. M., 2019, In: Science. 363, 6433

      Research output: Contribution to journalJournal articleResearchpeer-review

    8. Published

      Postglacial Colonization of Northern Coastal Habitat by Bottlenose Dolphins: a Marine Leading-Edge Expansion?

      Nykänen, M., Kaschner, K., Dabin, W., Brownlow, A., Davison, N. J., Deaville, R., Garilao, C., Kesner-Reyes, K., Gilbert, M Thomas P, Penrose, R., Islas-Villanueva, V., Wales, N., Ingram, S. N., Rogan, E., Louis, Marie Georgette Yolande J & Foote, A. D., 2019, In: The Journal of Heredity. 110, 6, p. 662-674

      Research output: Contribution to journalJournal articleResearchpeer-review

    9. Published

      Progress for research of grape and wine culture in Georgia, the South Caucasus

      Maghradze, D., Aslanishvili, A., Mdinaradze, I., Tkemaladze, D., Mekhuzla, L., Lordkipanidze, D., Jalabadze, M., Kvavadze, E., Rusishvili, N., Mcgovern, P., This, P., Bacilieri, R., Failla, O., Cola, G., Mariani, L., Toffolatti, S. L., Lorenzis, G. D., Bianco, P. A., Quaglino, F., Wales, N. & 11 others, Gilbert, M Thomas P, Bouby, L., Kazeli, T., Ujmajuridze, L., Mamasakhlisashili, L., Batiuk, S., Graham, A., Boaretto, E., Cheishvili, A., Davitashvili, A. L. & Aurand, J. (ed.), 2019. 10 p.

      Research output: Contribution to conferencePaperResearchpeer-review

    10. Published

      Skmer: assembly-free and alignment-free sample identification using genome skims

      Sarmashghi, S., Bohmann, Kristine, Gilbert, M Thomas P, Bafna, V. & Mirarab, S., 2019, In: Genome Biology. 20, 20 p., 34.

      Research output: Contribution to journalJournal articleResearchpeer-review

    11. Published

      Specialized sledge dogs accompanied Inuit dispersal across the North American Arctic

      Ameen, C., Feuerborn, T. R., Brown, S. K., Linderholm, A., Hulme-Beaman, A., Lebrasseur, O., Sinding, M-H. S., Lounsberry, Z. T., Lin, A. T., Appelt, M., Bachmann, L., Betts, M., Britton, K., Darwent, J., Dietz, R., Fredholm, M., Gopalakrishnan, S., Goriunova, O. I., Grønnow, B., Haile, J. & 39 others, Hallsson, J. H., Harrison, R., Heide-Jørgensen, M. P., Knecht, R., Losey, R. J., Masson-MacLean, E., McGovern, T. H., McManus-Fry, E., Meldgaard, Morten, Midtdal, Å., Moss, M. L., Nikitin, I. G., Nomokonova, T., Pálsdóttir, A. H., Perri, A., Popov, A. N., Rankin, L., Reuther, J. D., Sablin, M., Schmidt, A. L., Shirar, S., Smiarowski, K., Sonne, C., Stiner, M. C., Vasyukov, M., West, C. F., Ween, G. B., Wennerberg, S. E., Wiig, Ø., Woollett, J., Dalén, L., Hansen, Anders Johannes, Gilbert, M Thomas P, Sacks, B. N., Frantz, L., Larson, G., Dobney, K., Darwent, C. M. & Evin, A., 2019, In: Proceedings. Biological sciences. 286, 1916, p. 20191929

      Research output: Contribution to journalJournal articleResearchpeer-review

    12. Published

      Taxonomic and Functional Characterization of the Microbial Community During Spontaneous in vitro Fermentation of Riesling Must

      Sirén, K., Mak, Sarah Siu Tze, Melkonian, C., Carøe, C., Swiegers, J. H., Molenaar, D., Fischer, U. & Gilbert, M Thomas P, 2019, In: Frontiers in Microbiology. 10, 17 p., 697.

