Jacob Agerbo Rasmussen
Postdoc
- 2024
- Published
Succession of microbial community composition and secondary metabolism during marine biofilm development
Bech, P. K., Jarmusch, S. A., Rasmussen, Jacob Agerbo, Limborg, Morten Tønsberg, Gram, L. & Henriksen, N. N. S. E., 2024, In: ISME communications. 20, 4Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Host-gut microbiota interactions shape parasite infections in farmed Atlantic salmon
Brealey, Jaelle, Kodama, M., Rasmussen, Jacob Agerbo, Hansen, Søren Blikdal, Santos-Bay, Luisa, Lecaudey, L. A., Hansen, M., Fjære, E., Myrmel, L. S., Madsen, L., Bernhard, A., Sveier, H., Kristiansen, Karsten, Gilbert, M Thomas P, Martin, M. D. & Limborg, Morten Tønsberg, 2024, In: mSystems. 9, 2, 29 p., e01043-23.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Ancient reindeer mitogenomes reveal island-hopping colonisation of the Arctic archipelagos
Hold, K., Lord, E., Brealey, Jaelle, Le Moullec, M., Bieker, V. C., Ellegaard, M. R., Rasmussen, Jacob Agerbo, Kellner, F. L., Guschanski, K., Yannic, G., Røed, K. H., Hansen, B. B., Dalén, L., Martin, M. D. & Dussex, N., 2024, In: Scientific Reports. 14, 14 p., 4143.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Exploring the microbial diversity of novel misos with metagenomics
Kothe, C. I., Rasmussen, Jacob Agerbo, Mak, Sarah Siu Tze, Gilbert, M Thomas P & Evans, J., 2024, In: Food Microbiology. 117, 9 p., 104372.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A zebrafish model to elucidate the impact of host genes on the microbiota
Þormar, Eirikur Andri, Rasmussen, Jacob Agerbo, Mathiessen, Heidi, Marana, Moonika Haahr, Clausen, C. G., Hansen, M., Kodama, M., Jørgensen, Louise von Gersdorff & Limborg, Morten Tønsberg, 2024, In: Environmental DNA. 6, 1, 20 p., e513.Research output: Contribution to journal › Journal article › Research › peer-review
- 2023
- Published
Adaptation to the High-Arctic island environment despite long-term reduced genetic variation in Svalbard reindeer
Dussex, N., Tørresen, O. K., van der Valk, T., Le Moullec, M., Veiberg, V., Tooming-Klunderud, A., Skage, M., Garmann-Aarhus, B., Wood, J., Rasmussen, Jacob Agerbo, Pedersen, Å. Ø., Martin, S. L. F., Røed, K. H., Jakobsen, K. S., Dalén, L., Hansen, B. B. & Martin, M. D., 2023, In: iScience. 26, 10, 16 p., 107811.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic diversity and differentiation between island and mainland populations of white-tailed eagles (Haliaeetus albicilla)
Hansen, C. C. R., Láruson, Á. J., Rasmussen, Jacob Agerbo, Ballesteros, J. A. C., Sinding, Mikkel Holger Strander, Hallgrimsson, G. T., von Schmalensee, M., Stefansson, R. A., Skarphédinsson, K. H., Labansen, A. L., Leivits, M., Sonne, C., Dietz, R., Skelmose, K., Boertmann, D., Eulaers, I., Martin, M. D., Helgason, A. S., Gilbert, M Thomas P & Pálsson, S., 2023, In: Molecular Ecology. 32, 8, p. 1925-1942 18 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Unexpected fishy microbiomes
Limborg, Morten Tønsberg, Chua, P. Y. S. & Rasmussen, Jacob Agerbo, 2023, In: Nature Reviews Microbiology. 21, 6, p. 346 1 p.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Co-diversification of an intestinal Mycoplasma and its salmonid host
Rasmussen, Jacob Agerbo, Kiilerich, P., Madhun, A. S., Waagbø, R., Lock, E. J. R., Madsen, L., Gilbert, M Thomas P, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2023, In: ISME Journal. 17, 5, p. 682-692 11 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome-resolving metagenomics reveals wild western capercaillies (Tetrao urogallus) as avian hosts for antibiotic-resistance bacteria and their interactions with the gut-virome community
Rasmussen, Jacob Agerbo & Chua, P. Y. S., 2023, In: Microbiological Research. 271, 11 p., 127372.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
An ethnographic framework for identifying dog sledding in the archaeological record
Vitale, Emma Giovanna, Rasmussen, Jacob Agerbo, Grønnow, B., Hansen, Anders Johannes, Meldgaard, Morten & Feuerborn, Tatiana Richtman, 2023, In: Journal of Archaeological Science. 159, 10 p., 105856.Research output: Contribution to journal › Journal article › Research › peer-review
- 2022
- Published
Microbiome "Inception": an Intestinal Cestode Shapes a Hierarchy of Microbial Communities Nested within the Host
Brealey, Jaelle, Lecaudey, L. A., Kodama, M., Rasmussen, Jacob Agerbo, Sveier, H., Dheilly, N. M., Martin, M. D. & Limborg, Morten Tønsberg, 2022, In: mBio. 13, 3, 14 p., e00679-22.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Taking metagenomics under the wings
Chua, Physilia & Rasmussen, Jacob Agerbo, 2022, In: Nature Reviews Microbiology. 20, 8, p. 447 1 p.Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
The Australian dingo is an early offshoot of modern breed dogs
Field, M. A., Yadav, S., Dudchenko, O., Esvaran, M., Rosen, B. D., Skvortsova, K., Edwards, R. J., Keilwagen, J., Cochran, B. J., Manandhar, B., Bustamante, S., Rasmussen, J. A., Melvin, R. G., Chernoff, B., Omer, A., Colaric, Z., Chan, E. K. F., Minoche, A. E., Smith, T. P. L., Gilbert, M. T. P. & 5 others, , 2022, In: Science Advances. 8, 16, 14 p., eabm5944.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Distinctive mitogenomic lineages within populations of White-tailed Eagles: [Inkl. Corrigendum]
