Positive selection on the killer whale mitogenome
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Positive selection on the killer whale mitogenome. / Foote, Andrew David; Morin, Phillip A.; Durban, John W.; Pitman, Robert L.; Wade, Paul; Willerslev, Eske; Gilbert, Tom; Rodrigues da Fonseca, Rute Andreia.
In: Biology Letters, Vol. 7, No. 1, 2011, p. 116-118.Research output: Contribution to journal › Letter › Research › peer-review
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TY - JOUR
T1 - Positive selection on the killer whale mitogenome
AU - Foote, Andrew David
AU - Morin, Phillip A.
AU - Durban, John W.
AU - Pitman, Robert L.
AU - Wade, Paul
AU - Willerslev, Eske
AU - Gilbert, Tom
AU - Rodrigues da Fonseca, Rute Andreia
PY - 2011
Y1 - 2011
N2 - Mitochondria produce up to 95 per cent of the eukaryotic cell's energy. The coding genes of the mitochondrial DNA may therefore evolve under selection owing to metabolic requirements. The killer whale, Orcinus orca, is polymorphic, has a global distribution and occupies a range of ecological niches. It is therefore a suitable organism for testing this hypothesis. We compared a global dataset of the complete mitochondrial genomes of 139 individuals for amino acid changes that were associated with radical physico-chemical property changes and were influenced by positive selection. Two such selected non-synonymous amino acid changes were found; one in each of two ecotypes that inhabit the Antarctic pack ice. Both substitutions were associated with changes in local polarity, increased steric constraints and alpha-helical tendencies that could influence overall metabolic performance, suggesting a functional change.
AB - Mitochondria produce up to 95 per cent of the eukaryotic cell's energy. The coding genes of the mitochondrial DNA may therefore evolve under selection owing to metabolic requirements. The killer whale, Orcinus orca, is polymorphic, has a global distribution and occupies a range of ecological niches. It is therefore a suitable organism for testing this hypothesis. We compared a global dataset of the complete mitochondrial genomes of 139 individuals for amino acid changes that were associated with radical physico-chemical property changes and were influenced by positive selection. Two such selected non-synonymous amino acid changes were found; one in each of two ecotypes that inhabit the Antarctic pack ice. Both substitutions were associated with changes in local polarity, increased steric constraints and alpha-helical tendencies that could influence overall metabolic performance, suggesting a functional change.
U2 - 10.1098/rsbl.2010.0638
DO - 10.1098/rsbl.2010.0638
M3 - Letter
C2 - 20810427
VL - 7
SP - 116
EP - 118
JO - Biology Letters
JF - Biology Letters
SN - 1744-9561
IS - 1
ER -
ID: 32221087