      Research output: Contribution to journalJournal articleResearchpeer-review

    13. Published

      The Genomic Footprints of the Fall and Recovery of the Crested Ibis

      Feng, S., Fang, Q., Barnett, R., Li, C., Han, S., Kuhlwilm, M., Zhou, L., Pan, H., Deng, Y., Chen, G., Gamauf, A., Woog, F., Prys-Jones, R., Marques-Bonet, T., Gilbert, M Thomas P & KU, thw266, 2019, In: Current Biology. 29, 2, p. 340-349, e1-e7

      Research output: Contribution to journalJournal articleResearchpeer-review

    14. Published

      The Vertebrate TLR Supergene Family Evolved Dynamically by Gene Gain/Loss and Positive Selection Revealing a Host-Pathogen Arms Race in Birds

      Khan, I., Maldonado, E., Silva, L., Almeida, D., Johnson, W. E., O'Brien, S. J., KU, thw266, Jarvis, E. D., Gilbert, M Thomas P & Antunes, A., 2019, In: Diversity. 11, 8, 25 p., 131.

      Research output: Contribution to journalJournal articleResearchpeer-review

    15. Published

      The discovery of Neotropical Lepidosira (Collembola, Entomobryidae) and its systematic position

      Nunes, R. C., Godeiro, N. N., Antunes Pacheco, George, Liu, Shanlin, Gilbert, M Thomas P, Alvarez-Valin, F., Zhang, F. & Bellini, B. C., 2019, In: Zoologica Scripta. 48, 6, p. 783-800

      Research output: Contribution to journalJournal articleResearchpeer-review

    16. Published

      The genetic origins of Saint Helena’s liberated Africans

      Sandoval-Velasco, Marcela, Jagadeesan, A., Ávila-Arcos, M. C., Gopalakrishnan, Shyam, Ramos Madrigal, Jazmin, Moreno Mayar, J. Víctor, Renaud, Gabriel, Cruz-Dávalos, D. I., Johannesdóttir, E., Watson, J., Robson-Brown, K., Pearson, A., Helgason, A., Gilbert, M Thomas P & Schroeder, Hannes, 2019, bioRxiv, 16 p.

      Research output: Working paperPreprintResearch

    17. Published

      Using metabarcoding to compare the suitability of two blood-feeding leech species for sampling mammalian diversity in North Borneo

      Drinkwater, R., Schnell, I. B., Bohmann, Kristine, Bernard, H., Veron, G., Clare, E., Gilbert, M Thomas P & Rossiter, S. J., 2019, In: Molecular Ecology Resources. 19, 1, p. 105-117

      Research output: Contribution to journalJournal articleResearchpeer-review

    18. 2018
    19. Published

      Multiproxy evidence highlights a complex evolutionary legacy of maize in South America

      Kistler, L., Maezumi, S. Y., Gregorio De Souza, J., Przelomska, N. A. S., Malaquias Costa, F., Smith, O., Loiselle, H., Ramos Madrigal, Jazmin, Wales, N., Ribeiro, E. R., Morrison, R. R., Grimaldo, C., Prous, A. P., Arriaza, B., Gilbert, M Thomas P, De Oliveira Freitas, F. & Allaby, R. G., 14 Dec 2018, In: Science. 362, 6420, p. 1309-1313

      Research output: Contribution to journalJournal articleResearchpeer-review

    20. Published

      Ancient DNA analysis of Scandinavian medieval drinking horns and the horn of the last aurochs bull

      Bro-Jørgensen, M. H., Carøe, C., Vieira, Filipe Garrett, Nestor, S., Hallström, A., Gregersen, K. M., Etting, V., Gilbert, M Thomas P & Sinding, Mikkel Holger Strander, 1 Nov 2018, In: Journal of Archaeological Science. 99, p. 47-54 8 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    21. Published

      Testosterone in ancient hair from an extinct species

      Koren, L., Matas, D., Pečnerová, P., Dalén, L., Tikhonov, A., Gilbert, M Thomas P, Wynne-edwards, K. E. & Geffen, E., 1 Nov 2018, In: Special Papers in Palaeontology. 61, 6, p. 797-802

      Research output: Contribution to journalJournal articleResearchpeer-review

    22. Published

      Pan-genome Analysis of Ancient and Modern Salmonella enterica Demonstrates Genomic Stability of the Invasive Para C Lineage for Millennia

      Zhou, Z., Lundstrøm, I. K. C., Tran-Dien, A., Duchêne, S., Alikhan, N., Sergeant, M. J., Langridge, G., Fotaki, Anna Katerina, Nair, S., Stenøien, H. K., Hamre, S. S., Casjens, S., Christophersen, A., Quince, C., Thomson, N. R., Weill, F., Ho, S. Y. W., Gilbert, M Thomas P & Achtman, M., 6 Aug 2018, In: Current Biology. 28, 15, p. 2420-2429 20 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    23. Published

