Patterns and causes of species richness: a general simulation model for macroecology

Research output: Contribution to journalJournal articleResearchpeer-review

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Patterns and causes of species richness: a general simulation model for macroecology. / Gotelli, Nicholas J; Anderson, Marti J; Arita, Hector T; Chao, Anne; Colwell, Robert K; Connolly, Sean R; Currie, David J; Dunn, Robert R; Graves, Gary R; Green, Jessica L; Grytnes, John-Arvid; Jiang, Yi-Huei; Jetz, Walter; Kathleen Lyons, S; McCain, Christy M; Magurran, Anne E; Rahbek, Carsten; Rangel, Thiago F L V B; Soberón, Jorge; Webb, Campbell O; Willig, Michael R.

In: Ecology Letters, Vol. 12, No. 9, 2009, p. 873-86.

Research output: Contribution to journalJournal articleResearchpeer-review

Harvard

Gotelli, NJ, Anderson, MJ, Arita, HT, Chao, A, Colwell, RK, Connolly, SR, Currie, DJ, Dunn, RR, Graves, GR, Green, JL, Grytnes, J-A, Jiang, Y-H, Jetz, W, Kathleen Lyons, S, McCain, CM, Magurran, AE, Rahbek, C, Rangel, TFLVB, Soberón, J, Webb, CO & Willig, MR 2009, 'Patterns and causes of species richness: a general simulation model for macroecology', Ecology Letters, vol. 12, no. 9, pp. 873-86. https://doi.org/10.1111/j.1461-0248.2009.01353.x

APA

Gotelli, N. J., Anderson, M. J., Arita, H. T., Chao, A., Colwell, R. K., Connolly, S. R., Currie, D. J., Dunn, R. R., Graves, G. R., Green, J. L., Grytnes, J-A., Jiang, Y-H., Jetz, W., Kathleen Lyons, S., McCain, C. M., Magurran, A. E., Rahbek, C., Rangel, T. F. L. V. B., Soberón, J., ... Willig, M. R. (2009). Patterns and causes of species richness: a general simulation model for macroecology. Ecology Letters, 12(9), 873-86. https://doi.org/10.1111/j.1461-0248.2009.01353.x

Vancouver

Gotelli NJ, Anderson MJ, Arita HT, Chao A, Colwell RK, Connolly SR et al. Patterns and causes of species richness: a general simulation model for macroecology. Ecology Letters. 2009;12(9):873-86. https://doi.org/10.1111/j.1461-0248.2009.01353.x

Author

Gotelli, Nicholas J ; Anderson, Marti J ; Arita, Hector T ; Chao, Anne ; Colwell, Robert K ; Connolly, Sean R ; Currie, David J ; Dunn, Robert R ; Graves, Gary R ; Green, Jessica L ; Grytnes, John-Arvid ; Jiang, Yi-Huei ; Jetz, Walter ; Kathleen Lyons, S ; McCain, Christy M ; Magurran, Anne E ; Rahbek, Carsten ; Rangel, Thiago F L V B ; Soberón, Jorge ; Webb, Campbell O ; Willig, Michael R. / Patterns and causes of species richness: a general simulation model for macroecology. In: Ecology Letters. 2009 ; Vol. 12, No. 9. pp. 873-86.

Bibtex

@article{02d77560328811df8ed1000ea68e967b,
title = "Patterns and causes of species richness: a general simulation model for macroecology",
abstract = "Understanding the causes of spatial variation in species richness is a major research focus of biogeography and macroecology. Gridded environmental data and species richness maps have been used in increasingly sophisticated curve-fitting analyses, but these methods have not brought us much closer to a mechanistic understanding of the patterns. During the past two decades, macroecologists have successfully addressed technical problems posed by spatial autocorrelation, intercorrelation of predictor variables and non-linearity. However, curve-fitting approaches are problematic because most theoretical models in macroecology do not make quantitative predictions, and they do not incorporate interactions among multiple forces. As an alternative, we propose a mechanistic modelling approach. We describe computer simulation models of the stochastic origin, spread, and extinction of species' geographical ranges in an environmentally heterogeneous, gridded domain and describe progress to date regarding their implementation. The output from such a general simulation model (GSM) would, at a minimum, consist of the simulated distribution of species ranges on a map, yielding the predicted number of species in each grid cell of the domain. In contrast to curve-fitting analysis, simulation modelling explicitly incorporates the processes believed to be affecting the geographical ranges of species and generates a number of quantitative predictions that can be compared to empirical patterns. We describe three of the 'control knobs' for a GSM that specify simple rules for dispersal, evolutionary origins and environmental gradients. Binary combinations of different knob settings correspond to eight distinct simulation models, five of which are already represented in the literature of macroecology. The output from such a GSM will include the predicted species richness per grid cell, the range size frequency distribution, the simulated phylogeny and simulated geographical ranges of the component species, all of which can be compared to empirical patterns. Challenges to the development of the GSM include the measurement of goodness of fit (GOF) between observed data and model predictions, as well as the estimation, optimization and interpretation of the model parameters. The simulation approach offers new insights into the origin and maintenance of species richness patterns, and may provide a common framework for investigating the effects of contemporary climate, evolutionary history and geometric constraints on global biodiversity gradients. With further development, the GSM has the potential to provide a conceptual bridge between macroecology and historical biogeography.",
author = "Gotelli, {Nicholas J} and Anderson, {Marti J} and Arita, {Hector T} and Anne Chao and Colwell, {Robert K} and Connolly, {Sean R} and Currie, {David J} and Dunn, {Robert R} and Graves, {Gary R} and Green, {Jessica L} and John-Arvid Grytnes and Yi-Huei Jiang and Walter Jetz and {Kathleen Lyons}, S and McCain, {Christy M} and Magurran, {Anne E} and Carsten Rahbek and Rangel, {Thiago F L V B} and Jorge Sober{\'o}n and Webb, {Campbell O} and Willig, {Michael R}",
note = "Keywords: Biodiversity; Ecology; Models, Biological",
year = "2009",
doi = "10.1111/j.1461-0248.2009.01353.x",
language = "English",
volume = "12",
pages = "873--86",
journal = "Ecology Letters",
issn = "1461-023X",
publisher = "Wiley-Blackwell",
number = "9",