Hansen, C. C. R., Baleka, S., Guðjónsdóttir, S. M., Rasmussen, Jacob Agerbo, Ballesteros, J. A. C., Hallgrimsson, G. T., Stefansson, R. A., von Schmalensee, M., Skarphedinsson, K. H., Labansen, A. L., Leivits, M., Skelmose, K., Sonne, C., Dietz, R., Boertmann, D., Eulaers, I., Martin, M. D. & Pálsson, S., 2022, In: Ornithology. 139, 2, 14 p., ukab081.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Rhizosphere bacterial communities differ among traditional maize landraces
Lund, M., Rasmussen, Jacob Agerbo, Ramos Madrigal, Jazmin, Sawers, R., Gilbert, M Thomas P & Barnes, Christopher James, 2022, In: Environmental DNA. 4, 6, p. 1241-1249 9 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A multi-omics approach unravels metagenomic and metabolic alterations of a probiotic and synbiotic additive in rainbow trout (Oncorhynchus mykiss)
Rasmussen, Jacob Agerbo, Villumsen, Kasper Rømer, Ernst, M., Hansen, M., Forberg, T., Gopalakrishnan, Shyam, Gilbert, M Thomas P, Bojesen, Anders Miki, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2022, In: Microbiome. 10, 19 p., 21.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
How salmon hooked me: Host-microbe interactions in aquaculture
Rasmussen, Jacob Agerbo, 2022, Department of Biology, Faculty of Science, University of Copenhagen. 111 p.Research output: Book/Report › Ph.D. thesis › Research
- Published
Integrative analyses of probiotics, pathogenic infections and host immune response highlight the importance of gut microbiota in understanding disease recovery in rainbow trout (Oncorhynchus mykiss)
Rasmussen, Jacob Agerbo, Villumsen, Kasper Rømer, Jørgensen, Louise von Gersdorff, Forberg, T., Zuo, S., Kania, Per, Buchmann, Kurt, Kristiansen, Karsten, Bojesen, Anders Miki & Limborg, Morten Tønsberg, 2022, In: Journal of Applied Microbiology. 132, 4, p. 3201-3216 16 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A strategic model of a host-microbe-microbe system reveals the importance of a joint host-microbe immune response to combat stress-induced gut dysbiosis
Scheuring, I., Rasmussen, Jacob Agerbo, Bozzi, D. & Limborg, Morten Tønsberg, 2022, In: Frontiers in Microbiology. 13, 12 p., 912806.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomic evidence refutes the hypothesis that the Bornean banteng is a distinct species
Sun, Xin, Ciucani, M. M., Rasmussen, Jacob Agerbo, Gilbert, M Thomas P & Sinding, Mikkel Holger Strander, 2022, In: BMC Ecology and Evolution. 22, 4 p., 110.Research output: Contribution to journal › Journal article › Research › peer-review
- 2021
- Published
Molecular parallelisms between pigmentation in the avian iris and the integument of ectothermic vertebrates
Andrade, P., Gazda, M. A., Araújo, P. M., Afonso, S., Rasmussen, Jacob Agerbo, Marques, C. I., Lopes, R. J., Gilbert, M Thomas P & Carneiro, M., 2021, In: PLOS Genetics. 17, 2, 16 p., 1009404.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Feasibility of applying shotgun metagenomic analyses to grapevine leaf, rhizosphere and soil microbiome characterisation
Azevedo-Silva, D., Rasmussen, Jacob Agerbo, Carneiro, M., Gilbert, M Thomas P & Azevedo, H., 2021, In: Australian Journal of Grape and Wine Research. 27, 4, p. 519-526 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Salmon gut microbiota correlates with disease infection status: potential for monitoring health in farmed animals
Bozzi, D., Rasmussen, Jacob Agerbo, Carøe, C., Sveier, H., Nordøy, K., Gilbert, M Thomas P & Limborg, Morten Tønsberg, 2021, In: BMC Animal Microbiome. 3, 1, 17 p., 30.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts
Rasmussen, Jacob Agerbo, Villumsen, Kasper Rømer, Duchene, David, Puetz, Lara Christine, Delmont, T. O., Sveier, H., Jørgensen, Louise von Gersdorff, Præbel, K., Martin, M. D., Bojesen, Anders Miki, Gilbert, M Thomas P, Kristiansen, Karsten & Limborg, Morten Tønsberg, 2021, In: Communications Biology. 4, 10 p., 579.Research output: Contribution to journal › Journal article › Research › peer-review
ID: 215672180
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A multi-omics approach unravels metagenomic and metabolic alterations of a probiotic and synbiotic additive in rainbow trout (Oncorhynchus mykiss)
Research output: Contribution to journal › Journal article › Research › peer-review
Published -
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eDNA‐based biomonitoring at an experimental German vineyard to characterize how management regimes shape ecosystem diversity
Research output: Contribution to journal › Journal article › Research › peer-review
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47
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Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts
Research output: Contribution to journal › Journal article › Research › peer-review
Published