      Whole-Genome Sequencing of African Dogs Provides Insights into Adaptations against Tropical Parasites

      Liu, Y., Wang, L., Xu, T., Guo, X., Li, Y., Yin, T., Yang, H., Hu, Y., Adeola, A. C., Sanke, O. J., Otecko, N. O., Wang, M., Ma, Y., Charles, O. S., Sinding, M. S., Gopalakrishnan, S., Alfredo Samaniego, J., Hansen, A. J., Fernandes, C., Gaubert, P. & 10 others, Budd, J., Dawuda, P. M., Knispel Rueness, E., Jiang, L., Zhai, W., Gilbert, M Thomas P, Peng, M., Qi, X., Wang, G. & Zhang, Y., 1 Feb 2018, In: MOLECULAR BIOLOGY AND EVOLUTION . 35, 2, p. 287-298

      Research output: Contribution to journalLetterResearchpeer-review

    24. Published

      Assembly-free and alignment-free sample identification using genome skims

      Sarmashghi, S., Bohmann, Kristine, Gilbert, M Thomas P, Bafna, V. & Mirarab, S., 1 Jan 2018, In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 10812, p. 276-277 2 p.

      Research output: Contribution to journalConference abstract in journalResearchpeer-review

    25. Published

      Agriculture shapes the trophic niche of a bat preying on multiple pest arthropods across Europe: Evidence from DNA metabarcoding

      Aizpurua Arrieta, Ostaizka, Budinski, I., Georgiakakis, P., Gopalakrishnan, Shyam, Ibanez, C., Mata, V., Rebelo, H., Russo, D., Szodoray-Paradi, F., Zhelyazkova, V., Zrncic, V., Gilbert, M Thomas P & Alberdi, Antton, 2018, In: Molecular Ecology. 27, 3, p. 815-825 11 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    26. Published

      Ancient genomes from Iceland reveal the making of a human population

      Ebenesersdóttir, S. S., Sandoval Velasco, M., Gunnarsdóttir, E. D., Jagadeesan, A., Guðmundsdóttir, V. B., Thordardóttir, E. L., Einarsdóttir, M. S., Moore, K. H. S., Sigurðsson, Á., Magnusdóttir, D. N., Jonsson, H., Snorradóttir, S., Hovig, E., Møller, P., Kockum, I., Olsson, T., Alfredsson, L., Hansen, T. F., Werge, T., Cavalleri, G. L. & 10 others, Gilbert, E., Lalueza-Fox, C., Walser, J. ,. I., Kristjánsdóttir, S., Gopalakrishnan, Shyam, Árnadóttir, L., Magnússon, Ó. Þ., Gilbert, M Thomas P, Stefánsson, K. & Helgason, A., 2018, In: Science. 360, 6392, p. 1028-1032 5 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    27. Published

      Applied Hologenomics: Feasibility and Potential in Aquaculture

      Limborg, Morten Tønsberg, Alberdi, Antton, Kodama, M., Roggenbuck, M., Kristiansen, Karsten & Gilbert, M Thomas P, 2018, In: Trends in Biotechnology. 36, 3, p. 252-264 13 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    28. Published

      Bat biology, genomes, and the Bat1K project: to generate chromosome-level genomes for all living bat species

      Teeling, E. C., Vernes, S. C., Dávalos, L. M., Ray, D. A., Gilbert, M Thomas P & Myers, E., 2018, In: Annual Review of Animal Biosciences. 6, p. 23-46 24 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    29. Published

      Debugging diversity – a pan-continental exploration of the potential of terrestrial blood-feeding leeches as a vertebrate monitoring tool

      Schnell, I. B., Bohmann, K., Schultze, S. E., Richter, S. R., Murray, D. C., Sinding, M. H. S., Bass, D., Cadle, J. E., Campbell, M. J., Dolch, R., Edwards, D. P., Gray, T. N. E., Hansen, T., Hoa, A. N. Q., Noer, C. L., Heise-Pavlov, S., Sander Pedersen, A. F., Ramamonjisoa, J. C., Siddall, M. E., Tilker, A. & 7 others, Traeholt, C., Wilkinson, N., Woodcock, P., Yu, D. W., Bertelsen, Mads Frost, Bunce, M. & Gilbert, M Thomas P, 2018, In: Molecular Ecology Resources. 18, 6, p. 1282-1298 17 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    30. Published