}

RIS

TY - JOUR

T1 - Patterns and causes of species richness: a general simulation model for macroecology

AU - Gotelli, Nicholas J

AU - Anderson, Marti J

AU - Arita, Hector T

AU - Chao, Anne

AU - Colwell, Robert K

AU - Connolly, Sean R

AU - Currie, David J

AU - Dunn, Robert R

AU - Graves, Gary R

AU - Green, Jessica L

AU - Grytnes, John-Arvid

AU - Jiang, Yi-Huei

AU - Jetz, Walter

AU - Kathleen Lyons, S

AU - McCain, Christy M

AU - Magurran, Anne E

AU - Rahbek, Carsten

AU - Rangel, Thiago F L V B

AU - Soberón, Jorge

AU - Webb, Campbell O

AU - Willig, Michael R

N1 - Keywords: Biodiversity; Ecology; Models, Biological

PY - 2009

Y1 - 2009

N2 - Understanding the causes of spatial variation in species richness is a major research focus of biogeography and macroecology. Gridded environmental data and species richness maps have been used in increasingly sophisticated curve-fitting analyses, but these methods have not brought us much closer to a mechanistic understanding of the patterns. During the past two decades, macroecologists have successfully addressed technical problems posed by spatial autocorrelation, intercorrelation of predictor variables and non-linearity. However, curve-fitting approaches are problematic because most theoretical models in macroecology do not make quantitative predictions, and they do not incorporate interactions among multiple forces. As an alternative, we propose a mechanistic modelling approach. We describe computer simulation models of the stochastic origin, spread, and extinction of species' geographical ranges in an environmentally heterogeneous, gridded domain and describe progress to date regarding their implementation. The output from such a general simulation model (GSM) would, at a minimum, consist of the simulated distribution of species ranges on a map, yielding the predicted number of species in each grid cell of the domain. In contrast to curve-fitting analysis, simulation modelling explicitly incorporates the processes believed to be affecting the geographical ranges of species and generates a number of quantitative predictions that can be compared to empirical patterns. We describe three of the 'control knobs' for a GSM that specify simple rules for dispersal, evolutionary origins and environmental gradients. Binary combinations of different knob settings correspond to eight distinct simulation models, five of which are already represented in the literature of macroecology. The output from such a GSM will include the predicted species richness per grid cell, the range size frequency distribution, the simulated phylogeny and simulated geographical ranges of the component species, all of which can be compared to empirical patterns. Challenges to the development of the GSM include the measurement of goodness of fit (GOF) between observed data and model predictions, as well as the estimation, optimization and interpretation of the model parameters. The simulation approach offers new insights into the origin and maintenance of species richness patterns, and may provide a common framework for investigating the effects of contemporary climate, evolutionary history and geometric constraints on global biodiversity gradients. With further development, the GSM has the potential to provide a conceptual bridge between macroecology and historical biogeography.

AB - Understanding the causes of spatial variation in species richness is a major research focus of biogeography and macroecology. Gridded environmental data and species richness maps have been used in increasingly sophisticated curve-fitting analyses, but these methods have not brought us much closer to a mechanistic understanding of the patterns. During the past two decades, macroecologists have successfully addressed technical problems posed by spatial autocorrelation, intercorrelation of predictor variables and non-linearity. However, curve-fitting approaches are problematic because most theoretical models in macroecology do not make quantitative predictions, and they do not incorporate interactions among multiple forces. As an alternative, we propose a mechanistic modelling approach. We describe computer simulation models of the stochastic origin, spread, and extinction of species' geographical ranges in an environmentally heterogeneous, gridded domain and describe progress to date regarding their implementation. The output from such a general simulation model (GSM) would, at a minimum, consist of the simulated distribution of species ranges on a map, yielding the predicted number of species in each grid cell of the domain. In contrast to curve-fitting analysis, simulation modelling explicitly incorporates the processes believed to be affecting the geographical ranges of species and generates a number of quantitative predictions that can be compared to empirical patterns. We describe three of the 'control knobs' for a GSM that specify simple rules for dispersal, evolutionary origins and environmental gradients. Binary combinations of different knob settings correspond to eight distinct simulation models, five of which are already represented in the literature of macroecology. The output from such a GSM will include the predicted species richness per grid cell, the range size frequency distribution, the simulated phylogeny and simulated geographical ranges of the component species, all of which can be compared to empirical patterns. Challenges to the development of the GSM include the measurement of goodness of fit (GOF) between observed data and model predictions, as well as the estimation, optimization and interpretation of the model parameters. The simulation approach offers new insights into the origin and maintenance of species richness patterns, and may provide a common framework for investigating the effects of contemporary climate, evolutionary history and geometric constraints on global biodiversity gradients. With further development, the GSM has the potential to provide a conceptual bridge between macroecology and historical biogeography.

U2 - 10.1111/j.1461-0248.2009.01353.x

DO - 10.1111/j.1461-0248.2009.01353.x

M3 - Journal article

C2 - 19702748

VL - 12

SP - 873

EP - 886

JO - Ecology Letters

JF - Ecology Letters

SN - 1461-023X

IS - 9

ER -

ID: 18692939