      Earth BioGenome Project: sequencing life for the future of life

      Lewin, H. A., Robinson, G. E., Kress, W. J., Baker, W. J., Coddington, J., Crandall, K. A., Durbin, R., Edwards, S. V., Forest, F., Gilbert, M. T. P., Goldstein, M. M., Grigoriev, I. V., Hackett, K. J., Haussler, D., Jarvis, E. D., Johnson, W. E., Patrinos, A., Richards, S., Castilla-Rubio, J. C., van Sluys, M-A. & 4 others, Soltis, P. S., Xu, X., Yang, H. & KU, thw266, 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 17, p. 4325-4333 9 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    31. Published

      Greenland sled dogs at risk of extinction

      Sonne, C., Langebæk, Rikke, Dietz, R., Andersen-Ranberg, E., Houser, G., Hansen, Anders Johannes, Sinding, Mikkel Holger Strander, Olsen, Morten Tange, Egevang, C., Gilbert, M Thomas P & Meldgaard, Morten, 2018, In: Science. 360, 6393, p. 1080-1080

      Research output: Contribution to journalLetterResearchpeer-review

    32. Published

      Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat

      Zepeda Mendoza, M. L., Xiong, Z., Escalera-Zamudio, M., Runge, A. K. W., Thézé, J., Streicker, D., Frank, H. K., Loza-Rubio, E., Liu, S., Ryder, O. A., Castruita, J. A. S., Katzourakis, A., Pacheco, G. A., Taboada, B., Löber, U., Pybus, O. G., Li, Y., Rojas-Anaya, E., Bohmann, K., Carmona Baez, A. & 9 others, Arias, C. F., Liu, S., Greenwood, A. D., Bertelsen, Mads Frost, White, N. E., Bunce, M., KU, thw266, Sicheritz-Ponten, T. & Gilbert, M Thomas P, 2018, In: Nature Ecology & Evolution. 2, 4, p. 659-668 10 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    33. Published

      Improved Genome Assembly and Annotation for the Rock Pigeon (Columba livia)

      Holt, C., Campbell, M., Keays, D. A., Edelman, N., Kapusta, A., Maclary, E., Domyan, E. T., Suh, A., Warren, W. C., Yandell, M., Gilbert, M Thomas P & Shapiro, M. D., 2018, In: G3: Genes, Genomes, Genetics (Bethesda). 8, 5, p. 1391-1398 8 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    34. Published

      Mind the gut: genomic insights to population divergence and gut microbial composition of two marine keystone species

      Fietz, K., Hintze, C. O. R., Skovrind, Mikkel, Nielsen, Tue Kjærgaard, Limborg, Morten Tønsberg, Krag, M. A., Palsboll, P. J., Hansen, L. H., Møller, Peter Rask & Gilbert, M Thomas P, 2018, In: Microbiome. 6, 16 p., 82.

      Research output: Contribution to journalJournal articleResearchpeer-review

    35. Published

      No longer locally extinct? Tracing the origins of a lion (Panthera leo) living in Gabon

      Barnett, R., Sinding, M. S., Vieira, Filipe Garrett, Mendoza, M. L. Z., Bonnet, M., Araldi, A., Kienast, I., Zambarda, A., Yamaguchi, N., Henschel, P. & Gilbert, M Thomas P, 2018, In: Conservation Genetics. 19, 3, p. 611-618 8 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    36. Published

      Population genomics of grey wolves and wolf-like canids in North America

      Sinding, Mikkel Holger Strander, Gopalakrishan, S., Vieira, Filipe Garrett, Samaniego Castruita, J. A., Raundrup, K., Heide-Jørgensen, M. P., Meldgaard, Morten, Petersen, Bent, Sicheritz-Ponten, T., Mikkelsen, J. B., Marquard-Petersen, U., Dietz, R., Sonne, C., Dalén, L., Bachmann, L., Wiig, Ø., Hansen, Anders Johannes & Gilbert, M Thomas P, 2018, In: PLOS Genetics. 14, 11, 23 p., e1007745.

      Research output: Contribution to journalJournal articleResearchpeer-review

    37. Published

      Protective role of the vulture facial skin and gut microbiomes aid adaptation to scavenging

      Zepeda Mendoza, M. L., Roggenbuck, M., Manzano Vargas, K., Hansen, L. H., Brunak, Søren, Gilbert, M Thomas P & Sicheritz-Pontén, Thomas, 2018, In: Acta Veterinaria Scandinavica. 60, 1, p. 1-19 19 p., 61.

      Research output: Contribution to journalJournal articleResearchpeer-review

    38. Published

      Quantifying Temporal Genomic Erosion in Endangered Species

      Diez-del-Molino, D., Sanchez Barreiro, F., Barnes, I., Gilbert, M Thomas P & Dalen, L., 2018, In: Trends in Ecology & Evolution. 33, 3, p. 176-185 10 p.

      Research output: Contribution to journalReviewResearchpeer-review

    39. Published

      Scrutinizing key steps for reliable metabarcoding of environmental samples

      Alberdi, Antton, Aizpurua Arrieta, Ostaizka, Gilbert, M Thomas P & Bohmann, Kristine, 2018, In: Methods in Ecology and Evolution. 9, 1, p. 134-147 14 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    40. Published

      Single-tube library preparation for degraded DNA

      Carøe, C., Gopalakrishnan, Shyam, Vinner, Lasse, Mak, Sarah Siu Tze, Sinding, Mikkel Holger Strander, Samaniego, J. A., Wales, N., Sicheritz-Ponten, T. & Gilbert, M Thomas P, 2018, In: Methods in Ecology and Evolution. 9, 2, p. 410-419 10 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    41. Published
    42. Published

      The evolutionary history of dogs in the Americas

      Leathlobhair, M. N., Perri, A. R., Irving-Pease, E. K., Witt, K. E., Linderholm, A., Haile, J., Lebrasseur, O., Ameen, C., Blick, J., Boyko, A. R., Brace, S., Cortes, Y. N., Crockford, S. J., Devault, A., Dimopoulos, E. A., Eldridge, M., Enk, J., Gopalakrishnan, S., Gori, K., Grimes, V. & 30 others, Guiry, E., Hansen, Anders Johannes, Hulme-Beaman, A., Johnson, J., Kitchen, A., Kasparov, A. K., Kwon, Y., Nikolskiy, P. A., Lope, C. P., Manin, A., Martin, T., Meyer, M., Myers, K. N., Omura, M., Rouillard, J., Pavlova, E. Y., Sciulli, P., Sinding, M. S., Strakova, A., Ivanova, V. V., Widga, C., Willerslev, Eske, Pitulko, V. V., Barnes, I., Gilbert, M Thomas P, Dobney, K. M., Malhi, R. S., Murchison, E. P., Larson, G. & Frantz, L. A. F., 2018, In: Science. 361, 6397, p. 81-85 6 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    43. Published

      Using DNA metabarcoding for simultaneous inference of common vampire bat diet and population structure

      Bohmann, Kristine, Gopalakrishnan, Shyam, Nielsen, M., Santos-Bay, Luisa, Jones, G., Streicker, D. G. & Gilbert, M Thomas P, 2018, In: Molecular Ecology Resources. 18, 5, p. 1050-1063 14 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    44. 2017
    45. Published

      Natural selection shaped the rise and fall of passenger pigeon genomic diversity

      Murray, G. G. R., Soares, A. E. R., Novak, B. J., Schaefer, N. K., Cahill, J. A., Baker, A. J., Demboski, J. R., Doll, A., Rodrigues da Fonseca, R. A., Fulton, T. L., Gilbert, T., Heintzman, P. D., Letts, B., McIntosh, G., O'Connell, B. L., Peck, M., Pipes, M-L., Rice, E. S., Santos, K. M., Sohrweide, A. G. & 4 others, Vohr, S. H., Corbett-Detig, R. B., Green, R. E. & Shapiro, B., 17 Nov 2017, In: Science. 358, 6365, p. 951-954 4 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    46. Published

      Evolutionary history of Saber-toothed cats based on ancient mitogenomics

      Paijmans, J. L. A., Barnett, R., Gilbert, M Thomas P, Zepeda Mendoza, M. L., Reumer, J. W. F., de Vos, J., Zazula, G., Nagel, D., Baryshnikov, G. F., Leonard, J. A., Rohland, N., Westbury, Michael Vincent, Barlow, A. & Hofreiter, M., 6 Nov 2017, In: Current Biology. 27, 21, p. 3330-3336 7 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    47. Published

      Genome-wide ancestry and demographic history of African-descendant Maroon communities from French Guiana and Suriname

      Fortes-Lima, C., Gessain, A., Ruiz-Linares, A., Bortolini, M., Migot-Nabias, F., Bellis, G., Moreno Mayar, J. Víctor, Restrepo, B. N., Rojas, W., Avendaño-Tamayo, E., Bedoya, G., Orlando, L. A. A., Salas, A., Helgason, A., Gilbert, M Thomas P, Sikora, Martin, Schroeder, Hannes & Dugoujon, J., 2 Nov 2017, In: American Journal of Human Genetics. 101, 5, p. 725-736 12 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    48. Published

      An expanded mammal mitogenome dataset from Southeast Asia

      Mohd Salleh, F. B., Ramos Madrigal, Jazmin, Peñaloza, F., Liu, Shanlin, Sinding, Mikkel Holger Strander, Patel, R. P., Martins, R., Lenz, D., Fickel, J., Roos, C., Shamsir, M. S., Azman, M. S., Lim, B. K., Rossiter, S. J., Wilting, A. & Gilbert, M Thomas P, Aug 2017, In: GigaScience. 6, 8, p. 1–8 8 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    49. Published

      Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing

      Mak, Sarah Siu Tze, Gopalakrishnan, Shyam, Carøe, C., Geng, C., Liu, Shanlin, Sinding, Mikkel Holger Strander, Kuderna, L. F. K., Zhang, W., Fu, S., Vieira, Filipe Garrett, Germonpré, M., Bocherens, H., Fedorov, S., Petersen, Bent, Sicheritz-Pontén, T., Marques-Bonet, T., KU, thw266, Jiang, H. & Gilbert, M Thomas P, Aug 2017, In: GigaScience. 6, 8, p. 1–13 13 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    50. Published

      Connecting Earth observation to high-throughput biodiversity data

      Bush, A., Sollmann, R., Wilting, A., Bohmann, K., Cole, B., Balzter, H., Martius, C., Zlinszky, A., Calvignac-Spencer, S., Cobbold, C. A., Dawson, T. P., Emerson, B. C., Ferrier, S., Gilbert, T., Herold, M., Jones, L., Leendertz, F. H., Matthews, L., Millington, J. D. A., Olson, J. R. & 11 others, Ovaskainen, O., Raffaelli, D., Reeve, R., Rödel, M., Rodgers, T. W., Snape, S., Visseren-Hamakers, I., Vogler, A. P., White, P. C. L., Wooster, M. J. & Yu, D. W., 22 Jun 2017, In: Nature Ecology and Evolution. 1, 7, 0176.

      Research output: Contribution to journalReviewResearchpeer-review

    51. Published

      An ‛aukward’ tale: a genetic approach to discover the whereabouts of the last Great Auks

      Thomas, J. E., Carvalho, G. R., Haile, James Seymour, Martin, M. D., Samaniego Castruita, J. A., Niemann, Jonas, Sinding, Mikkel Holger Strander, Sandoval-Velasco, Marcela, Rawlence, N. J., Fuller, E., Fjeldså, Jon, Hofreiter, M., Stewart, J. R., Gilbert, M Thomas P & Knapp, M., 15 Jun 2017, In: Genes. 8, 6, 12 p., 164.

      Research output: Contribution to journalJournal articleResearchpeer-review

    52. Published

      Eggshell palaeogenomics: palaeognath evolutionary history revealed through ancient nuclear and mitochondrial DNA from Madagascan elephant bird (Aepyornis sp.) eggshell

      Grealy, A., Phillips, M., Miller, G., Gilbert, M Thomas P, Rouillard, J., Lambert, D., Bunce, M. & Haile, J., Apr 2017, In: Molecular Phylogenetics and Evolution. 109, p. 151-163 13 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    53. Published

      Molecular clocks indicate turnover and diversification of modern coleoid cephalopods during the Mesozoic Marine Revolution

      Tanner, A. R., Fuchs, D., Winkelmann, I. E. H., Gilbert, M Thomas P, Pankey, M. S., Oliveira Ribeiro, Â. M., Kocot, K. M., Halanych, K. M., Oakley, T. H., Rodrigues da Fonseca, Rute Andreia, Pisani, D. & Vinther, J., 15 Mar 2017, In: Proceedings of the Royal Society B: Biological Sciences. 284, 1850, 7 p., 20162818.

      Research output: Contribution to journalJournal articleResearchpeer-review

    ID: 12980